Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1566 ATGGGTACTGCTAAGTCAGCTGTTGATTTAATGGGATCTTCTTCTGAAGTTCATTTTTCTGGATTTCACATGGATGGTTTTGAGAAAAGAGAGGCTAGCATAGAACAACCAACAACATCAGCAACTGATGTGTACAACCAACCTTTCGTCATAGGTGTTGCTGGTGGTGCAGCATCCGGCAAAAAAACAGTTTGTGATATGATTGTTCAGCAACTTCATGACCAGCGAGTTGTGCTTGTTAATCAGGATTCTTTTTACAATAACTTGACTGAGGAGGAACGAGCAAGAGTACAAGATTACAACTTTGATCATCCTGATGCTTTTGATACCGAGGAATTGCTTCGTGTTATGGACAAGTTGAAGCATGGCGAAGCTGTTGATATTCCAAAGTATGACTTCAAGAGTTACAAAAGTGATGCATTAAGAAGGGTTAACCCTTCAGATGTTATAATTTTGGAAGGCATCCTTGTTTTCCACGATCCTCGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTTTGGCAAGAAGGATCAGGCGTGATACCAGCGAGAAGGATCGGGACATTGGAGCAATTCTTGATCAATATTCAAAATTTGTAAAGCCAGCTTTTGATGACTTCATTCTTCCAACAAAGAAATATGCCGATATCATCATACCTCGTGGAGGAGATAATCATGTGGCTGTTGATTTGATCGTTCAGCACATCCGCACAAAGCTTGGTCAACATGACCTGTGTAAAATATATCCAAATTTATATGTCATTCATTCAACTTTTCAGATACGGGGTATGCATACTCTGATACGTGATGCTCAGATAACGAAGCATGATTTTGTATTTTATTCTGATCGTTTGATACGATTGGTTGTAGAACATGGTTTGGGGCATCTTCCATTTACAGAAAAGCAAGTGATCACTCCCACTGGTTCTGTATACACTGGTGTGGATTTTTGTAAGAGGTTGTGTGGTGTCTCTGTCATCAGAAGTGGGGAGAGTATGGAGAATGCCTTAAGAGCATGCTGTAAAGGTATTAAGATTGGGAAAATTTTGATCCACCGAGAAGGTGACAATGGTCAACAGCTAATATATGAGAAGTTGCCAAACGATATCTCAGAAAGGCACGTGTTACTGTTGGACCCTATCCTTGGCACAGGTAACTCAGCTGTTCAAGCGATTTCTTTACTTATACAAAAGGGTGTACCAGAGTCCAACATCATATTTCTTAATCTCATATCTGCTCCTAAAGGTGTACATGTGGTATGCAAATGTTTTCCAAGAATTAAAATAGTGACATCTGAGATAGAGATTGGTTTGAATGAAGATTTCCGTGTTATACCGGGCATGGGCGAGTTCGGAGATCGGTACTTTGGAACAGATGATGATGAACAAGTAGTGGTTGCTTCACAGTAA 1431 0.4011 MGTAKSAVDLMGSSSEVHFSGFHMDGFEKREASIEQPTTSATDVYNQPFVIGVAGGAASGKKTVCDMIVQQLHDQRVVLVNQDSFYNNLTEEERARVQDYNFDHPDAFDTEELLRVMDKLKHGEAVDIPKYDFKSYKSDALRRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTSEKDRDIGAILDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAVDLIVQHIRTKLGQHDLCKIYPNLYVIHSTFQIRGMHTLIRDAQITKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISERHVLLLDPILGTGNSAVQAISLLIQKGVPESNIIFLNLISAPKGVHVVCKCFPRIKIVTSEIEIGLNEDFRVIPGMGEFGDRYFGTDDDEQVVVASQ* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1566 476 CDD UMPK 50 246 IPR000764 -
Mtr3g1566 476 Gene3D - 44 249 IPR027417 -
Mtr3g1566 476 TIGRFAM udk: uridine kinase 47 246 IPR000764 -
Mtr3g1566 476 SUPERFAMILY PRTase-like 249 466 IPR029057 -
Mtr3g1566 476 Gene3D - 250 465 IPR029057 -
Mtr3g1566 476 PANTHER URIDINE KINASE 16 467 - -
Mtr3g1566 476 PRINTS Uridine kinase signature 48 65 - -
Mtr3g1566 476 PRINTS Uridine kinase signature 78 89 - -
Mtr3g1566 476 PRINTS Uridine kinase signature 123 138 - -
Mtr3g1566 476 PRINTS Uridine kinase signature 178 188 - -
Mtr3g1566 476 PRINTS Uridine kinase signature 192 203 - -
Mtr3g1566 476 PRINTS Uridine kinase signature 214 227 - -
Mtr3g1566 476 Pfam Phosphoribulokinase / Uridine kinase family 50 234 IPR006083 GO:0005524|GO:0016301
Mtr3g1566 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 239 IPR027417 -
Mtr3g1566 476 Pfam Uracil phosphoribosyltransferase 264 465 - -
Mtr3g1566 476 CDD PRTases_typeI 323 438 IPR000836 -
Mtr3g1566 476 PANTHER URIDINE KINASE 16 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1566 Mtr-Chr3 27465633 27472486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1566 4 468 PRT Gene Family AT4G26510 84.368 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1566 K00876 - gmx:100527893 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1566 3 27465633 27472486 Mtr3g1566 3 27465633 27472486 ECH
Mtr3g1566 3 27465633 27472486 Mtr5g3461 5 43463528 43471244 PCT