Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1533 ATGCTTTGTTTTCACTCCAAAGTTTCAAGTTTACATGATTCAGAAAAGCTCATCTCCAATGAAAAAAAGAAGTTTAGTGATTATGATGATGATCTATACAAATTTTATCACCTTGAAGAGTCTCAAATCCAGGGAAACTCAAACGGGTTCAAGGTAGATTCTCAAATTAGAAAGAATGTCGTAGATTGGTTGATACAAACACACTACGAACAAAAGCTGATGCCGGAAACGTTTTATCTCTGTGTCAACATCCTTGACCGAGTACTTTCCAAAATCAATTTTGAAGTCAAGACGATGGAGAAACTTAAACTCATCGGTCTCTCTTCGTTGTTGTTGGCTTCCAAATATGAACAAAGAAAAGCTGTTGGTGTTTACCACGTCGAGTACATGGCTGATTATATTTATATGCCAGAAGAAATATGTCAAATGGAGAAGCTTATCCTGCAAGAACTTGGTTGGATTTTAACGGTTCCAACACCTTATGTTTTTCTTGTTAGAAACGTAAAGGCATGTGTTTCTTCTGATGAAGACAAGATCATGGAGAACATGGTGTTTTTCTTTTCGGAACTCAGCTTGACAAATCATTCCATTGTCTGCGACTACAAGCCTTCATTGATTGCTGCTTGTTCCGTGTATTGTGCAAGGTTTGTTGTTGAAAGGTATCCCTTTTGGAGCAATGATTTGAAGATGTGTACAGGGTACTCTGAGGAAAACTTGTTGTCTTGTGCACACGTTATGATGAAATCGTGCATTCAAATTTGTGGAGAGGGAATCATGGAAGTCTTTAAGAAATTTTCAAGTTTATATCAATGTAGGGTTTCATGTGTTGCTCAAGAATTTTTGAAAGTTTAA 852 0.3674 MLCFHSKVSSLHDSEKLISNEKKKFSDYDDDLYKFYHLEESQIQGNSNGFKVDSQIRKNVVDWLIQTHYEQKLMPETFYLCVNILDRVLSKINFEVKTMEKLKLIGLSSLLLASKYEQRKAVGVYHVEYMADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVRNVKACVSSDEDKIMENMVFFFSELSLTNHSIVCDYKPSLIAACSVYCARFVVERYPFWSNDLKMCTGYSEENLLSCAHVMMKSCIQICGEGIMEVFKKFSSLYQCRVSCVAQEFLKV* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1533 283 Pfam Cyclin, C-terminal domain 158 274 IPR004367 -
Mtr3g1533 283 PANTHER CYCLIN-B1-4 18 279 - -
Mtr3g1533 283 Gene3D - 151 282 - -
Mtr3g1533 283 PANTHER CYCLINS 18 279 IPR039361 -
Mtr3g1533 283 ProSitePatterns Cyclins signature. 57 88 IPR006671 -
Mtr3g1533 283 SMART cyclin_7 162 248 IPR013763 -
Mtr3g1533 283 SMART cyclin_7 62 149 IPR013763 -
Mtr3g1533 283 SMART Cyclin_C_2 158 279 IPR004367 -
Mtr3g1533 283 Pfam Cyclin, N-terminal domain 33 155 IPR006671 -
Mtr3g1533 283 SUPERFAMILY Cyclin-like 159 278 IPR036915 -
Mtr3g1533 283 CDD CYCLIN 156 247 IPR013763 -
Mtr3g1533 283 CDD CYCLIN 57 148 IPR013763 -
Mtr3g1533 283 PIRSF Cyclin_A_B_D_E 6 283 IPR039361 -
Mtr3g1533 283 SUPERFAMILY Cyclin-like 22 153 IPR036915 -
Mtr3g1533 283 Gene3D - 46 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1533 Mtr-Chr3 27121158 27122009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1533 13 266 Core Cell Cycle Gene Families AT2G26760 37.354 6.32e-52 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1533 K21777 - zju:107404651 201.06