Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1559 ATGAACATGCTTGGTTTACATGATTCTGAAAAACTCATCTCCAAGGAAAAAAAGTTTACTGATTATGATGATGATCTCTATAAGTTCTATCATCTTGAAGAGTCTCAGATTAGGGCCAACTCAAAAGGGTTTAAGGTAGATTTTCAAATGAGAAAGAATGTTGTAGATTGGTTAATACAAACACACTATGAACAAAAACTCATGCCAGAAACCCTCTATCTTTGTGTCAACGTACTCGATCGTGTTCTTTCGAAAATCAAGTTTGAAGTGACGACAGTGGATAAACTTAAACTCATCGGTCTCTCCTCTTTGTTGTTGGCTTCCAAGTATGAACAAAGAAGTGTGGTTGGTGTTTACGATGTTGAATACATGGCTGATTATATTTATATGCCGGAAGAAATATGTCAAATGGAGAAGCTAATCCTACAAAAACTTGGTTGGATTTTAACGGTTCCAACACCTTATGTTTTTCTTGTTAGAAACATAAGGGCGTGTCTTTTATCCGATGAAGACAAGATCATGGAGAATATGGTGTTTTTCTTTTCGGAAGTCAGCTTGACAAATCATTCTATTGTGTGCGACTACAAGCCTTCATTGATTGCTGCTTGTTCCGTGTATTGTGCAAGGTTTGTTGTTGAAAGGTATCCCTTTTGGAGCAATGATTTGAAGATATGCACAGGGTACTCCGAGGAAAACTTGTGGTCTTGTGCTAATGTTATGATGAAATCGTGCATTCAAATTTGTGGAGATGGACACATGGAAGTTTTTAAGAAATTTTCAAGTTTATATCAATCTAGGGTTTCATGTATTGCTCAAGAATTTCTCAAAATTTAA 834 0.3597 MNMLGLHDSEKLISKEKKFTDYDDDLYKFYHLEESQIRANSKGFKVDFQMRKNVVDWLIQTHYEQKLMPETLYLCVNVLDRVLSKIKFEVTTVDKLKLIGLSSLLLASKYEQRSVVGVYDVEYMADYIYMPEEICQMEKLILQKLGWILTVPTPYVFLVRNIRACLLSDEDKIMENMVFFFSEVSLTNHSIVCDYKPSLIAACSVYCARFVVERYPFWSNDLKICTGYSEENLWSCANVMMKSCIQICGDGHMEVFKKFSSLYQSRVSCIAQEFLKI* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1559 277 SMART cyclin_7 56 143 IPR013763 -
Mtr3g1559 277 SMART cyclin_7 156 242 IPR013763 -
Mtr3g1559 277 Pfam Cyclin, C-terminal domain 152 269 IPR004367 -
Mtr3g1559 277 PIRSF Cyclin_A_B_D_E 8 276 IPR039361 -
Mtr3g1559 277 CDD CYCLIN 50 142 IPR013763 -
Mtr3g1559 277 Gene3D - 40 144 - -
Mtr3g1559 277 SMART Cyclin_C_2 152 273 IPR004367 -
Mtr3g1559 277 CDD CYCLIN 150 232 IPR013763 -
Mtr3g1559 277 ProSitePatterns Cyclins signature. 51 82 IPR006671 -
Mtr3g1559 277 SUPERFAMILY Cyclin-like 19 147 IPR036915 -
Mtr3g1559 277 PANTHER CYCLINS 14 273 IPR039361 -
Mtr3g1559 277 Gene3D - 145 276 - -
Mtr3g1559 277 PANTHER CYCLIN-B1-4 14 273 - -
Mtr3g1559 277 Pfam Cyclin, N-terminal domain 26 149 IPR006671 -
Mtr3g1559 277 SUPERFAMILY Cyclin-like 153 272 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1559 Mtr-Chr3 27351849 27352682 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1559 21 270 Core Cell Cycle Gene Families AT2G26760 37.255 2.59e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1559 K21777 - zju:107404651 194.897