Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1641 ATGATGGTGGAAGTTGATACAAATACACTTCCTCTTTTTTTTACCCTTGCAGCTGCATTATTTGCATACTTATTATGGTTCCATTTACTTGCTCGAACCCTAACCGGTCCAAAAGTTTTTCCATTTTTCGGCAGCCTCCCGGTTCTCTTCATGAACCGGAACCGGGTTCACGATTGGATGACCTCAAACCTAAACCGAACCGGCGGTTCAAATACTTACCAAACATGCATCCTTCCTTTCCCATTCTTAGCCCGTAAACAAGGCTTCTACACAGTCACAAGTCACCCAAAAAACATTGAACATATCCTCCGAACCCGGTTCGATAATTACCCAAAAGGACCAACATGGCAAACCGCTTTCCATGATCTTTTAGGACACGGAATCTTCAACAGCGATGGTGACACGTGGCTGGTTCAACGTAAAACCGCTGCACTCGAATTCACAACTCGAACCCTTCGTCAAGCCATGGCTCGTTGGGTGAACCGAACCATAAAAAACCGGTTATGGTGCATTTTAGACAAAGCGGTAAAAGAAAAAGTTACCGTTGATTTACAAGACCTTCTTTTACGGTTAACTTTTGATAACATTTGTGGACTCACTTTTGGAAAAGATCCGGAGACTCTTTCTCCGGATCTTCCAGATAACCCCTTTTCTCTTTCTTTCGATTACGCCACTGAAGCTACATTGCAAAGACTACTTTACCCCGGATTCTTTTGGAGGATCCAGAAGCTTCTAGATTTTGGTGCTGAGAAAAAATTGAGAGAGAGTTTAAGTATTGTTGAAAATTATATGAATGACGCTGTTTCAGCTCGCGAGAAATCCCCATCCGATGATCTTTTATCGCGCTTTTTGAAGAAGCGCGACGGCAATGGAAAACCGTTTGACGCCGGGAAACTGAGACACATTGCATTGAATTTTGTTCTAGCAGGGAGAGATACTTCATCAGTGGCATTGAGCTGGTTTTTCTGGCTTGTCATGAATCATCCTAGCGTGGAGGAGAAGATTCTAGCAGAGTTAACGGCGGTTTTGGCTGAAACTCGCGGTGGTGATTCTCGCCGGTGGACGGAGGAAGCCGTGGATTTTGAGGAAGCAGAGAAGCTTGTTTATCTAAAAGCTGCATTGGCTGAGACACTAAGACTATATCCTTCGGTGCCGGAGGATTTCAAATATGCGGTCGACGACGATGTTTTACCAGACGGAACGGTGGTTCCGGCGGGTTCAACGGTGACATATTCGATATATTCAGTTGGAAGAATGAAGAGTGTATGGGGTGAAGATTGCATGGAATTTAAACCGGACCGGTGGTTATCGGTTCATGAAGGTCAAACCCGGTTTGAACCACCAAAAGATGGTTATAAGTTTGTGGCTTTTAATGCTGGACCGAGGACTTGTTTAGGGAAGGATTTGGCTTACCTTCAAATGAAATCTGTTGCTGCTGCTGTTTTGATTCGTTACCGGCTTTTACCGGTTCCCGGTCATAAGGTTCAACAAAAAATGTCTCTTACACTCTTTATGAAGTATGGGTTACGTGTGTTCTTGTGTCCACGTCAGCTTCAGCAACCCAACTCTGCATAG 1575 0.4438 MMVEVDTNTLPLFFTLAAALFAYLLWFHLLARTLTGPKVFPFFGSLPVLFMNRNRVHDWMTSNLNRTGGSNTYQTCILPFPFLARKQGFYTVTSHPKNIEHILRTRFDNYPKGPTWQTAFHDLLGHGIFNSDGDTWLVQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKAVKEKVTVDLQDLLLRLTFDNICGLTFGKDPETLSPDLPDNPFSLSFDYATEATLQRLLYPGFFWRIQKLLDFGAEKKLRESLSIVENYMNDAVSAREKSPSDDLLSRFLKKRDGNGKPFDAGKLRHIALNFVLAGRDTSSVALSWFFWLVMNHPSVEEKILAELTAVLAETRGGDSRRWTEEAVDFEEAEKLVYLKAALAETLRLYPSVPEDFKYAVDDDVLPDGTVVPAGSTVTYSIYSVGRMKSVWGEDCMEFKPDRWLSVHEGQTRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLIRYRLLPVPGHKVQQKMSLTLFMKYGLRVFLCPRQLQQPNSA* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1641 524 Pfam Cytochrome P450 90 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1641 524 Gene3D Cytochrome P450 30 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1641 524 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1641 524 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1641 524 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1641 524 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1641 524 PANTHER CYTOCHROME P450 8 518 - -
Mtr3g1641 524 SUPERFAMILY Cytochrome P450 34 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1641 524 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 8 518 - -
Mtr3g1641 524 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1641 524 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1641 524 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1641 524 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1641 524 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1641 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1641 Mtr-Chr3 28442120 28444206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1641 17 516 Cytochrome P450 AT5G58860 75.200 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1641 K15401 - gmx:100787559 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1641 3 28442120 28444206 Mtr3g1641 3 28442120 28444206 ECH