Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1721 ATGCAAAACTCACCTATTCATCCAATGAACTCACTCAAAGAAATATTCCAAAACATTTTCTCAGATAATAGTAACATAATGCTTGCAGCTATCATTTCTTTACTACTAGTCATTCTCTTTGTTCTTCTTCTTCATCTTTATGCTAAATGGTTCTTAGCTCAAGCACATGCTCAAGCACAAGCTCGACGCCGCCGTCGCCGAAGAACAACTGTGACTGTCTCTGATGTCCTTGGACCTGCTAGGTTCCATCATTTCCACACATTCAACATTGAAGACTCACCTCTCTCTAGCTCACACACCAAAGGGCTTGATTCTTCTATCATTTCTTCAATTCCTATGTTTATTTATGCTGAGAAAAATGATTGTAAAGATGAAATTGAACATGAACTTGAATGTGTGATTTGTTTGAGTGGTTTTGAAGATGGTGAAATGGGAAGGTGTTTACCAAAATGTGGTCATGGTTTTCATCTTGAGTGTATTGATATGTGGTTGAGTTCACATTCTAATTGTCCTATTTGTAGAGCTTCAATTGTTGTGTTTGAGAATGATTCTTCAAGTGTTGTTGAAAATAATGGTGATGATTCTAGTATTGTTGAAATTGTGGTTGATGAAAATTCTAGTTCTGAGATTAGAGAAGGTGAACAAGGGAATGATAATGAAAGAGTGAGTGATACTGTTTCAGAAACTTCATCTTCATTGTTTGGTTGCTCTTTGAAGACAGTTTTCAGCAAAGTTTTTCCATCTTCCAATGTAAATGTTATTGAATCACAATCTTGA 777 0.3578 MQNSPIHPMNSLKEIFQNIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAQAHAQAQARRRRRRRTTVTVSDVLGPARFHHFHTFNIEDSPLSSSHTKGLDSSIISSIPMFIYAEKNDCKDEIEHELECVICLSGFEDGEMGRCLPKCGHGFHLECIDMWLSSHSNCPICRASIVVFENDSSSVVENNGDDSSIVEIVVDENSSSEIREGEQGNDNERVSDTVSETSSSLFGCSLKTVFSKVFPSSNVNVIESQS* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1721 258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 179 IPR013083 -
Mtr3g1721 258 CDD RING-H2_EL5_like 131 174 - -
Mtr3g1721 258 ProSiteProfiles Zinc finger RING-type profile. 132 174 IPR001841 -
Mtr3g1721 258 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 7 252 IPR044675 -
Mtr3g1721 258 SMART ring_2 132 173 IPR001841 -
Mtr3g1721 258 PANTHER - 7 252 - -
Mtr3g1721 258 MobiDBLite consensus disorder prediction 207 221 - -
Mtr3g1721 258 SUPERFAMILY RING/U-box 110 180 - -
Mtr3g1721 258 MobiDBLite consensus disorder prediction 207 226 - -
Mtr3g1721 258 Pfam Ring finger domain 131 174 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1721 Mtr-Chr3 29392391 29393352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1721 18 222 Rapid Response to Elicitors AT3G16720 33.810 5.12e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1721 - - lang:109329145 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1721 3 29392391 29393352 Mtr3g1721 3 29392391 29393352 ECH
Mtr3g1721 3 29392391 29393352 Mtr5g2432 5 31893565 31894675 PCT