Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1739 ATGAAAGAAGTGTGGAGATTCATAATATTCTGCTGCATGGTGGTAATTGGAGTCACACTAGGTCATAGTTTGTCTCTAACCAGCCAAGGTTTGACACTTGAAAAAATGAAGAAATTATTGAACTGGAATGGTGAAGGAGTCATTGATCCATGCTTTTGGTTTGGAGTGGAATGTTCTCATGGAAATATTGTGGCCTTGCACTTTGGCCAACAAGGGGATATACCATACAATAGAAAACTTCTACAAACATCAAATTCTGCCAAGAGTTTTGATCACAAAGAGAATCCTTCACCTTCATCATCACCAACACCTTCACCAGTTTCTCCATCAGAAAGTCCCTCAAATTCACCATCATTTTTTCTTCCATCACTATTAACATCACCAGAACTTTCCCCTTCACCATCATCCTCACCTTCACCTTCACCTGTGATATCACCTTCCCCTACAGTTCTATCTACACCACCACATTCTAGTTGGATTTCTGCACCTTCCCCAGCTCCATCTTCAAACCAAATGAATTCACAAAGTTCAAACCCAAAGCATCATTCTGTTGTTATATGGTCAACAGTTGGAGGATTCTCATTCCTTGTTTTGGTGTCATTCATGGTTTTCATTTGCTTCAGAAGTAGTAAGGTTGTAACTGTCAAACCTTGGACCACAGGGTTGAGTGGCCAGCTTCGAAAAGCATTTGTAACAGGTATTCCAAGTCTTAAACGAGGTGAACTCGAAGTAGCTTGTGAAGATTTCAGCAACATTATTGGTTCTCTACAAGATGAAACCATCTATAAGGGAACTCTTTCAAGTGGAGTTGAGATAGCCGTTGTATCCTCTGCCGCGACTTCATCACTAGACTGGTCAAAAAATATGCAAGCTCAGTTCCGAAAGAAGATTGAGATGTTATCAAGGTTGAACCACAAGAATTTTGTGAATCTTATTGGTTATTGTGAAGAGAATAAGCCATTCACAAGGATGATGGTTTTTGAGTATGCTCCGAATGGAACGCTGTTTGAGCATCTACATATTAGAGAAGCAGAAGAGCTAGACTGGGGAATGAGAAAGAGGATAGCTATGGGAATAGCTTACTGTCTAGACCACATGCATAATCTCACACCACCCATTTCCCACAGAAATCTGTTATCTTCTTCTATATACCTAACTGAAGATTATGCTGCTAAAATATCAGACCTTAGTTTCTGCACCGACAAAGTTGATACAAAGAACCGTTACGAAAAAACTTCAGCAGAAGAAGTAAAGGACAATGTATATAGTTTTGGTGTAATATTATTTGAGTTGATAACAGGAAAAATTCCATATGCAGTGGAAAATGGCTCTCAAACAGATTGGGCTGGAGAATATATAAGAGGACAACCATTGAGAGAGATGGTTGATACAAGGTTGAACTCTTTGAAAGATGATGAAATTGAGAAATGGTGTGAAGTGATTAACAATTGTGTAGATCTTGATCAAGAAACAAGGTCATCAATGAAAGAGATTACATCTAAATTGAAGGAGATTACTGATATGGGGCCTGATGGAGCAACTCCAAAATCATCCCCTCTTTGGTGGGCTGAAATAGAAATTATGTCTGAGGACATATGCTAA 1602 0.3901 MKEVWRFIIFCCMVVIGVTLGHSLSLTSQGLTLEKMKKLLNWNGEGVIDPCFWFGVECSHGNIVALHFGQQGDIPYNRKLLQTSNSAKSFDHKENPSPSSSPTPSPVSPSESPSNSPSFFLPSLLTSPELSPSPSSSPSPSPVISPSPTVLSTPPHSSWISAPSPAPSSNQMNSQSSNPKHHSVVIWSTVGGFSFLVLVSFMVFICFRSSKVVTVKPWTTGLSGQLRKAFVTGIPSLKRGELEVACEDFSNIIGSLQDETIYKGTLSSGVEIAVVSSAATSSLDWSKNMQAQFRKKIEMLSRLNHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIREAEELDWGMRKRIAMGIAYCLDHMHNLTPPISHRNLLSSSIYLTEDYAAKISDLSFCTDKVDTKNRYEKTSAEEVKDNVYSFGVILFELITGKIPYAVENGSQTDWAGEYIRGQPLREMVDTRLNSLKDDEIEKWCEVINNCVDLDQETRSSMKEITSKLKEITDMGPDGATPKSSPLWWAEIEIMSEDIC* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1739 533 MobiDBLite consensus disorder prediction 88 178 - -
Mtr3g1739 533 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 91 530 - -
Mtr3g1739 533 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 5 68 - -
Mtr3g1739 533 Pfam Protein tyrosine and serine/threonine kinase 254 502 IPR001245 GO:0004672|GO:0006468
Mtr3g1739 533 MobiDBLite consensus disorder prediction 150 178 - -
Mtr3g1739 533 SUPERFAMILY Protein kinase-like (PK-like) 232 502 IPR011009 -
Mtr3g1739 533 Gene3D Phosphorylase Kinase; domain 1 224 329 - -
Mtr3g1739 533 Gene3D Transferase(Phosphotransferase) domain 1 330 511 - -
Mtr3g1739 533 PANTHER PROTEIN MALE DISCOVERER 2 91 530 - -
Mtr3g1739 533 PANTHER PROTEIN MALE DISCOVERER 2 5 68 - -
Mtr3g1739 533 MobiDBLite consensus disorder prediction 112 132 - -
Mtr3g1739 533 MobiDBLite consensus disorder prediction 133 149 - -
Mtr3g1739 533 ProSiteProfiles Protein kinase domain profile. 247 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1739 Mtr-Chr3 29788905 29794627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1739 233 507 Receptor kinase-like Gene Family AT3G19300 32.997 1.26e-35 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mtr3g1739 PK_Tyr_Ser-Thr 6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1739 - - gmx:100814122 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1739 3 29788905 29794627 Mtr3g1739 3 29788905 29794627 ECH