Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1567 ATGCCACGAAAATCAAAGAAGAAAAGGGTCTGTAAGAAGAAACTAGGGTTTATTCAGCAACAACAACAACAAGAATGGTGGAAGAAAGAAGAAGATGAACCAAAATGGGTCACACATTATTGCAGTGATCATCAAATACTGTTAGTGGGTGATGGCGATTTCTCATTCTCACTCTCTCTTGCAAAAGCTTTTGGTTCTGCTTCAAATATCGTTGCTTCTTCACTTGACACCTATGATGAGGTGATCAAGAAGTACAAGAATGCCAAATCAAATGTAGAAGAATTGCAGAAGCTGGGAGCATACGTGTTACATGGAGTGGATGCAACAGCAATGAAGTTTCATCCGGATTTAAAAATGCGGAGGTTTGATCGCGTTATATTCAACTTTCCTCATGCAGGTTTCCATAGGAAGGAAGACAACTTGATGATGATCAAGATGCATATGGATCTCGTGTTTGGTTTCTTCAAGAATGCATGTCACATGCTTAGGGCCAACGGTGAGATTCATGTCAATCACAAAACTACACCTCCTTTCATTGACTGGAACATTGAGAAGCTCGCCAAGCAATGCTTTCTGACAATGATTGACTGCATTGATTTCAACAAGGAAGATTATCCAGGTTATAACAACAAACGAGGAGATAGCTATCGATGTGATGACCCTTTTCCTCTCGGTAAGTGCAGCACTTTCAAGTTCATATGCAATCCTAGAAGTATGAAAAACCATTTGAGGGGAAATCATATCGAGATTTCTAGACAACAGACAATTCTTCCATTTCATGAAGAAATTCAGAGCATTGCGCAATTTCCACCTCCAGTTGATCTCAACTATCTTCCTCGAACAAGTTTATTTCCAAAAATGAATCAATTCAATTGTTATCCTCAGACAAATCACTTTCCAAAGTTGAATGAACCAATTAGATCAGAATTTGACTTGAGAAATGGATACAATACGATTTCAAGGGAGATCAACAATGTGACAGAAATACACGGAAGTGTTGCTTGTTCTGCTGACGGTTACCGCTATGCTCGTGATATGACACAAGACACTCGAAGATTGGTACCACCAATGGAGTCATTGCAATCTCTGCAACCTTGGCCAACACCAACTAATTGCCGATATTCTCTAACAGAGCCTCTTAGGAGAACAATGGATATGGCTCCCCCTTTGTCCCTTGGTGCTAGGAATGGAGACTACCAATACAAAGCCTTTGAAGGAAGCTCAAGTTATATGCAAGAAGAACTTTACAGAAATGCCCAGAGGCCAAGCTATTTCCAAGAAGAACCTTACAGAAATGCTCCGTTGCCAAGTCGCTCTTTTGATATAGCTAGGTATGACTTAGAGAGGTACAATGCTGAAGTGCCTAGGAGAGTTTTCAATAGAGAAATTTATGCTATGCAGTGA 1404 0.4017 MPRKSKKKRVCKKKLGFIQQQQQQEWWKKEEDEPKWVTHYCSDHQILLVGDGDFSFSLSLAKAFGSASNIVASSLDTYDEVIKKYKNAKSNVEELQKLGAYVLHGVDATAMKFHPDLKMRRFDRVIFNFPHAGFHRKEDNLMMIKMHMDLVFGFFKNACHMLRANGEIHVNHKTTPPFIDWNIEKLAKQCFLTMIDCIDFNKEDYPGYNNKRGDSYRCDDPFPLGKCSTFKFICNPRSMKNHLRGNHIEISRQQTILPFHEEIQSIAQFPPPVDLNYLPRTSLFPKMNQFNCYPQTNHFPKLNEPIRSEFDLRNGYNTISREINNVTEIHGSVACSADGYRYARDMTQDTRRLVPPMESLQSLQPWPTPTNCRYSLTEPLRRTMDMAPPLSLGARNGDYQYKAFEGSSSYMQEELYRNAQRPSYFQEEPYRNAPLPSRSFDIARYDLERYNAEVPRRVFNREIYAMQ* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1567 467 Coils Coil 75 98 - -
Mtr3g1567 467 PANTHER BNAC06G26310D PROTEIN 30 234 - -
Mtr3g1567 467 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 56 190 IPR029063 -
Mtr3g1567 467 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 47 212 IPR019446 GO:0070042|GO:0070475
Mtr3g1567 467 PANTHER PHENYLALANYL-TRNA SYNTHETASE 30 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1567 Mtr-Chr3 27480860 27483824 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1567 - - mtr:MTR_3g061070 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1567 3 27480860 27483824 Mtr3g1567 3 27480860 27483824 ECH