Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1662 ATGGAGGTTACATGGGAACAAAGTGTCACCTATTCTATCAACACAATATACCTTCTCTTCTCTACCTACTTAGTCTTTGTAATGCAACTAGGCTTTGCCATGATATGTGCAGGATCTGTCCGTGCCAAAAATGCCATGAACATAATGCTCACCAATGTAGTTGATGCAGTGGTAGGTAGCATTTCCTTCTACCTTTTTGGTTTTGCATTTGCATATGGCAATTCCAACCCTTTCATTGGTACAAATTTGTTTGCTTTAGCTAACATTCCAAATGAAAATTATGACTATGGATTCTTCCTTTACCAATGGGCATTTGCTATAGCTGTAGCTGGCATCACTAGTGGGTCTATAGCTGAGAGGACACAATTTAGTGCTTATCTTGTTTTTTCATTTTTCCTCACTGGCTTTGTGTACCCAATTGTGGCTCATTGGGTTTGGTCATCTAGTGGTTGGCTTAGTCCCAATTCAAGTGACTTGTTTTTGGGCTCAGGTGCCATTGACTTTGCTGGAAGTGGAGTGGTGCATTTGGTTGGAGCAATCGCTGGACTCTGGGGATCGGTCATAGAAGGCCCGCGAGTCGGACGCTTTGATGCTTATGGAAAGCCCATACCTTTTCGCGGCCACAATGCAACACTTGTGGTGCTTGGGACGTTCTTGTTATGGTTCGGTTGGTTTGGTTTTAACCCCGGTTCATTTGATCGGATTCTCGTGGCCTACCCTGGCACATCTAACGAAGGTCATTGGACTTCAGTGGGCCGAACTGCTGTGACAACCACGCTGGCAGGCTCGACAGCTGGAATCGTCACCTTGTTCGGCCGTCGATTATTGATAGGCCATTGGAATGCAACAGATGTGTGCAATGGTTTGCTCGGTGGGTTTGTCGCCATCACCTCTGGGTGCTCAGTTGTTGAGCCATGGGCTGCAATTCTATGCGGATTCGTCGCAGCTTGGGTGTTAATTGGTCTCAACATCTTAGCACTAAAATTGAACTATGATGATCCATTAGAGGCAGCACAATTGCATGGTGGGTGTGGTCTTTGGGGCTTGTTGTTTACAGGATTGTTTGCTAAAGAACAGTTTGTGATTCAAACCTATAATGCAGGGGTGGCAGTGAAAAGACCCTATGGTCTTCTACTTGGAGGTGGATGGGGATTGATTGGAGCTCAAGTAATTGAGATTTTGGTCATCTTTGTATTTGTTAGTATAACAATGGGCCCTATGTTCTATGGCTTGCACAAGCTGAGGTTATTAAGAATTCCTGTGGATGATGAACTTGCTGGCCTTGATATATCATGCCATGGAGGGTATGCTTATGCTCCTCAAGAGGAAAATCATCCTAGATCTTATGGAGATTATCTGCGTATGCAGGATGATCACTCATAG 1383 0.4476 MEVTWEQSVTYSINTIYLLFSTYLVFVMQLGFAMICAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAYGNSNPFIGTNLFALANIPNENYDYGFFLYQWAFAIAVAGITSGSIAERTQFSAYLVFSFFLTGFVYPIVAHWVWSSSGWLSPNSSDLFLGSGAIDFAGSGVVHLVGAIAGLWGSVIEGPRVGRFDAYGKPIPFRGHNATLVVLGTFLLWFGWFGFNPGSFDRILVAYPGTSNEGHWTSVGRTAVTTTLAGSTAGIVTLFGRRLLIGHWNATDVCNGLLGGFVAITSGCSVVEPWAAILCGFVAAWVLIGLNILALKLNYDDPLEAAQLHGGCGLWGLLFTGLFAKEQFVIQTYNAGVAVKRPYGLLLGGGWGLIGAQVIEILVIFVFVSITMGPMFYGLHKLRLLRIPVDDELAGLDISCHGGYAYAPQEENHPRSYGDYLRMQDDHS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1662 460 SUPERFAMILY Ammonium transporter 11 419 - -
Mtr3g1662 460 TIGRFAM amt: ammonium transporter 14 438 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mtr3g1662 460 Pfam Ammonium Transporter Family 18 438 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mtr3g1662 460 ProSitePatterns Ammonium transporters signature. 167 192 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mtr3g1662 460 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 1 457 - -
Mtr3g1662 460 PANTHER AMMONIUM TRANSPORTER 1 457 - -
Mtr3g1662 460 Gene3D Ammonium transporter AmtB like domains 2 452 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1662 Mtr-Chr3 28736743 28738497 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1662 7 444 Inorganic Solute Cotransporters AT1G64780 66.517 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1662 K03320 - pvy:116129597 778.089