Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1650 ATGCCTTCAATTGCATCTTCCAAACGCAGATTCAGATCTCCCGCCACACCCATCCCGACCACCACCACTTCTCCTCCCACCCGCAAATCCCCCCGCCGTTGCATCTCAGCAACTCCAAATTCAGTCTCATCCGTTGTTGTTCGTCAAATCATCACCGATGAAAATCAAATCGAATCGATCCAACCTGCATCACTTAAATCCAAATGGAATCCCAAAGATGGTGAGCAAATGAGGATTGTGAAGGAGGTGTTGCATTTGTCTACAGCACCGTCTACGATGGTGTGTCGTGAGGAAGAGCAAAATGTGGTGTTGGGGTTTTGTAAAGGGTGTGTTGAGCATGAAAAAGCTGGGAGTCTTTATATATGTGGCTGTCCTGGTACTGGGAAATCGTTGTCGATGGAGAAAGTGAAAGTGAATTTACTCAATTGGGCTGCAGAGGGAGGTTTTCCGCTGCCCGATGTTTTATCTGTAAATTGTACATCGCTGTCAAATACATCTGATATTTTCACAAAGATACTTGGGTTACACAAAACCCTGGGAAAAAAGGGTTCAGGAACACCCTTACAGCAACTTCAGAACTTGTATTCTCATAAATCGCCTACATTGAACATGATATTGATAGTAGCAGATGAATTAGATTATCTAATTACCAAAGACAGAGCTGTGCTCCATGATCTTTTCATGCTTACCACTTTTCCATTTTCCAGATGTATACTTATAGGTGTAGCAAATGCAATTGATCTAGCCGATCGATTTCTTCCAAGGCTTACTGCATTAAATTGCAAGCCTACTGTTGTAACTTTTCGGGCATACACTAAAGATCAGATCCTTAAGATTATTCAAGAAAGGCTAAATGAACTTCCTTACATCGTCTTCCAACATCAAGCATTGGAACTATGTGCCAGGAAAGTTGCTGCAGCTTCTGGAGATATGCGAAATGCTCTTTGTATATGCAGGAGTGCAATAGAGATGCTAGAAGCAGAAATTAGAGATTCTGCTTGCAATTTGAATGCTTTGGAAGAGAAATCATCCTCAGAACAAAATCTTCCTACAGCACCGGATTATGTTAAAAAACAAGAACTTGATATGGTAAGGATTGATCATATGGCTCTTGCATTGTCCAAAACATATAGATCACCAGTTGTGGATACCATACAATCTCTGCCACATCATCAACAAATTATACTCTGCTCCTCGATGAAACGTTTCCGTGGAGCCAAGAAAGACTCAATCCTTGGCGAGTTATATAAATCTTATGCGGAGATATGCAAATCATCACTAATTCCCCCTGCTGGAATCATGGAATTTTCAAACATGTGCAGAGTGTTAAATGACCAGGGCCTTATTAAACTAGGACAATCCAGAGATGATAAATTGAGAAGAGTGACACCAAAACTAGATGAAGGTGATATTACTTTTGCGTTGCAGGGAATCCGCTTTTTTCGAAATTGTCTTCAGTGA 1461 0.4107 MPSIASSKRRFRSPATPIPTTTTSPPTRKSPRRCISATPNSVSSVVVRQIITDENQIESIQPASLKSKWNPKDGEQMRIVKEVLHLSTAPSTMVCREEEQNVVLGFCKGCVEHEKAGSLYICGCPGTGKSLSMEKVKVNLLNWAAEGGFPLPDVLSVNCTSLSNTSDIFTKILGLHKTLGKKGSGTPLQQLQNLYSHKSPTLNMILIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTALNCKPTVVTFRAYTKDQILKIIQERLNELPYIVFQHQALELCARKVAAASGDMRNALCICRSAIEMLEAEIRDSACNLNALEEKSSSEQNLPTAPDYVKKQELDMVRIDHMALALSKTYRSPVVDTIQSLPHHQQIILCSSMKRFRGAKKDSILGELYKSYAEICKSSLIPPAGIMEFSNMCRVLNDQGLIKLGQSRDDKLRRVTPKLDEGDITFALQGIRFFRNCLQ* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1650 486 Gene3D - 264 336 - -
Mtr3g1650 486 MobiDBLite consensus disorder prediction 1 35 - -
Mtr3g1650 486 Pfam CDC6, C terminal winged helix domain 396 474 IPR015163 -
Mtr3g1650 486 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 22 485 - -
Mtr3g1650 486 CDD AAA 111 260 - -
Mtr3g1650 486 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 22 485 - -
Mtr3g1650 486 Gene3D - 381 469 IPR036388 -
Mtr3g1650 486 CDD Cdc6_C 389 471 IPR015163 -
Mtr3g1650 486 Coils Coil 322 342 - -
Mtr3g1650 486 Pfam AAA lid domain 293 327 IPR041083 -
Mtr3g1650 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 331 IPR027417 -
Mtr3g1650 486 PIRSF Cdc6 4 486 IPR016314 GO:0006270|GO:0051301
Mtr3g1650 486 Pfam AAA domain 114 231 IPR003593 -
Mtr3g1650 486 SUPERFAMILY "Winged helix" DNA-binding domain 381 484 IPR036390 -
Mtr3g1650 486 MobiDBLite consensus disorder prediction 9 35 - -
Mtr3g1650 486 Gene3D - 73 263 IPR027417 -
Mtr3g1650 486 SMART Cdc6_C_2 396 475 IPR015163 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1650 13 485 Core DNA Replication Machinery Family AT2G29680 60.000 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1650 K02213 - gmx:100787371 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1650 3 28622805 28627514 Mtr3g1650 3 28622805 28627514 ECH