Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1538 ATGCCGGAAACGCTTTATCTCTGTGTCAACATCCTTGACCGCGTACTTTCCAAAATCAATTTTGAAGTCAAGACAATGGAGAAACTTAAACTTATCGGTCTCTCTTCATTGTTGTTGGCTTCCAAGTATGAACAAAGAAGAGCGGTTGGTGTTTACGACGTTGAATACTTGGCTGATTATATTTATATGCCAGAAGAAATATGTCAAATGGAGAAGCTTATCCTGCAAGAACTTGGTTGGATTTTAACAGTTCCAACACCTTATGTTTTTCTTGTTAGAAACATAAGGGCATGTAATTTATCGGATGAAGACAAGATCATGGAGCACATGGTGTTTTTCTTTTCTGAACTCAGCTTAACAAATCATTCTATTGTGTGCGACTACAAGCCTTCTATGATTGCTGCTTGTGCCGTGTATCTTGCAAGGTTTATTGTTGGAAGGTATCCCTTTTGGAGCAATGATTTGAAAATGTGTACGGGGTACTCCGAGGATAAGTTATTGTCTTGTGCCCATGTTATGATGGAATCGTGCATTCAAATTTGTGGAGAGGGAATCATGGAAGTTTTTATGAAATTTTCAAGTTTATATCAATGTAGGGTTTCATGTATTGCTCAAGAATTTCTGGAAGTTTAA 633 0.3744 MPETLYLCVNILDRVLSKINFEVKTMEKLKLIGLSSLLLASKYEQRRAVGVYDVEYLADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVRNIRACNLSDEDKIMEHMVFFFSELSLTNHSIVCDYKPSMIAACAVYLARFIVGRYPFWSNDLKMCTGYSEDKLLSCAHVMMESCIQICGEGIMEVFMKFSSLYQCRVSCIAQEFLEV* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1538 210 Gene3D - 78 209 - -
Mtr3g1538 210 SUPERFAMILY Cyclin-like 86 205 IPR036915 -
Mtr3g1538 210 CDD CYCLIN 83 174 IPR013763 -
Mtr3g1538 210 PIRSF Cyclin_A_B_D_E 1 209 IPR039361 -
Mtr3g1538 210 Pfam Cyclin, C-terminal domain 85 198 IPR004367 -
Mtr3g1538 210 PANTHER CYCLIN-B1-4 1 206 - -
Mtr3g1538 210 SMART Cyclin_C_2 85 206 IPR004367 -
Mtr3g1538 210 CDD CYCLIN 2 75 IPR013763 -
Mtr3g1538 210 PANTHER CYCLINS 1 206 IPR039361 -
Mtr3g1538 210 Gene3D - 1 77 - -
Mtr3g1538 210 SUPERFAMILY Cyclin-like 2 80 IPR036915 -
Mtr3g1538 210 SMART cyclin_7 2 76 IPR013763 -
Mtr3g1538 210 SMART cyclin_7 89 175 IPR013763 -
Mtr3g1538 210 Pfam Cyclin, N-terminal domain 2 82 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1538 Mtr-Chr3 27161707 27162339 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1538 1 193 Core Cell Cycle Gene Families AT2G26760 41.969 4.34e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1538 K21777 - pvy:116130998 165.236