Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1520 ATGGGAGCCTACATAGAAAATTTTGAAGAGAATGAGCACATTTTTTGTAGCCAATATTCTCCAGTTCCGGTACCTGAAAATGTCACATTGCCGGAATTTGTGCTCCAAAATGCTGAATTATATGGTGATAAGGTTGCATTTGTGGATGCTGAGAGTGGAAAAGGGGTGACTTATAATGAGGTTGTGAGGGATATACATAGATTTTCAAAGGCTTTAAGGTCTCTTGGTTTGAGAAAAGGGAATGTTGTGATTGTTGTACTTCCAAATATTGTAGAGTATGCTATTATTGCTTTGGGAATCATGGATTCTGGTTGTGTGTTCTCAGGAGCTAATCCAGCTTCACATACATCTGAAATTAAGAAACAAGTTGAGTCTGCTGATGCCAAATTAATTGTCACAAATAGCTCAAGCCATGAAAAGGTGAAAAGTCTAGGGCTACCTGTTATTGTCCTAGGAGATGACAATGTGGAAGATGCTATGAACTGGAACAAACTTCTTGAAGCAGGAGATAGGGCAGGGAATGATTTAAAGAAGGAACCAATTCACCAAAATGACCTTTGTGCCATGCCATTTTCATCAGGCACAACAGGAATGTCAAAGGGTGTAATGCTTACACATAGAAACCTAGTAGCAAATCTTTGTTCTACACTTTTTGGTGTAACACCAGAAATGATTGGTCAAGTCACCACATTAGGGTTAATTCCCTTTTTTCACATTTATGGCATCACTGGAATATGTTGTGCTACTATTAGGAATAAAGGGAAAGTAGTGGTGATGGGAAAATATGATTTGAAAACATTTTTGAATGCCTTGATTACACATGAAGTCACATTTGCACCTATTGTTCCACCTATTATTCTTGGATTGGTTAAAAATCCTATTGTTGATCAATTTGATCTTAGTAAGCTTAAACTTCAAGCCATTATGACTGCTGCTGCACCACTTGCACCTGAATTACTTAATTCCTTTGAACATAAGTTCCCTGGTGTTATTGTCCAAGAGGCATATGGACTAACTGAGCATAGCTGCATTACACTTACATATGCACAAAAATTATCTGGAAGTACACATAAAAATTCGGTTGGTTTCATCCTTCCGAATTTGGAAGTCAAGTTTATTGATCCTGAAACAGGAAGATCCCTCCCAAGGAACACACCAGGGGAACTTTGTGTGAGAAGCCAATGTGTAATGCAAGGTTATTATAAACAAGTGGATGAGACTGCTCAGACTATTGACAAAAATGGATGGCTTCACACTGGTGACATAGGATTCATAGATGATGAAGAAAATGTTTTCATTGTTGATCGAATTAAGGAATTGATCAAATACAAAGGCTTCCAAGTTGCTCCTGCAGAGTTAGAGGCTATTTTGCTGTCTCATTCCTCAGTTGAAGATGCAGCTGTTGTACCATTACCAGATGAAGAAGCAGGGGAAATCCCAGCTGCAAGTGTTGTTTTGAGCAAAGGTGCAAAAGAGAGTGAAGAGGATATTATGAACTATGTTGCATCAAATGCTGCTCATTACAAGAAAGTGAGAGTGGTTCACTTTGTGGAAGCTATACCAAAATCACCTTCTGGTAAAATAATGAGAAGGCTTGTCAAAGAGAAGATGGTGGAAAAGATTAAGGAAAATAATTCCCTAACAAAATCTAACAAATTTTAA 1662 0.3791 MGAYIENFEENEHIFCSQYSPVPVPENVTLPEFVLQNAELYGDKVAFVDAESGKGVTYNEVVRDIHRFSKALRSLGLRKGNVVIVVLPNIVEYAIIALGIMDSGCVFSGANPASHTSEIKKQVESADAKLIVTNSSSHEKVKSLGLPVIVLGDDNVEDAMNWNKLLEAGDRAGNDLKKEPIHQNDLCAMPFSSGTTGMSKGVMLTHRNLVANLCSTLFGVTPEMIGQVTTLGLIPFFHIYGITGICCATIRNKGKVVVMGKYDLKTFLNALITHEVTFAPIVPPIILGLVKNPIVDQFDLSKLKLQAIMTAAAPLAPELLNSFEHKFPGVIVQEAYGLTEHSCITLTYAQKLSGSTHKNSVGFILPNLEVKFIDPETGRSLPRNTPGELCVRSQCVMQGYYKQVDETAQTIDKNGWLHTGDIGFIDDEENVFIVDRIKELIKYKGFQVAPAELEAILLSHSSVEDAAVVPLPDEEAGEIPAASVVLSKGAKESEEDIMNYVASNAAHYKKVRVVHFVEAIPKSPSGKIMRRLVKEKMVEKIKENNSLTKSNKF* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1520 553 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
Mtr3g1520 553 Pfam AMP-binding enzyme 36 443 IPR000873 -
Mtr3g1520 553 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 7 540 - -
Mtr3g1520 553 SUPERFAMILY Acetyl-CoA synthetase-like 12 541 - -
Mtr3g1520 553 ProSitePatterns Putative AMP-binding domain signature. 189 200 IPR020845 -
Mtr3g1520 553 CDD 4CL 24 531 - -
Mtr3g1520 553 Gene3D - 12 438 IPR042099 -
Mtr3g1520 553 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 540 - -
Mtr3g1520 553 Gene3D - 439 542 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1520 Mtr-Chr3 26938271 26941739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1520 9 538 Monolignol Biosynthesis Gene Families AT1G62940 72.556 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1520 K01904 - gmx:100811418 956.436