Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1672 ATGTCTGCCAAAGCAATTTTAATTTATCACCTAAGAGAGAAGATGATGCCAATACTGATCCAAATTCTGAGATGGCTGATGCAGGAAAAAGTATGGAGATTTGTTGGTTTTGCTTCAGCTATTGTTGGACTAGTCTGTTATGCTCTCAGCTCTTCATTTAATTATCTGTTTGGTGAGTGGAACTTGTCAAAGATAATTCTTTACAGTGTTATAAGTTTCATAATCTGTCTTATGATTTTGTATCCAAAGGTATGGCAATCATCCAGAGGTCTGAAGTTCAAAGCTCATACCGCCTTTTTTGTTTTGACCCTCACCTCAGTTTATTCTTTTATATATGATAAAGTGGTGAATGAGAAACCAGATGCTTATAGCCTCATTTCATGTGCTGCCTTTGCTATCATGTCACTCAGTTTGTCGAGACAAACTGAGAGACAAACTCAGTGTGGATTTGAAGTTGATCTTCTTTATTTTTTTCTTGGATGTCTAATTGTGCAACTCATGAAGGTAAAATTGCAGTTAGCTGTTGTTGGAGTTGGTTTCAGCTATTTCGTTATCATTTTTCGCTCTGCCTTTTCTTCTTCAGCAGCAAGAAACGGTTATGCTGGGCTCCCGAGTGAAAATTCAGTAGTCGTTGAAGTGGACTCACTACTTACGAGGACACTTCAGCTGGAAAATCCGAATCTAATGGACATGATTTTAGAGCTGGTGAAAAAATATCGTGAAGAAAAAACACGACGAATTTTTATTCAATGGAAACTATTGGAGCCCAATCATGCTATCATGACGGATCCGATTCCATCGGGAAAGATCAACGACATTCGTGAAATTGCAAAGTTGATGGTTGGTGCAAGAGTTGAAGAGGAGTTCACCAACAAGTACATCAGTAACCGCAGGGGATTTTTGCAAGAACTCCTAATTAATAAATTGTTGGGTTTGCAAGATATCAACATCGATGACGACAATGTGAAATATGCAGAGACGATGGCTAAGAATTGGAGCATTGCTTTTGATGCCGCTCTCTGTATATTATTTCCAATTGAACAAAGACTTTGTGACCTTGTCTTTTCCGGTATCTCTTCTACCGCTGCTCGTTGTTTCACGGATATTTGCGAAGAAGCCATATGTCAGATGCTGAATTTTGCCCTTGCAGTTACCGATGGAAGGCCCTCAGCATGGCGTTTGCTCAATATAATTGAAATATATCGGTCATTGTCTCATTTTGGACCGAAATATCAATCATGGTTTCCTGATTCGTTGGTGACAAAAGTGATAGCCACCCTTAAGAGGTTAGGAGAAACAAGCAGAGACCTTTTCATGGAATTGGATAATCTAACTTTTTATGTCCCAATAGCGAAGCAAGTTTCTCCGGCATATGGCCTCTATCATCCAATCACAGACCATGTCACAGACTACCTCGATTCTATTCATTGCTCACAGAAGATGCTGGAGGAAATTTTATCAAAATACCCCAAGGTTGTTGCTTCTGAAGTGACAACTTCTTGTTCATTTACAGCGCAGATTAAAAGGATGATAGCACTGTTAGAGACAGAATTGATAGCTAAGTCTAAAAACTACAAGTACCCTGCTATGCAGCATCTTTTCATGATGAATAATAGGAAACGCATAGAACAAATGTTAAATAAGATACACTGGAATTCTAGCTTCTATATCGGTGATGATTGGTTTCCAGAAAACCAAGCAAAAATCCAACAACACATTGAGCTTTATCATAGAAACTCGTGGAGTAAGGTGATCAGGTTTCTCAAGGTTGACAGCAATGAGTTGGGTGTTACACAAGAGTCATTGATAGACAAGCTCAATTTGTTCAACATACACTTCGAGGAGATTTGTAGTGAACAATCCATGTGGCTTGTTTATGATAAAGAGCTTAGAAAAGAAGTAATAGAGTCTGTGGAAAACACTTTGCTACCAGCATACGGAATCTTCATGGGAAAGTTTCAGGATTTTCTTGGCAACCACGCCTACAAATATATTGAATATGGACTATTTGAGATTCAAGATCGACTCAGCCATTTGTTTCTGGTAAACAGTAAAGATGATTCATTTGTTTCGGGTGGATTATTATAA 2088 0.3851 MSAKAILIYHLREKMMPILIQILRWLMQEKVWRFVGFASAIVGLVCYALSSSFNYLFGEWNLSKIILYSVISFIICLMILYPKVWQSSRGLKFKAHTAFFVLTLTSVYSFIYDKVVNEKPDAYSLISCAAFAIMSLSLSRQTERQTQCGFEVDLLYFFLGCLIVQLMKVKLQLAVVGVGFSYFVIIFRSAFSSSAARNGYAGLPSENSVVVEVDSLLTRTLQLENPNLMDMILELVKKYREEKTRRIFIQWKLLEPNHAIMTDPIPSGKINDIREIAKLMVGARVEEEFTNKYISNRRGFLQELLINKLLGLQDINIDDDNVKYAETMAKNWSIAFDAALCILFPIEQRLCDLVFSGISSTAARCFTDICEEAICQMLNFALAVTDGRPSAWRLLNIIEIYRSLSHFGPKYQSWFPDSLVTKVIATLKRLGETSRDLFMELDNLTFYVPIAKQVSPAYGLYHPITDHVTDYLDSIHCSQKMLEEILSKYPKVVASEVTTSCSFTAQIKRMIALLETELIAKSKNYKYPAMQHLFMMNNRKRIEQMLNKIHWNSSFYIGDDWFPENQAKIQQHIELYHRNSWSKVIRFLKVDSNELGVTQESLIDKLNLFNIHFEEICSEQSMWLVYDKELRKEVIESVENTLLPAYGIFMGKFQDFLGNHAYKYIEYGLFEIQDRLSHLFLVNSKDDSFVSGGLL* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1672 695 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 682 IPR004140 GO:0000145|GO:0006887
Mtr3g1672 695 Gene3D Exocyst complex component Exo70 208 688 - -
Mtr3g1672 695 Pfam Exo70 exocyst complex subunit 330 677 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr3g1672 695 SUPERFAMILY Cullin repeat-like 258 680 IPR016159 -
Mtr3g1672 695 PANTHER PROTEIN, PUTATIVE-RELATED 23 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1672 Mtr-Chr3 28894572 28896800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1672 249 680 EXO70 exocyst subunit family AT5G58430 36.629 1.33e-79 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1672 - - mtr:MTR_5g074130 656.751