Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1613 ATGAAGAAACCATCAAGCCCAAACTTGCATCAATCTAACCAAAGAAGAAACAAAATTGGTCACAAAAGTGGTAGTGCAAGCAATACCAATGTCACAAATAAGCACAATCATGAGCATAATCATAGTACTATGACATATTTCAAGTCTGTTTTCAAAAGCTTTTTTACATTGATAACAAAAACAACCTCAGAAGCTGTTGCAAATGATTCCTCGAGGAATAAAGTCAGAGGAGTAACATCTTCAACAGATGTATCATCTGATAGTTCTAAGAGTTCATCAAAATGGAAATCTTCTCAATCTTCAACACCAACTAGCACTTCAAGAAGTCAGCTTGGAATGGGAAATTTCTCATTTGAGGAACTTTACAAGGCAACAGGAAAATTCTCTCCAGATAATAAGATTGGTGAAGGTGCTTTTGGAATTGTATATAAGGGAAGGCTTTATGATGGATCTCTTGTGGCTGTAAAGTGTGCCAGGAAGGATGTACAAAAGAAGCATTTGGCTGAGTTCAAGAATGAAATAAACACCTTGTCAAAAATTGAGCATCTGAATCTTGTAAGGTGGTATGGATATTTGGAGCATGGAGATGATAAGATTATTGTTATTGAATATGTAAATAATGGAACTCTCAGGGAACATTTAGATGGTGTGAGGGGAAATGGACTAGAAATCAGTGAGCGTCTAGACATAGCGATTGACGTAGCTCATGCAATTACATACCTTCATATGTACACAGATCATCCGATCATTCACAGAGACATCAAGGCATCAAATATCTTAATAACAGACAGTCTAAGGGCCAAAGTGGCAGACTTTGGTTTTGCAAGGTTGGCTCCAGAAGACCCTAATGCAACTCATATTTCAACTCAAGTTAAAGGAACAGCCGGTTATTTGGATCCTGATTATATGAGAACACGCCAACTCTCGGAAAAGAGTGATGTTTATTCATTTGGTGTGTTACTTGTTGAAATCATGACAGGAAGACATCCAGTTGAACCAAAGAAACCCCTCAATGAGAGAGTTACAATTAAATGGGCAATGCAGTTGTTAAAACAAGGAGAAGCTGTGATTGCAATGGATCCAAGGCTTAGGAGAAGTTCAGCCTCAAACAAAGCTGTACAAAAGGTTCTCAAGCTTGCTTTCCAGTGTCTTGCACCTGTGAGACGATTGCGTCCATCGATGAAGAATTGTCAAGAGGTTCTATGGGAAATACGGAAAGAGTTTAGAGACAGAGTCTCTTCTCGTCCTCCTGCCATTGGTTCTCACCATTCTTCAGACTTTCCTCAGACAGATTCTAGAAAGAATAGACGTAAGACATTTGGTGTTGCAGGCGATAAGAGACCTCAATTTGTCTCGGCATAA 1362 0.3891 MKKPSSPNLHQSNQRRNKIGHKSGSASNTNVTNKHNHEHNHSTMTYFKSVFKSFFTLITKTTSEAVANDSSRNKVRGVTSSTDVSSDSSKSSSKWKSSQSSTPTSTSRSQLGMGNFSFEELYKATGKFSPDNKIGEGAFGIVYKGRLYDGSLVAVKCARKDVQKKHLAEFKNEINTLSKIEHLNLVRWYGYLEHGDDKIIVIEYVNNGTLREHLDGVRGNGLEISERLDIAIDVAHAITYLHMYTDHPIIHRDIKASNILITDSLRAKVADFGFARLAPEDPNATHISTQVKGTAGYLDPDYMRTRQLSEKSDVYSFGVLLVEIMTGRHPVEPKKPLNERVTIKWAMQLLKQGEAVIAMDPRLRRSSASNKAVQKVLKLAFQCLAPVRRLRPSMKNCQEVLWEIRKEFRDRVSSRPPAIGSHHSSDFPQTDSRKNRRKTFGVAGDKRPQFVSA* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1613 453 PANTHER OS02G0821400 PROTEIN 1 443 - -
Mtr3g1613 453 SUPERFAMILY Protein kinase-like (PK-like) 103 404 IPR011009 -
Mtr3g1613 453 MobiDBLite consensus disorder prediction 66 111 - -
Mtr3g1613 453 MobiDBLite consensus disorder prediction 413 453 - -
Mtr3g1613 453 SMART serkin_6 128 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1613 453 Gene3D Phosphorylase Kinase; domain 1 86 204 - -
Mtr3g1613 453 ProSiteProfiles Protein kinase domain profile. 128 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1613 453 MobiDBLite consensus disorder prediction 427 443 - -
Mtr3g1613 453 MobiDBLite consensus disorder prediction 1 33 - -
Mtr3g1613 453 ProSitePatterns Protein kinases ATP-binding region signature. 134 160 IPR017441 GO:0005524
Mtr3g1613 453 PANTHER OS01G0253100 PROTEIN 1 443 IPR045271 GO:0004714|GO:0006468
Mtr3g1613 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Mtr3g1613 453 Gene3D Transferase(Phosphotransferase) domain 1 205 418 - -
Mtr3g1613 453 MobiDBLite consensus disorder prediction 1 39 - -
Mtr3g1613 453 Pfam Protein tyrosine and serine/threonine kinase 131 401 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1613 Mtr-Chr3 28111865 28114552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1613 123 447 Receptor kinase-like Gene Family AT5G59700 40.000 5.35e-65 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Mtr3g1613 PK_Tyr_Ser-Thr 2.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1613 - - gmx:100819818 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1613 3 28111865 28114552 Mtr3g1613 3 28111865 28114552 ECH