Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1532 ATGGCAACTTTAGTCCACCCCGTGAACAGAAAAAGGCCAAGGAGAAAGCATTGTTATAAGATGTGGGAAACATTGTTTGATATTCATACAAAGTACCGTCCAATCAAGCCTATTGGCCGAGGAACATATGGCGTGGTGTGCTCATCCATCAATATGGATACCAACGAGAAAGTGGCAATCAAGAAGATTAGCAACGTATTTGATGATTGTGGTGATGCACTCAGAACTTTAAGGGAGATGAAGTTGCTTCGACATGTTCGGCATGAGAATGTGATTTCTCTGAAAGATGTTATGATACCAGACCAAAGAACAAGTTTTAAGGATGTCTACTTGGTCTATGAACTCATGGATAAAGACCTTCATCGTATTATCAAGTCCTCTAAGCCACTTTCCAATAATCATTGCAAACTCTTCTTAGTTCAGTTACTTCAAGGTCTTAATTATCTCCATTCTGCAAATATTCTTCACCGGGACCTGAAGCCTGAGAATCTGCTCGTCAACGCAAATTGTGATTTGAAGATATGTGATTTAGGGCTTGCTCGGGAAAATCAAGTTGATGGTGAGATTATGACAGAGTATGTTGTCACGCGTTGGTATCGAGCTCCGGAGCTTCTATTAGGTTGTGGCAATTACGGAACCTCCATCGATGTGTGGTCCGTAGGATGCCTTTTTGCTGAGATGCTTGGTAGAAAGCCAATTTTCCCCGGAAAGGACTCATTGCACCAAATGAAACTAATTATAAGTGTTCTTGGAAGCCAAAAGTCTGATCTTGATTTAATAGTTAATCCAAAAACCAAGGCATTTATCAAATCACTTCCCTATACACAGGGTACACACTTCTCTCAGCTATACCCACAAGCAGATCCATTAGCCATGGATCTATTACAAAAAATGCTTGTGTTTGATCCAACTAAAAGAATTTCTGCATCAGAAGCACTCCAACATCCATATATGGCTGATCTATGTGATGATCAATGGCGTAACCCTCATCCTCAAGTTCCAGTCAATCTTAACATTGATGAAGATTGGGATAACAAGATAATTAGGGAAATGATGTGGAATGAGATGCTTCATTACCATCATGAAGCTGCTTTTGTCAATGCATAG 1107 0.4011 MATLVHPVNRKRPRRKHCYKMWETLFDIHTKYRPIKPIGRGTYGVVCSSINMDTNEKVAIKKISNVFDDCGDALRTLREMKLLRHVRHENVISLKDVMIPDQRTSFKDVYLVYELMDKDLHRIIKSSKPLSNNHCKLFLVQLLQGLNYLHSANILHRDLKPENLLVNANCDLKICDLGLARENQVDGEIMTEYVVTRWYRAPELLLGCGNYGTSIDVWSVGCLFAEMLGRKPIFPGKDSLHQMKLIISVLGSQKSDLDLIVNPKTKAFIKSLPYTQGTHFSQLYPQADPLAMDLLQKMLVFDPTKRISASEALQHPYMADLCDDQWRNPHPQVPVNLNIDEDWDNKIIREMMWNEMLHYHHEAAFVNA* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1532 368 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mtr3g1532 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 364 - -
Mtr3g1532 368 SMART serkin_6 32 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1532 368 Gene3D Phosphorylase Kinase; domain 1 19 350 - -
Mtr3g1532 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 364 - -
Mtr3g1532 368 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Mtr3g1532 368 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Mtr3g1532 368 SUPERFAMILY Protein kinase-like (PK-like) 24 322 IPR011009 -
Mtr3g1532 368 ProSiteProfiles Protein kinase domain profile. 32 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1532 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Mtr3g1532 368 Pfam Protein kinase domain 32 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1532 Mtr-Chr3 27100453 27101777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1532 1 368 MAP Kinase Gene Family AT2G18170 72.087 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mtr3g1532 Pkinase 1.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1532 K20537 - gmx:100783422 568.155