Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1524 ATGTCTCCAACAACCACCATCATCACGCTCCTCTTCTTCCTTATCCCAACCACACTCTCACAAAACACAACCTTCACCTTCTCTTCTTTCACCCTCCGCAACATCACCCTCCTCGGCGACTCCTTCCTCCGCCACGGTGTCGTCGGTCTCACACGCTCCACCACCGTCCCTGCTTCCAGCTCCGGCACCCTTCTTTACAACAACCCGATTTCTCTTATACCCAATTCATCTTTCTCTTTTAAAACCAGTTTCACTTTCTCTATTACTAACACAAACCCTCCTTCTTCTTCACTCAACCACTTCTCATTCTTCATCAACTCCACCACTAGTTTCATTTCCCTTGATTTTCATACCAACAATAACCATGTTGGTTTTGATTTCAATAATAGTTCAGTCCAAAAAACTGTTGATGATACCGTTGTTTTCAATTTCACCAGTGGAAACTTGATCACTTCTTGGATTGATTATAATGGTTTCAACAAAAACTTGAGTGTTTTCTTAAGCTATGCAAATTCAAGCTTTTCAAGTTCAAAGCCTGAAGAACCTGTTTTGAGTGTTGAATTTGATCTTTCTGAGTATTTCAAGAAGACTGAGATTCTGTATCTGGGGTTTGTTGGTTCTGCTGAAGGAAGTACTGAGCTTCAACAAATCATGAATTGGAGCTTTGAGTCTTTTCAGTTTCTACCTGTTAATCAAACTCAGAATAAAAATTCAAGCTTTCACCATTTTGGTTATCAAGTTGAGGATATTCCAGCTTCAAACTCAACAAAAAATCATCATAGAAAGAGATTTGTGATTGGTTTATGTGTTGCTATTGTGGGTCCATGTTTTTTCTTTGTTCTGCTTTTGGTTTTAGGGTATGTTTCTTTTAGAAAATGGAGTAGTTTAAATAAGCTTAAGAAGAGTAAAAGTTCTATAGGTTGTCCTAAAGAGTTTGGTTATAAGGAATTGAAGTTTGCTACTAAAGGGTTTCATGGTTCAAGAATAATTGGGAATGGTTCATTTGGAACAGTTTATAAGGCTTTGCTTGTTTCTTCTGGTACAGTTGCTGCTGTTAAAAGATCAAGACATTCACATGAAGGAAAAACCGAGTTTTTATCCGAGTTATCGATTATAGCTGGTTTAAGGCACAAGAATTTGGTTCAACTTTTAGGTTGGTGTGTTGAGAAAGGTGAATTGTTACTTGTGTATGAGTTTATGGTTAATGGTAGTTTAGATAAGTTTCTTCATAGAGAATTATCTCATGAGTGTGATATTTTGTTGAGTTGGGTTCAAAGATTTAACATTGTTGTAGGGTTGGCTTCTGTTTTAGCTTATTTGCATCAAGAATGTGAGCAAAGAGTGATTCATAGAGATATTAAGACGGCAAATATATTGCTAGATGGAAATTTGAATCCAAGGTTAGGTGATTTTGGATTGGCAAAACTTATGGATCATGATATGAGTCCGGTTTCGACGTTAACCGCCGGAACAATGGGATACCTAGCTCCTGAGTATCTACAATACGGTAAAGCAACCGACAAAACCGATGTTTTTAGCTTCGGAGTCGTTGTTCTTGAAGTTGCTTGTGGTAGAAGGCCAATTGAGAAAGAAGGTCAAGAAATGGTGAATTTGGTTGATTTTGTTTGGGGACTTTATTCTCAAGGGAAGTTAATTGAGGCTGTTGATAAGAGATTGAATGGTGAATTTGATGAAGTTGAAATGAAGAAGATGTTACTATTAGGGTTAAGTTGTGCAAATCCAAATAGTGATGAAAGGCCTTCTATGAGAAGAGTTTTGCAAATTCTTAACAATGAAGCTTTGCCTCTTGTTGTGCCTAAAGTGAAACCTTGCCTTAGTTTCTCTTCTGGATTGTTATTGAGTCTTGATGAAATTGTTTCTGATTTTGATGAAGGGTTAAGTTCTAATCAATTTAGTTGCAAGATCAAAATTGAACCAAGTTGA 1944 0.3714 MSPTTTIITLLFFLIPTTLSQNTTFTFSSFTLRNITLLGDSFLRHGVVGLTRSTTVPASSSGTLLYNNPISLIPNSSFSFKTSFTFSITNTNPPSSSLNHFSFFINSTTSFISLDFHTNNNHVGFDFNNSSVQKTVDDTVVFNFTSGNLITSWIDYNGFNKNLSVFLSYANSSFSSSKPEEPVLSVEFDLSEYFKKTEILYLGFVGSAEGSTELQQIMNWSFESFQFLPVNQTQNKNSSFHHFGYQVEDIPASNSTKNHHRKRFVIGLCVAIVGPCFFFVLLLVLGYVSFRKWSSLNKLKKSKSSIGCPKEFGYKELKFATKGFHGSRIIGNGSFGTVYKALLVSSGTVAAVKRSRHSHEGKTEFLSELSIIAGLRHKNLVQLLGWCVEKGELLLVYEFMVNGSLDKFLHRELSHECDILLSWVQRFNIVVGLASVLAYLHQECEQRVIHRDIKTANILLDGNLNPRLGDFGLAKLMDHDMSPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSFGVVVLEVACGRRPIEKEGQEMVNLVDFVWGLYSQGKLIEAVDKRLNGEFDEVEMKKMLLLGLSCANPNSDERPSMRRVLQILNNEALPLVVPKVKPCLSFSSGLLLSLDEIVSDFDEGLSSNQFSCKIKIEPS* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1524 647 ProSitePatterns Protein kinases ATP-binding region signature. 330 353 IPR017441 GO:0005524
Mtr3g1524 647 SUPERFAMILY Protein kinase-like (PK-like) 308 619 IPR011009 -
Mtr3g1524 647 ProSiteProfiles Protein kinase domain profile. 324 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1524 647 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 230 IPR013320 -
Mtr3g1524 647 CDD STKc_IRAK 330 598 - -
Mtr3g1524 647 SMART serkin_6 324 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1524 647 Pfam Protein kinase domain 325 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1524 647 Pfam Legume lectin domain 116 234 IPR001220 GO:0030246
Mtr3g1524 647 Pfam Legume lectin domain 23 110 IPR001220 GO:0030246
Mtr3g1524 647 Gene3D - 20 225 - -
Mtr3g1524 647 Gene3D Phosphorylase Kinase; domain 1 288 399 - -
Mtr3g1524 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Mtr3g1524 647 Gene3D Transferase(Phosphotransferase) domain 1 400 601 - -
Mtr3g1524 647 PANTHER - 24 628 - -
Mtr3g1524 647 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.7-RELATED 24 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1524 Mtr-Chr3 26982401 26984605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1524 20 634 Receptor kinase-like Gene Family AT5G55830 54.809 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr3g1524 Pkinase 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1524 - - gmx:100808744 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1524 3 26982401 26984605 Mtr5g3430 5 43154677 43157127 PCT