Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1732 ATGACTGCTACAGAGATGTTGCAAACAAAAGAGGAACCGGGGTCTAAGAAATCAAACATGGTTAGACCCTTCTCTAATGGATCGTCATCAGCATTTCGACCATGGCAACCCTCTTGGATGAGCATCGGCCTTGGTAAACAAGAGGCCAGTAGAAGTGGAGTAAAAGCAACTCCACAAGCCAACACAACTAATAACATGAGTGGTGGTAGTGCATCTGCAAATGTTGGTGTTGGTGATCAAGCAACACAAAATTTGGATCCAAAGAGGCTCAAACGGATCGAAGCAAATCGAGTTTCTTCGCATAAATCGAGATTGAAAAAACTCGATTATATTGCAGATTTGGAAGAAATGGAAAAAAATTTGCAGGCTAAGTTATCTTTCCTTCGCCCACAAGTTGAAGCCTATGAAAATCAACAGCGGTTGTTGAATCTTGAACGTCACCAATTAAGACTTCAAATTGCTGTAAGAGAAAAAGAAAGGATACTTCAAGAAGTGGAGATTGAGAATAAGAGAGCTGAGGTGAATAGGCTGAGGGAGCTTGAGAAGAAACTTGTTGCTGAAGCACAAAATAAGAGATCAAATTGGAGAAGAAGCATCAAGGATAATGCAAACTGA 615 0.4065 MTATEMLQTKEEPGSKKSNMVRPFSNGSSSAFRPWQPSWMSIGLGKQEASRSGVKATPQANTTNNMSGGSASANVGVGDQATQNLDPKRLKRIEANRVSSHKSRLKKLDYIADLEEMEKNLQAKLSFLRPQVEAYENQQRLLNLERHQLRLQIAVREKERILQEVEIENKRAEVNRLRELEKKLVAEAQNKRSNWRRSIKDNAN* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1732 204 MobiDBLite consensus disorder prediction 44 81 - -
Mtr3g1732 204 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 91 106 IPR004827 GO:0003700|GO:0006355
Mtr3g1732 204 SUPERFAMILY Leucine zipper domain 88 142 IPR046347 GO:0003700|GO:0006355
Mtr3g1732 204 Gene3D - 86 148 - -
Mtr3g1732 204 PANTHER ACTIVATOR OF SPOMIN LUC3 10 190 - -
Mtr3g1732 204 Coils Coil 132 194 - -
Mtr3g1732 204 MobiDBLite consensus disorder prediction 1 32 - -
Mtr3g1732 204 MobiDBLite consensus disorder prediction 52 81 - -
Mtr3g1732 204 Pfam Basic region leucine zipper 86 137 IPR004827 GO:0003700|GO:0006355
Mtr3g1732 204 SMART brlzneu 84 148 IPR004827 GO:0003700|GO:0006355
Mtr3g1732 204 PANTHER BASIC LEUCINE ZIPPER 34 10 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1732 Mtr-Chr3 29692889 29695338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1732 51 164 bZIP Transcription Factor Family AT2G42380 36.842 2.61e-16 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr3g1732 bZIP_2 6.2e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1732 - - ccaj:109816036 117.857