Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1675 ATGACACCAACATCACTAACACTCATTTTCTCCTTCATTTTCACCATAACCACCGTCAACAGCCTCGGCACCGCCACCACTACCGCCATCATCCACAACACCTCCACCATCTGCGGCATAGTCGCCGGTAAGCCCTACCAATACATCCAATGCTACCAAAACAAAAAACTCATTCCACCAATACTCCCCAACGTTTCATTTCAGTCCATATCCGGTGGCCGGAGCTTCTTCTGCGGCCTCCGGTCTAATGGACTCAGCCTACACTGTTGGAACACAAGGACACGGAAGTCTTTTCTCAAACCTAAAAGGGTGTATCATAGTGAAAATGTTCAGTTGAATGATGTAGCTGTTGGTGATGATCATGTTTGTGCTAGAGAGTTGCACTCTGGTGTGGTAAGGTGTTGGAGAGGTTATGGTGAAACTAATGGATTCAAGTTTCCTTCTCCTGATGAAAATTTTCGGTTTCGAAGCATTACTTGTGGTACTGGTTTTTGTTGTGGGATATTGAAGGAGAATAGTAAAGTTTTTTGTTGGGGTGTAAATGGTAAAAAGGGTGTTGAAAAAGAGATTCAGAAACAGTTTGGGAATTTATCAATGTCAACATTGGTTGCTGGTGTGTCACATGTTTGTGGTTTAACTCTTGATAAAGTTTTGGTTTGTAAAGGTGAGAAGAACAATGATTCTGGTAAGCTAAATGTTCCTTTGAATTCTGGTTCAGTTTTTTCAGGTCTTGCTTTAGGAAAAAATTTCACTTGTGGTATTAGAAAAAAGAATGGATTTGTTCTATGTTGGGGTGGTTTATTTGATAGTGGTGGTGTGAATAATCATGTGATGATGAAAAGTGTTTCTTTTGAGTCAATTGTTGCTGGTTTGGATTTTGTTTGTGGTTTGAGTATTAAAAATTTGTCTCTTATTTGTTGGGGTAATACTAATGAGGATGTTAATGTTCCATTGGGAATGATTCTTCCTGGTCCATGTGTTAGTGATTCATGTAGCACTTGTGGTGTGTATCCAAATTCTGATTTTCTTTGTCAAGGTTTTGGAAGCATTTGTTATGATTGTCGAACCGAGTTACCATTCGCGGTGCCGTTGCTACCACCATCAACATCACCACCTAAGAATCAATCTTCTAAAGGTGTTGAAGAAAAAACTAACTTGAGAGGTTGGAAATTGATGGTATTTATGATTATTGGATCAGTTGGTGCTTTTTCTGGTTTATGCACTTTTCTTTATTTTCTTATGATTGGTGCAAGAAAATTGTTAAAGGCGAAAATCGATAATTCTGTTCAACCTACAAGTAGTGAATCTGATGATGCTTATGTTGATATAGCTCCAATGCCGAATATTGGAACAACGGCGTTAAGATCTTTTTCTAGTAAAAGACATAGTTCAAGTAGATTAAGAAGTGGTTCATCTTCAAAGCAATTAGACAGAACAGAAAATTTCACATTTTGGGAGTTAGTTGCAGCTAGTGACAATTTCTCATTGGGAAATAAAATTGGTGCTGGAAGTTTTGGATGTGTTTACAAAGGGAAGTTATTAGACGGTCGTGAAGTCGCGATTAAAAGAGGCGATACAAGCTTGAAGAAGAAGAAATTCCAAGAGAAAGAAACAGCTTTTGATTCTGAGTTAACACTATTGTCAAGGCTTCATCACAAGCATTTGGTGAGACTAATTGGTTTTTGTGAGGAGAATGATGAGAGGCTTTTGGTGTATGAGTACATGAGTAATGGATCATTACATGATCATTTGCATGATAAGAATAATGTTGAAAAAAATAGTAGCATTTTAAATTCATGGAAAATGAGAATCAAAGTTGCATTAGATGCTGCAAGGGGAATTGAGTACATTCATAACTACGCGGTACCACCGATTATTCATCGAGATATTAAATCCTCAAACATACTTCTTGATTCAAAATGGAATGCTAGGGTTTCCGACTTCGGATTATCGTTAATTTGGCAAGAAACCGAACAAGATTCAATGTCGAATATAAAAGCGGTCGGAACCGTTGGTTACATAGATCCTGAGTACTATGTTTTAAATGTTTTAACAACAAAAAGTGATGTTTATGGTTTAGGTGTTGTGATGTTGGAGCTTTTGACAGGTAAAAGAGCAGTGTTTAAAACTGAAGGTGGTTCAAGTCCTATTGGTGTGGTGGAATATGCAGGGCCAAAGATAGGTTCAGGAGAGGTGTGGAATTTATTGGATCATAGAGTTGGAATACCAGAAGTGAATGAAGTTGAATCTGTTGAGATTATGGCTTATACTGCTATGCATTGTGTGAATTTGGAAGGAAAAGAAAGGCCTAATATGGTTGATGTTGTTGCTAATTTGGAGAGGGCTTTGGCTTTTCTTGAGGGTAGTCCTAGTAGTTTTTCTATGTCTTCATTTTCTGCCACACTTACATGA 2412 0.3789 MTPTSLTLIFSFIFTITTVNSLGTATTTAIIHNTSTICGIVAGKPYQYIQCYQNKKLIPPILPNVSFQSISGGRSFFCGLRSNGLSLHCWNTRTRKSFLKPKRVYHSENVQLNDVAVGDDHVCARELHSGVVRCWRGYGETNGFKFPSPDENFRFRSITCGTGFCCGILKENSKVFCWGVNGKKGVEKEIQKQFGNLSMSTLVAGVSHVCGLTLDKVLVCKGEKNNDSGKLNVPLNSGSVFSGLALGKNFTCGIRKKNGFVLCWGGLFDSGGVNNHVMMKSVSFESIVAGLDFVCGLSIKNLSLICWGNTNEDVNVPLGMILPGPCVSDSCSTCGVYPNSDFLCQGFGSICYDCRTELPFAVPLLPPSTSPPKNQSSKGVEEKTNLRGWKLMVFMIIGSVGAFSGLCTFLYFLMIGARKLLKAKIDNSVQPTSSESDDAYVDIAPMPNIGTTALRSFSSKRHSSSRLRSGSSSKQLDRTENFTFWELVAASDNFSLGNKIGAGSFGCVYKGKLLDGREVAIKRGDTSLKKKKFQEKETAFDSELTLLSRLHHKHLVRLIGFCEENDERLLVYEYMSNGSLHDHLHDKNNVEKNSSILNSWKMRIKVALDAARGIEYIHNYAVPPIIHRDIKSSNILLDSKWNARVSDFGLSLIWQETEQDSMSNIKAVGTVGYIDPEYYVLNVLTTKSDVYGLGVVMLELLTGKRAVFKTEGGSSPIGVVEYAGPKIGSGEVWNLLDHRVGIPEVNEVESVEIMAYTAMHCVNLEGKERPNMVDVVANLERALAFLEGSPSSFSMSSFSATLT* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1675 803 CDD STKc_IRAK 500 781 - -
Mtr3g1675 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Mtr3g1675 803 SUPERFAMILY Protein kinase-like (PK-like) 470 779 IPR011009 -
Mtr3g1675 803 Pfam Protein kinase domain 496 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1675 803 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Mtr3g1675 803 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 5 798 - -
Mtr3g1675 803 Gene3D Transferase(Phosphotransferase) domain 1 575 788 - -
Mtr3g1675 803 Gene3D - 51 317 IPR009091 -
Mtr3g1675 803 ProSiteProfiles Protein kinase domain profile. 494 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1675 803 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 5 798 IPR044815 GO:0004674
Mtr3g1675 803 Gene3D Phosphorylase Kinase; domain 1 466 574 - -
Mtr3g1675 803 SMART serkin_6 494 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1675 803 SUPERFAMILY RCC1/BLIP-II 58 309 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1675 Mtr-Chr3 28926047 28928655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1675 5 794 Receptor kinase-like Gene Family AT3G55950 50.309 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mtr3g1675 Pkinase 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1675 - - gmx:100802403 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1675 3 28926047 28928655 Mtr3g1675 3 28926047 28928655 ECH