Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1673 ATGGTTTTGGCTTGTATCCAGATATTTTGTGCATCCCTAAATCATAGAGTAGTCTTATTTCCATGTGCTCATATTCAATCTCTTTGGTCATTTTGTAGCTGCAGTGCAAGGAAAGTACAGAGACGTCAGCGAAATTTAGTTGCAGCTATGTGGGGTGGTTCTTGTCCTATTTCCATGTCTCCTCCAACTGAAAAGTACGACGTGTTTCTCAGTTTCAGAGGAGAGGATACTCGTGACAACTTCATTAGTCATCTTTCTGCAGAATTATGCAGGAAAAATATCAAAACCTTCATAGATTACAGGTTAGACAGAGGGAAAGAGATTTCACCGGCACTGTACAGAGAAATAGAACAATCAATGATTTACGTCATCATTTTATCCGAGCATTATGCTTCTTCCACATGGTGTATGGATGAACTCACAAAGATACTCGAGTGCAAACAAATATATGGAAGGGATGTGATACCGGTCTTCTACAAGGTGGATCCATCAAATGTTAGGAATCAAAGAGAGAGTTTTGAGGAAGCTTTTATTGAGCATCAACAGCGATTTAGGGACAAAGTGGATACATGGAAGGATGCTCTAACTCAAGTAGCTGGACTGTCAGGATGGGATTCACAAGTAACCGGTCCAGAACATACACTTGTTACCGACATTGTGGAAGAAATTTTGAAGAAAAAAAAGAATCGTCATCGTTTCCTAAGCAACTGTGAAGGAACAATCGGAATGGACAAACATATTGAACAAATCAAATCTTTGTTGCACCTTGAATCACCAGCTGTTCGGATCATAGGAATTTGGGGTATGGGAGGAATAGGCAAAACCGAAATTGCCCGTGCAATATATCACAGGTTTGCAACTCAATTCAATTCTAGCAGCATGATACTAAATGTTGAACAAGAAATAAAAAGAGTTGGACTATCCAATATACATAACAAGTATATATCAGAACTTCTAGAGGAAGACAAACTTTCTTCTAAATTACAGTGCTCATATGTTCAGAGGCTTCGACAAACAAAGGTTCTCCTTGTTCTTGATGATGTGAACACTTCAAATTTAACTATAAAGCATTCTAACTTTGGCCAGGGTAGTAGAATCATTATGACTAGTAGAGACAAACATGTGCTTAAGAATGCCATTTCAGATGAAATATACGAAGTCAAGGAGATGTGTTTTCAAGATTCAGTACAACTCTTCAGTTTAAATGCCTTTAAACAAAACTATCCTATAAAAGCTTATGTAGACTTATCAGAAAAGCTTGTATTAAACCATGCTAAAAGGGTTCCACTAGTTCTCAAGAATTTGGGGTTATTGCTTCATGGTAGAACAAGGGATGCATGGGAAAGTGAATTGCAAAAGTTGCAAGAGTTTCCTGATGAGGATACTTTTAAAGTGTTGAAATTAAGTTATGACTCGCTTGATGACCGACAGAAGAATATGTTTCTTGACATCGCTTGCTTCTATACTGGACATTTGGTGAATGATGTTGCACGAACACTAGATAGTTGTGGTTTCTCTGCTGACATTGGAATGGATGTTCTTAAAGATAAAGGTCTTATATTTATTTCGGAAGGTAGAATTGGGATGCATTATTTAATACAGAAAATGGGACATGAAATTGTTCGTTGGGAGTGTGTTGATGATCCTAGAAACCGTACTCGATTGTGGAATCCTGAGGAAATTTATCATGTTTTAAAAAACAAGGGAACAAATGCAATCCGGTGTATATTCCTGGACGTATGCAAAATAAATAAGGTTCAAGTACATGGTAAAACGTTCAAAAAGATGAGTAATCTTCGAATAATTCAGTTTTATAAGCCTTCTGGCTTTTGGAATGACGACTCTAATGTGATCCTGCCCGAATCTCTTAAAAGCCTTCCTCATACATTAGTATTTCTCCGTTGGGATAACTTCTCTCTAAAATCTTTGCCGTTGAAGTTTTGCCCTAAAAACCTAGTTAAACTTGATATGCGTGGAAGCAATCTTGAGCAACTTTGGGAAGGAGATCAGGATCAGGTTTTGCCAAAATTGAAAAGGCTTGATCTAAGTTATTCTCGTAAGCTTACTCGAGTTCCTGATTTATCACTATGTCCAAATATTGAACAAATCATTCTCAGTGGGTGTGTAAGATTGGTTGACATTTACTCCTCGAGTTTCCTCAACAAGCTCAACTTTTTATGTTTACATGATTGTGTTGAGCTTAGGAGTTTGAATCTTCGAAGGGATGGTCTATCAAGATCTTCTGGATTAGTTGTTCTGTATGGCTGTGTCAGGCTTGAACTGGTGGTTCTTGTTGAAAGTTTATATTTTCTATTCTAA 2319 0.3739 MVLACIQIFCASLNHRVVLFPCAHIQSLWSFCSCSARKVQRRQRNLVAAMWGGSCPISMSPPTEKYDVFLSFRGEDTRDNFISHLSAELCRKNIKTFIDYRLDRGKEISPALYREIEQSMIYVIILSEHYASSTWCMDELTKILECKQIYGRDVIPVFYKVDPSNVRNQRESFEEAFIEHQQRFRDKVDTWKDALTQVAGLSGWDSQVTGPEHTLVTDIVEEILKKKKNRHRFLSNCEGTIGMDKHIEQIKSLLHLESPAVRIIGIWGMGGIGKTEIARAIYHRFATQFNSSSMILNVEQEIKRVGLSNIHNKYISELLEEDKLSSKLQCSYVQRLRQTKVLLVLDDVNTSNLTIKHSNFGQGSRIIMTSRDKHVLKNAISDEIYEVKEMCFQDSVQLFSLNAFKQNYPIKAYVDLSEKLVLNHAKRVPLVLKNLGLLLHGRTRDAWESELQKLQEFPDEDTFKVLKLSYDSLDDRQKNMFLDIACFYTGHLVNDVARTLDSCGFSADIGMDVLKDKGLIFISEGRIGMHYLIQKMGHEIVRWECVDDPRNRTRLWNPEEIYHVLKNKGTNAIRCIFLDVCKINKVQVHGKTFKKMSNLRIIQFYKPSGFWNDDSNVILPESLKSLPHTLVFLRWDNFSLKSLPLKFCPKNLVKLDMRGSNLEQLWEGDQDQVLPKLKRLDLSYSRKLTRVPDLSLCPNIEQIILSGCVRLVDIYSSSFLNKLNFLCLHDCVELRSLNLRRDGLSRSSGLVVLYGCVRLELVVLVESLYFLF* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1673 772 Pfam Leucine Rich Repeat 651 670 IPR011713 -
Mtr3g1673 772 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 58 746 IPR044974 GO:0006952
Mtr3g1673 772 Gene3D Ribonuclease Inhibitor 551 768 IPR032675 -
Mtr3g1673 772 ProSiteProfiles TIR domain profile. 64 227 IPR000157 GO:0007165
Mtr3g1673 772 SMART AAA_5 260 389 IPR003593 -
Mtr3g1673 772 Gene3D - 63 225 IPR035897 -
Mtr3g1673 772 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 226 484 IPR027417 -
Mtr3g1673 772 Gene3D - 226 384 IPR027417 -
Mtr3g1673 772 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 58 746 - -
Mtr3g1673 772 SUPERFAMILY L domain-like 570 753 - -
Mtr3g1673 772 Gene3D - 392 474 IPR042197 -
Mtr3g1673 772 SUPERFAMILY "Winged helix" DNA-binding domain 463 566 IPR036390 -
Mtr3g1673 772 Pfam TIR domain 65 230 IPR000157 GO:0007165
Mtr3g1673 772 PRINTS Disease resistance protein signature 263 278 - -
Mtr3g1673 772 PRINTS Disease resistance protein signature 335 349 - -
Mtr3g1673 772 PRINTS Disease resistance protein signature 425 439 - -
Mtr3g1673 772 PRINTS Disease resistance protein signature 672 688 - -
Mtr3g1673 772 Pfam NB-ARC domain 244 462 IPR002182 GO:0043531
Mtr3g1673 772 SUPERFAMILY Toll/Interleukin receptor TIR domain 59 204 IPR035897 -
Mtr3g1673 772 SMART till_3 65 201 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1673 Mtr-Chr3 28903678 28910797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1673 63 770 WRKY Transcription Factor Family AT4G12020 32.740 1.69e-90 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1673 - - mtr:MTR_3g464030 1443.71