Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1557 ATGGATAAACTAAAACTCATGGGTCTCTCCTCATTGTTGTTGGCTTCCAAGTATGAACAAAGAAGTGTGGTTGGTGTTTATGACATCGAAGGCATGGCTGATTACATTTATATGCCAAAAGAAATATGTCAAATGGAGAAGCTAATCCTACAAGAACTTGGTTGGATTTTAACGGTTCCAACACCTTATGTTTTTCTTATTAGAAACATAAGGACATGCCTTTTATCTGATGAAGATAAGATCATGGAGAAGATGGTGTTTTTCTTTTCTGAACTCAGCTTGACAAATCATTCTATTGTGTGCGACTATAAGCCTTCAATGATTGCTGCTTGTTCCGTGTATTGTGCAAGGTTTGTTGTTGAAAGGTATCCCTTTTGGAGCAATGATTTGAAGATGTGTACAGGGTACTCTGAGGACAAGTTATTGTCTTGTGCCAGTGTTATGATGGATTCGTGCATTCAAATTTGTAGAGATGGATACATGGAAGTTTTTAAGAAATTTTCAAGTTTATATCATCAATCTAGGGTTTCATGTATTGCTCAAGAATTTCTCGAAGTTTAA 561 0.3601 MDKLKLMGLSSLLLASKYEQRSVVGVYDIEGMADYIYMPKEICQMEKLILQELGWILTVPTPYVFLIRNIRTCLLSDEDKIMEKMVFFFSELSLTNHSIVCDYKPSMIAACSVYCARFVVERYPFWSNDLKMCTGYSEDKLLSCASVMMDSCIQICRDGYMEVFKKFSSLYHQSRVSCIAQEFLEV* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1557 186 CDD CYCLIN 58 149 IPR013763 -
Mtr3g1557 186 Pfam Cyclin, C-terminal domain 60 172 IPR004367 -
Mtr3g1557 186 SUPERFAMILY Cyclin-like 2 55 IPR036915 -
Mtr3g1557 186 SMART Cyclin_C_2 60 182 IPR004367 -
Mtr3g1557 186 Gene3D - 53 185 - -
Mtr3g1557 186 PANTHER CYCLIN-B1-4 1 180 - -
Mtr3g1557 186 PIRSF Cyclin_A_B_D_E 1 185 IPR039361 -
Mtr3g1557 186 Pfam Cyclin, N-terminal domain 2 57 IPR006671 -
Mtr3g1557 186 Gene3D - 1 52 - -
Mtr3g1557 186 SMART cyclin_7 64 150 IPR013763 -
Mtr3g1557 186 PANTHER CYCLINS 1 180 IPR039361 -
Mtr3g1557 186 SUPERFAMILY Cyclin-like 59 171 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1557 Mtr-Chr3 27344139 27344699 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1557 3 168 Core Cell Cycle Gene Families AT2G26760 40.964 7.56e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1557 K21777 - zju:107410303 139.813