Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1561 ATGCCTGAAAACTTAAGGAATCTCTCACTTTCTCCCAAAAACTTCTCCTTCACCTTCACCTTACTTCTCTTATTAAACTCTTTTCTTCTCATTCCATTTTGTTACTCTTACTCACTTAATGAGCAAGGACAAGCTCTTTTAACATGGAAAAACAGTTTAAACAATACTTTAGAGTTAGATGCATTATCATCATGGAAGTCTTCATCCACAACACCTTGCAATTGGTTTGGAGTGTTTTGCAATTCACAGGGAGATGTGATAGAGATAAACTTGAAGTCAATGAACTTAGAAGGCTCATTACCTTCAAATTTTCAATCTCTGAAGTCCTTAAAGTCTCTCATCCTCTCATCAACAAACATCACAGGAAAGATACCAAAAGAGATTGGAGACTATCAAGAGCTTATCTTTGTTGATCTAAGTGGAAATTCTCTACTTGGTGAAATACCAGAAGAAATTTGCAAGCTAAACAAACTTGAGAGTTTGTTTCTTCATACAAATTTCTTTGAAGGAAACATTCCATCCAACATTGGAAATCTATCAAGTCTTGTGAACTTTACACTCTATGATAATCATTTGAGTGGTGAAATTCCAAAGAGTATTGGTTTTTTGAACAAGCTTCAAGTGTTTAGAGCTGGTGGAAATAAAAATCTCAAGGGTGAGATCCCTTTGGAGATTGGAAACTGCACAAACTTGATCTTATTAGGCCTTGCAGAAACAAGTATTTCAGGAAGCATTCCTTCTTCAATCCAAATGCTGAAAAGAATCAAAACCATAGCTATTTACACAACTCTATTGTCAGGCTCAATTCCTCAAGAGATTGGAAATTGCAGTGAGTTGCAGCACCTTTATTTGTATCAGAACTCTCTCTCAGGTTCAATTCCAGCTCAAATTGGAAACCTTAACAAGCTGAAGAGTTTACTTCTATGGCAGAACAATTTAGTAGGTACTATTCCAGAAGAGATTGGAAGATGCAGAGAGATTCAACTTATAGATTTTTCAGAAAATCTTTTAACAGGTAGCATACCGAAGATTCTCGGCGAGCTTTCAAATCTTCAAGAGCTTCAATTGAGTGTCAATCATCTCTCAGGTATCATACCTCCTGAGATTTCACATTGCACTTCTTTGACTCAACTTGAAATTGACAACAATGCTCTCACTGGTGAGATTCCTCCTCTTATTGGCAATTTGAGAAACTTGAATTTGTTCTTTGCATGGCAGAACAAGTTAACAGGAAAAATCCCAGATAGTCTTTCAGATTGTCAAGAACTTCAGTCACTTGATCTTTCATACAATAATTTGATTGGTCCAATACCAAAAACACTTTTTAATTTGAGGAATCTCACAAAACTTTTGCTTATTTCCAATGATTTGTCAGGCTTTATACCACCTGATATAGGAAACTGCACAAACCTCTATAGGCTTAGGTTGAATCACAATAGAATATCAGGTAACATTCCAAATGAGATTGGAAACTTGAATAATTTGAATTTTGTTGATATTAGCAACAACCATCTTGTTGGAGAGATTCCTACAACACTTTCTGGATGTCAAAATCTTGAGTTTCTTGACCTTCATTCCAATAGTCTCGCCGGTTCGGTCCCAGATTCTCTTCCTAAAAGCCTTCAATTGGTTGACTTGTCAGACAATAGGCTATCAGGTGAATTGAGTCACACAATAGGTTCATTAGTCGAGCTAAGCAAACTAAACTTAGGAAAGAATCGACTAAGTGGAAGAATTCCATCGGAGATCTTATCTTGCTCTAAACTACAGCTTCTAGACCTTGGAAGCAATAGTTTCACAGGAGAAATTCCAAAGGAATTGAGTCTAATTCCTTCACTAGAAATCTCTCTTAATCTCAGCTTCAACCATTTCTCTGGTGAAATTCCATCACAATTCTCTAGTCTTAGCAAACTAAGTGTGCTTGATCTCTCACATAACAAACTCTCAGGGAATTTAGATCCTCTATCTGACCTTCAAAATCTTGTTTCCTTAAATGTTTCCTTCAATGCCTTCTCTGGTAAGTTACCTAACACACCATTCTTCCATAATCTCCCTCTCAGTGATCTTGCCGAAAATGAAGGTCTTTACATTGCCAGTGGTGTTGTAAATCCTTCTGATAGAATAGAATCCAAAGGTCATGCAAAATCAGTTATGAAATCTGTAATGTCCATTCTTTTAAGCACAAGTGCAGTACTAGTCCTGCTCACAGTCTATGTCTTGATTCGTTCGCATATGGCGAACAAAGTGATCATTGAAAATGAAAGCTGGGAGGTGACTTTGTATCAAAAGTTTGAACTCTCGATTGATGACATAGTCTTGAATCTTACATCATCCAATGTGATTGGCACCGGAAGTTCAGGAGTTGTTTACAAGGTAACAATTCCGAACGGCGAAACACTTGCAGTTAAAAAGATGTGGTCATCAGAAGAGTCAGGAGCATTCAATTCTGAAATCCAAACCTTAGGTTCAATCAGACACAAGAATATCATTAGGCTTCTTGGTTGGGGATCCAACAGGAACCTGAAGCTACTGTTTTATGACTATCTCCCCAATGGAAGCCTCAGTTCATTACTTCATGGTTCAGGAAAAGGAAAAGCAGAATGGGAAACAAGATATGATGTTATATTAGGTGTGGCTCATGCACTTTCATATTTGCATCATGATTGTGTTCCTGCTATCATGCATGGAGATGTCAAAGCCATGAATGTTCTGTTAGGTCCTGGATATCAACCTTACCTAGCTGACTTTGGCTTGGCAAGAACTGCAGCTGAAAATGATGACAATACTAATTCCAAGCCAATCCAAAGACATCATTACCTTGCTGGTTCATATGGATACATGGCTCCTGAACATGCATCAATGCAGCCTATAACTGAGAAGAGTGATGTTTACAGTTATGGTATGGTTCTACTTGAAGTCCTAACAGGAAGGCACCCTTTAGATCCAAGTCTTCCAGGGGGTTCAAACATGGTTCAATGGGTTAGGAATCATTTATCTAGCAAAGGAGACCCTTCTGAAATTCTTGACACAAAACTTAGAGGAAGGGCTGACACTACCATGCATGAAATGCTACAAACTTTAGCAGTGTCATTTCTATGTGTAAGCACTAGAGCTGCTGACCGTCCAGCAATGAAAGATATTGTTGCAATGCTCAAAGAAATTAGACCTGTTGAAACATCAAGAGCTGACTCTGATGTATTGAAATTAGGAGGTTTAACATCACAATCACATAGTTCTCCACCACCTCCTAAGAATGTGCTTTTACATGGATCTTCTACTTGCTCCTATAATTTCTCAGATGGTTAA 3306 0.3778 MPENLRNLSLSPKNFSFTFTLLLLLNSFLLIPFCYSYSLNEQGQALLTWKNSLNNTLELDALSSWKSSSTTPCNWFGVFCNSQGDVIEINLKSMNLEGSLPSNFQSLKSLKSLILSSTNITGKIPKEIGDYQELIFVDLSGNSLLGEIPEEICKLNKLESLFLHTNFFEGNIPSNIGNLSSLVNFTLYDNHLSGEIPKSIGFLNKLQVFRAGGNKNLKGEIPLEIGNCTNLILLGLAETSISGSIPSSIQMLKRIKTIAIYTTLLSGSIPQEIGNCSELQHLYLYQNSLSGSIPAQIGNLNKLKSLLLWQNNLVGTIPEEIGRCREIQLIDFSENLLTGSIPKILGELSNLQELQLSVNHLSGIIPPEISHCTSLTQLEIDNNALTGEIPPLIGNLRNLNLFFAWQNKLTGKIPDSLSDCQELQSLDLSYNNLIGPIPKTLFNLRNLTKLLLISNDLSGFIPPDIGNCTNLYRLRLNHNRISGNIPNEIGNLNNLNFVDISNNHLVGEIPTTLSGCQNLEFLDLHSNSLAGSVPDSLPKSLQLVDLSDNRLSGELSHTIGSLVELSKLNLGKNRLSGRIPSEILSCSKLQLLDLGSNSFTGEIPKELSLIPSLEISLNLSFNHFSGEIPSQFSSLSKLSVLDLSHNKLSGNLDPLSDLQNLVSLNVSFNAFSGKLPNTPFFHNLPLSDLAENEGLYIASGVVNPSDRIESKGHAKSVMKSVMSILLSTSAVLVLLTVYVLIRSHMANKVIIENESWEVTLYQKFELSIDDIVLNLTSSNVIGTGSSGVVYKVTIPNGETLAVKKMWSSEESGAFNSEIQTLGSIRHKNIIRLLGWGSNRNLKLLFYDYLPNGSLSSLLHGSGKGKAEWETRYDVILGVAHALSYLHHDCVPAIMHGDVKAMNVLLGPGYQPYLADFGLARTAAENDDNTNSKPIQRHHYLAGSYGYMAPEHASMQPITEKSDVYSYGMVLLEVLTGRHPLDPSLPGGSNMVQWVRNHLSSKGDPSEILDTKLRGRADTTMHEMLQTLAVSFLCVSTRAADRPAMKDIVAMLKEIRPVETSRADSDVLKLGGLTSQSHSSPPPPKNVLLHGSSTCSYNFSDG* 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1561 1101 SUPERFAMILY Protein kinase-like (PK-like) 773 1051 IPR011009 -
Mtr3g1561 1101 ProSiteProfiles Protein kinase domain profile. 775 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1561 1101 ProSiteProfiles Leucine-rich repeat profile. 637 659 IPR001611 GO:0005515
Mtr3g1561 1101 PRINTS Leucine-rich repeat signature 423 436 - -
Mtr3g1561 1101 PRINTS Leucine-rich repeat signature 635 648 - -
Mtr3g1561 1101 ProSitePatterns Protein kinases ATP-binding region signature. 781 804 IPR017441 GO:0005524
Mtr3g1561 1101 Gene3D Transferase(Phosphotransferase) domain 1 849 1069 - -
Mtr3g1561 1101 Gene3D Ribonuclease Inhibitor 341 436 IPR032675 -
Mtr3g1561 1101 Gene3D Ribonuclease Inhibitor 616 700 IPR032675 -
Mtr3g1561 1101 Gene3D Ribonuclease Inhibitor 234 340 IPR032675 -
Mtr3g1561 1101 Gene3D Ribonuclease Inhibitor 437 537 IPR032675 -
Mtr3g1561 1101 SUPERFAMILY RNI-like 293 665 - -
Mtr3g1561 1101 SMART serkin_6 775 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1561 1101 Pfam Leucine Rich Repeat 423 444 IPR001611 GO:0005515
Mtr3g1561 1101 Pfam Protein kinase domain 778 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1561 1101 Pfam Leucine rich repeat N-terminal domain 40 81 IPR013210 -
Mtr3g1561 1101 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1067 - -
Mtr3g1561 1101 MobiDBLite consensus disorder prediction 1070 1090 - -
Mtr3g1561 1101 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Mtr3g1561 1101 SUPERFAMILY RNI-like 88 399 - -
Mtr3g1561 1101 SMART LRR_typ_2 444 468 IPR003591 -
Mtr3g1561 1101 SMART LRR_typ_2 635 665 IPR003591 -
Mtr3g1561 1101 SMART LRR_typ_2 300 324 IPR003591 -
Mtr3g1561 1101 SMART LRR_typ_2 492 516 IPR003591 -
Mtr3g1561 1101 SMART LRR_typ_2 562 586 IPR003591 -
Mtr3g1561 1101 SMART LRR_typ_2 348 372 IPR003591 -
Mtr3g1561 1101 SMART LRR_typ_2 155 179 IPR003591 -
Mtr3g1561 1101 SMART LRR_typ_2 107 131 IPR003591 -
Mtr3g1561 1101 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1067 - -
Mtr3g1561 1101 Gene3D Phosphorylase Kinase; domain 1 740 848 - -
Mtr3g1561 1101 Gene3D Ribonuclease Inhibitor 538 615 IPR032675 -
Mtr3g1561 1101 Gene3D Ribonuclease Inhibitor 39 202 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1561 Mtr-Chr3 27390878 27395025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1561 37 1100 Receptor kinase-like Gene Family AT5G56040 65.981 0.0 1394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr3g1561 Pkinase 5.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1561 - - gmx:100802880 1761.89