Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1716 ATGTCTTGTTCCGTTGCAATTCCAAATTCTCCTATATTCTCTCTTTCCTCTTCCCATTACTTCACCAAAAATTGCTATATCATTTCTTCTTCCACGGATTCTCTCCCAACCTCTTCTTCTTCTTCACACTCCTCGCCGGTTTTGAAGAAAAAGAGACCTGCTAAACTTGATATACCTGTTGCTTCTCTCATTGTTGAGCTTCCACCAGCAGTACCATCTCGGTCGGCAGCGAAGGATGTTGTTGAGGTAGAAGGAGATGGGTTTTCTGTGTATTGTAAGAGAGGAAGCAGGAAGCATATGGAGGATCGTTACTCTGCTTCTCTTGATCTTCATGGACAATCTAAACAGGCATTTTTTGGCATATTTGATGGACATGGAGGTACAAAAGCTTCGGAATTCGCGGCACAGAACTTGGAAAAGAATGTGTTAGAGGAAGTAATCAGAAGAGATGAAAGTGATATTGAGGAAGCAGTGAAGCATGGTTACCTCAAAACAGATTCAGATTTCTTAAAAGAAGATCTTAATGGTGGCTCTTGCTGTGTAACAGCATTTATTAGGAATGGTAACCTTGTTGTGTCCAATGCAGGCGATTGTCGCGCTGTCATCAGTAGAGGAGGTGTTGCTGAGGCCTTAACGTCGGATCACAAACCTTCAAGGAAAGACGAAAAAGAACGAATTGAAACTCAGGGAGGATATGTAGATATGTGCCGCGGTGTTTGGAGAATCCAAGGATCTCTTGCTGTTTCAAGGAGCATTGGAGATAGACACATGAAACAATATGTGATAGCAGAACCTGAGACCAAAGTACTCAGAATTGAACCTCATCATGACTTTTTAATCTTAGCTTCAGATGGATTATGGGAAAAGGTTAGTAATCAAGAAGCTGTAGATCTTGCTGGTCCTTTATGTGTAGAGAGCAATAGACAAGGATCCTTCCAAGCTTGTAAGAAACTTGTAGATTTATCTGTATCGCGAGGCTCTATCGATGATATAAGTGTTATGATAATCAAATTACAAAACTACATTTGA 1029 0.4082 MSCSVAIPNSPIFSLSSSHYFTKNCYIISSSTDSLPTSSSSSHSSPVLKKKRPAKLDIPVASLIVELPPAVPSRSAAKDVVEVEGDGFSVYCKRGSRKHMEDRYSASLDLHGQSKQAFFGIFDGHGGTKASEFAAQNLEKNVLEEVIRRDESDIEEAVKHGYLKTDSDFLKEDLNGGSCCVTAFIRNGNLVVSNAGDCRAVISRGGVAEALTSDHKPSRKDEKERIETQGGYVDMCRGVWRIQGSLAVSRSIGDRHMKQYVIAEPETKVLRIEPHHDFLILASDGLWEKVSNQEAVDLAGPLCVESNRQGSFQACKKLVDLSVSRGSIDDISVMIIKLQNYI* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1716 342 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 3 341 - -
Mtr3g1716 342 CDD PP2Cc 87 338 IPR001932 -
Mtr3g1716 342 ProSiteProfiles PPM-type phosphatase domain profile. 87 338 IPR001932 -
Mtr3g1716 342 SUPERFAMILY PP2C-like 88 340 IPR036457 -
Mtr3g1716 342 Gene3D - 81 342 IPR036457 -
Mtr3g1716 342 SMART PP2C_4 80 336 IPR001932 -
Mtr3g1716 342 Pfam Protein phosphatase 2C 88 331 IPR001932 -
Mtr3g1716 342 PANTHER PROTEIN PHOSPHATASE 2C 3 341 IPR015655 GO:0004722|GO:0006470
Mtr3g1716 342 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1716 Mtr-Chr3 29321574 29323549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1716 1 342 PP2C-type Phosphatase Gene Family AT2G30020 56.927 1.33e-142 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1716 K17506 - gmx:100813073 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1716 3 29321574 29323549 Mtr3g1716 3 29321574 29323549 ECH
Mtr5g2417 5 31701146 31703501 Mtr3g1716 3 29321574 29323549 ECH
Mtr3g1716 3 29321574 29323549 Mtr5g2417 5 31701146 31703501 PCT