Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1727 ATGGAATTCAACAAGTTTAGAATCAGAAGCTATGAGGGTCAATCAGCTGATAGAGCTCAAGTTGAAAATTTAGAGAGAAAATGTGAGGTAGGACCATCAGAAAGTGTGTTTCTCTTCACAGACACTTTGGGTGACCCCATTTGTAGGATTCGAAACAGTCCCATGTACATTATGCTGGTAGCAGAGTTTGATAATGAATTGATTGGTGTCATTCAAGGCTCTATAAAAGTTGTAACTGTTCAAGGACATCCACCAAAGGATTTGGCAAAAGTAGGGTATGTCCTAGGCTTAAGGGTATCTCCACATCATAGAAGAAAAGGCATTGGTTCAAGCCTAGTAAGAACATTAGAAGAATGGTTCATTTCCAATGATGTGGACTATGCATACATGGCAACAGAGAAAGATAATCATGCCTCAGTCAATCTCTTCATGAACAAGTTTAACTACATAAAGTTTAGGACACCATCTATTCTTGTTAATCCTGTGAACCATCACTCATTAAAAATCTCAAACAACATTGAAATATCTAGGTTAAAAATTGAACAAGCTGAATCACTCTATAGAAGATTCATGGGGTCCACAGAGTTTTTTCCTAATGATATAGGAAATATATTAAGGAATAAATTAAGTTTGGGGACATGGATGGCATGTTTTAAAGATGATATTAATATTGGACCTAATGGACAAGTGCCAAATAGTTGGGCTATGCTTAGTGTATGGAATAGTGGTGAGATATTCAAGTTAAAGATAGGAAAAGCACCTTTTTGTTGTTTGTTATACACAAAAAGTTGGTGCTTGATTGATAAAATTTTCCCATGTTTAAAATTACCTACTTTACCTGATTTCTTTAACCCTTTTGGATTTTATTTTATGTATGGTGTGTATCATGAAGGGCCATTTTCAGGGAAACTAGTGAAAGCTCTATGTCAATTTGTGCACAATATGGCTAAAGAGAGAAAAGATGAGAAGTGTAAGATTATTGTGACTGAAGTTGGAGGAAGAGATGAACTCAATCATCACATTCCACATTGGAAGTTGCTCTCATGCCCTGAAGATTTGTGGTGCATAAAGGCACTGAAAAATGAAGGACTTTCAATCAATACTTTTCATGAATTAACCAAAATCCCACCTACAAGAGCTCTTTTTGTAGACCCAAGAGAGGTTTAA 1167 0.3582 MEFNKFRIRSYEGQSADRAQVENLERKCEVGPSESVFLFTDTLGDPICRIRNSPMYIMLVAEFDNELIGVIQGSIKVVTVQGHPPKDLAKVGYVLGLRVSPHHRRKGIGSSLVRTLEEWFISNDVDYAYMATEKDNHASVNLFMNKFNYIKFRTPSILVNPVNHHSLKISNNIEISRLKIEQAESLYRRFMGSTEFFPNDIGNILRNKLSLGTWMACFKDDINIGPNGQVPNSWAMLSVWNSGEIFKLKIGKAPFCCLLYTKSWCLIDKIFPCLKLPTLPDFFNPFGFYFMYGVYHEGPFSGKLVKALCQFVHNMAKERKDEKCKIIVTEVGGRDELNHHIPHWKLLSCPEDLWCIKALKNEGLSINTFHELTKIPPTRALFVDPREV* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1727 388 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 15 143 IPR016181 -
Mtr3g1727 388 CDD NAT_SF 58 129 - -
Mtr3g1727 388 Pfam Acetyltransferase (GNAT) family 48 148 IPR000182 GO:0016407
Mtr3g1727 388 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 220 IPR000182 GO:0016407
Mtr3g1727 388 Gene3D - 14 154 - -
Mtr3g1727 388 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 388 - -
Mtr3g1727 388 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1727 Mtr-Chr3 29568072 29570105 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mtr3g1727 Acetyltransf_1 2.7e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1727 - - gmx:100799507 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1727 3 29568072 29570105 Mtr3g1727 3 29568072 29570105 ECH