Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1562 ATGCCACAGGAGGGGTCACTATCACAAAACTCTTTTTTGATATCTCCTTCAAAGAGAGGATTGAAAGGTATAGTTTCTATGAACATCAAGGAAGCTTCATGTCCTGCCATAGAGGAGAGTTTCAACGATCATGATTTGGCTCATAGGAAAGCAGAAGAAGCAGCTTCAAGGAGATACGAAGCATCAGAATGGCTACGTCAAATAGACAACGTTGCATGTTCATTGTTACCACCAAAACCCTCAGAACAACAATTTTGTCTTTCACTCCGCAATGGTCTCATTCTCTGCAACGTCCTCAACAAAGTGAATCCTGGTGCTGTTGTTAAAGTCGTGGACAATCCAGCACTTGCTGCTGCTGCTTCAGTTGAAGGAGCAGCACATTCTGCTATTCAGTATTTTGAGAATATGAGAAACTTTCTTTATGCTGTTAAGGATATGCAACTCTTGACTTTTGAAGCTTCTGATTTAGAGAAGGGAGGATCATCAAATAAAGTTGTGGACTGCATTCTATGTTTAAAAGGATACTATGAATGGAAACTATCTGGTGGAATTGGTGTGTGGAGATATGGTGGAACTGTGAGGATTACTTCCTTGCCAAAGATGTCTCCATCTTCCTCCGTAGTTGGCAGTGAAAGTGCTGATGATTCACTGGACGAGTCTGAGTCATCACAGTATGAACATCTGCTTGAATTTCTTCACCTATCTGAAGAGTTTTTGAATGAAGAAACCAAGACTACCAATGTTCTTGCTTTCCTTTTTGATCACTTTGGACTCAGACTTCTTCAGGCTTATCTTAGAGAGACGGATGGGATTGATGATCTGCCTCTGAATACAATGGTAATTGATGCCTTACTCGGCAAGGTAGTCAAGGATTTCTCTTCTTTGCTTGTTTCTCAAGGCGCTGAGCTTGGACTTTTCCTGAAGAAAATATTAAAAGGGGATATTGGCTGTCTCTCAAGGAGGGAGTTTGTAGAAGCTATCTCACTATATCTTAATCAAAGAAGTAGTTTGGCATCAAATGATTTCTCCAAATTCTGCAGTTGTGGTGGAAAACGTGACAGTGTTCGACAAAATGTCAATTATTCTGCCAAATATGCTGAAGTAATCAATACTCAACAGAAACAACTTGAGACGGTGAAATACTATTTTGAAGATACAAAACTGGAAGTCAAACAAATTCACTCAGAGTGGGAACAAGAATTGATTAGGCTAGAGCATCATGTCAAGAGCCTTGAAGTGGCATCCTCTTCTTACCACAAAGTTTTGGAAGAGAACCGTTCTCTTTACAATCAAGTACAAGACCTCAAAGGAGCTATTAGGGTCTATTGTAGAGTCAGACCCTTCTTACCGGGACAATCAAATGGACAGTCGACAGTTGACTATATTGGAGAAAATGGAGACATGATGATTGTAAATCCAATCAAGCAAGGAAAAGATGCAAGAAGGGTATTTTCATTCAATAAGGTGTTTGGTACAAGTGTAACACAAGAACAAATTTATGCCGACACTCAACCATTGATCAGGTCTGTTTTAGATGGTTATAATGTATGTGTCTTTGCATATGGGCAGACCGGTTCAGGGAAGACCTACACAATGAGTGGCCCTGATCTGTCAGCTGAAGATACATGGGGTGTAAACTATAGAGCTTTGCGTGATTTATTTTATATATCAAAGGAAAGGTCAGATTCCATAATATACGAAGTTTTCGTCCAGATGATTGAGATATACAATGAACAAGTGAGAGATTTATTAGTCAGTGATGGCTCTAACAGAAGATTAGATGTACGAAACACTTCCCAACTAAACGGACTCAACGTGCCAGATGCATATTTAGTTCCCGTTACTTGTACACGAGATGTTTTATATTTAATGAGAATTGGTCAGAAAAACCGCACTGTTGGTGCTACAGCCCTAAATGAGAGAAGCAGCCGTTCTCATAGTGTTTTGACCGTTCATGTTCGAGGCAGGGAGTTAGTTTCTAACTCCATACTTAGGGGTTGTCTCCATCTTGTGGATTTGGCTGGTAGCGAGAGAGTTGACAAATCTGAAGCTGTTGGTGAGAGACTAAAGGAGGCCCAACATATTAATAGATCACTTTCAGCACTTGGAGATGTTATTTCTGCTTTGGCACAAAAAAGTCCACATATCCCTTACAGAAATAGCAAGCTCACACAAGTTTTACAAGATTCTTTAGGAGGGCATGCAAAAACTTTGATGTTTGTTCATATAAACCCCGAACTTAATGCTATCGGGGAGACAATTAGCACACTCAAGTTTGCTGAAAGGGTTGCATCCATTGAACTTGGGGCTGCTCAATCTAATAAAGAAACTGGAGAAATTCGAGAACTGAAGGAAGAGATATCAAGTCTCAAACAGGCGTTGGAGAGAAAAGAAACAGAACTGGAGCAGTTGAAAGCTGGGAATGCTCGAAACATTTCAGAGTCTCCAAAACGAAGAGCTGTTTCACCTTACCATTTGCCCAGATATGGCACCAGTGGCAGCATGAAGCCTGAAACTAGTCAACGAGTCATGGATGATAGAAATCTTGAGGCTAGAAGTTGCTCGTCGGGTAAGCAAAGGAGGTCAAGGTTTCCCTCGGCATTTATGGACAAGGAGTCCATGCCAAAAATGTCCCTTCTCACCGAAGAAAAGTTAGCGGGCTCAGGAAAAGGAAGATCACCGTCGCCTCCAGTTAGAAGATCAACATCTACCGATAGAGGGTCAGTCATAAAAAACAAGGTCAAAAGCGACACAACAGACAACCAACCAGTATTAAAGCATCCATTTCCAGCTAGAGTGCCTGTTAACAAATTTCTTGGCACAATGCCAATGGCTGCAGCCCTTGAAAATAATGCAAGATTGCATTTGAATTCACCTGAGCCAGTAAAATATGAAGAGGAACAATTCAAGCAAGCACTTAGTGCGGTAAGACAAGGCGGTGTTAGAAAAAGCAAGGTTGAAAGCAAGGCAAAGACCAAACATCATCAACTATCTCCCTTTAAGATTCAAAAGTCTGACTTGATCCCAACATTTATTTCTGGCATGGAGACACCTCCAAAGAGTGATCACTCTGATCCCGAAAATGATCTTAGATTTGTTGACTCTTCTGTTCATGGTGCTTTAAATCTCAGTAAGATACGTCAGAACTTTCCAAGGAATTTTCAGAACCTTGAATCAAGAAGAACAATGCAAGGAGGAGAGCCTTTATCAGCTAGCAAAGTTGATAACAAACTTTTGAATGGTTCAGCAAGCAATCATAAAGAAGGAAATAATACATCCATGCCTGAATTTAGAAGAAGCCGATCTACTCCACGCGGAAATTTTTTTGGTTTATCTTGA 3339 0.4061 MPQEGSLSQNSFLISPSKRGLKGIVSMNIKEASCPAIEESFNDHDLAHRKAEEAASRRYEASEWLRQIDNVACSLLPPKPSEQQFCLSLRNGLILCNVLNKVNPGAVVKVVDNPALAAAASVEGAAHSAIQYFENMRNFLYAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGYYEWKLSGGIGVWRYGGTVRITSLPKMSPSSSVVGSESADDSLDESESSQYEHLLEFLHLSEEFLNEETKTTNVLAFLFDHFGLRLLQAYLRETDGIDDLPLNTMVIDALLGKVVKDFSSLLVSQGAELGLFLKKILKGDIGCLSRREFVEAISLYLNQRSSLASNDFSKFCSCGGKRDSVRQNVNYSAKYAEVINTQQKQLETVKYYFEDTKLEVKQIHSEWEQELIRLEHHVKSLEVASSSYHKVLEENRSLYNQVQDLKGAIRVYCRVRPFLPGQSNGQSTVDYIGENGDMMIVNPIKQGKDARRVFSFNKVFGTSVTQEQIYADTQPLIRSVLDGYNVCVFAYGQTGSGKTYTMSGPDLSAEDTWGVNYRALRDLFYISKERSDSIIYEVFVQMIEIYNEQVRDLLVSDGSNRRLDVRNTSQLNGLNVPDAYLVPVTCTRDVLYLMRIGQKNRTVGATALNERSSRSHSVLTVHVRGRELVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAIGETISTLKFAERVASIELGAAQSNKETGEIRELKEEISSLKQALERKETELEQLKAGNARNISESPKRRAVSPYHLPRYGTSGSMKPETSQRVMDDRNLEARSCSSGKQRRSRFPSAFMDKESMPKMSLLTEEKLAGSGKGRSPSPPVRRSTSTDRGSVIKNKVKSDTTDNQPVLKHPFPARVPVNKFLGTMPMAAALENNARLHLNSPEPVKYEEEQFKQALSAVRQGGVRKSKVESKAKTKHHQLSPFKIQKSDLIPTFISGMETPPKSDHSDPENDLRFVDSSVHGALNLSKIRQNFPRNFQNLESRRTMQGGEPLSASKVDNKLLNGSASNHKEGNNTSMPEFRRSRSTPRGNFFGLS* 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1562 1112 SMART ch_5 57 175 IPR001715 GO:0005515
Mtr3g1562 1112 Pfam Kinesin motor domain 444 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr3g1562 1112 MobiDBLite consensus disorder prediction 895 923 - -
Mtr3g1562 1112 SUPERFAMILY Calponin-homology domain, CH-domain 49 206 IPR036872 -
Mtr3g1562 1112 Coils Coil 394 414 - -
Mtr3g1562 1112 Gene3D Kinesin motor domain 381 768 IPR036961 -
Mtr3g1562 1112 Coils Coil 773 814 - -
Mtr3g1562 1112 MobiDBLite consensus disorder prediction 840 857 - -
Mtr3g1562 1112 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 22 1107 - -
Mtr3g1562 1112 SMART kinesin_4 436 774 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr3g1562 1112 MobiDBLite consensus disorder prediction 1062 1112 - -
Mtr3g1562 1112 ProSiteProfiles Calponin homology (CH) domain profile. 55 177 IPR001715 GO:0005515
Mtr3g1562 1112 MobiDBLite consensus disorder prediction 1075 1100 - -
Mtr3g1562 1112 Pfam Calponin homology (CH) domain 77 177 IPR001715 GO:0005515
Mtr3g1562 1112 MobiDBLite consensus disorder prediction 801 928 - -
Mtr3g1562 1112 ProSiteProfiles Kinesin motor domain profile. 438 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr3g1562 1112 PRINTS Kinesin heavy chain signature 513 534 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr3g1562 1112 PRINTS Kinesin heavy chain signature 636 653 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr3g1562 1112 PRINTS Kinesin heavy chain signature 667 685 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr3g1562 1112 PRINTS Kinesin heavy chain signature 716 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr3g1562 1112 Gene3D - 46 177 IPR036872 -
Mtr3g1562 1112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 439 803 IPR027417 -
Mtr3g1562 1112 PANTHER KINESIN-LIKE PROTEIN KLP-3 22 1107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1562 Mtr-Chr3 27399694 27409752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1562 429 766 Calmodulin-binding Proteins AT5G65930 42.151 1.18e-73 265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1562 3 27399694 27409752 Mtr5g3459 5 43424310 43433471 PCT