Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1510 ATGAGCAGTGCTTTTTCTTCCATATCTTCTTCTGATGTGGTGCCTCTGAAAAAATATGACGTTTTTCTTAGCTTTCGAGGTGAGGATACTCGCAGAAACTTCACCAGCCATCTTTATGATGCTCTGAGCCGAAAGAAAGTTGAAACCTTTATAGACAACAATAAGCTTCAAAAAGGAGATGAGATCTCGCCAGCACTCATCAAAGCCATTGAGAAGTCACATGCATCTATTGTCATCTTCTCAGAAAACTATGCTTCTTCAAAATGGTGCTTGAATGAGCTCAAGAAGATTCTTGAATGCAAGAAATATAAGGAACACATTGTGATACCAGTTTTTTACAAAATAGATCCATCACATGTGAGGAACCAGACCGGGAGTTACGAGCAAGCTTTTGCAAAACATAAGCGAGATTTGAAGAGCAATAATGACAAGTTACAGGAATGGAAAGCCGCTCTCACTGAGGCAGCTAGTTTAGGCGGTTGGGACTTTCAAAATTTTGAGACTGAATCACGCTTCATTAAGGATATCGTTGAAGATGTTTTGCAGAAACTGAATCTTAAATACCCATATGAAATTAAGGCCGGGCTTGTTGGAATTGAGAAAAATTATGACCAAATTGAATCAAAGCTGAAAATTGGGTCACATGAAGTCAGAGTCCTTGGAATATGGGGCATGGGTGGCATAGGAAAGACCACCCTTGCTAGGGCTTTATATGCTAAAATGTATTCTCAATTCGAAGGTTGTTGCTTACTCAATGTAATGGATGAATCAAACAAGTATGGACTCAATGTTGTACCCAATAAACTTTTGTCTTCATTGTTAGAGGAAGAAAATATTCATCCTGATGCATCCTACATAGAAGCCCCTTTCTCCGAGAGAAGGATTGGGCGTAAAAAAGTTTTAATTGTGTTGGATGGTGTAGAAACCTTAGAGCAAATAGATGATCTTATCCCAAAAATTGATGGTCTGGGACCAGGTAGTAGGGTCATTATTACAACTAGAGATAAGCACATATTTAGTCAGGTGAGTAAATGTGAAATATATGAGCTTAAAGAATTGAACAAGCATGATTCTTTTCAGCTATTCAGTTTGACTGCCTTCAAAGAAAAACAACCTAAAATTGGATATGAAGATCTATCAGAAAGTGTAATTGCCTATTGCAAAGGTAACCCTCTGGCATTAAAAGTTTTAGGTGCAAATCTCAGTTCAAGGGGCCAAGAAGCGTGGGAAAATGAATTGAAAAAGCTCCAAAAGATTCCCAATCGAAAAATTCATAATGTGTTAAAATTGAGTTATGATGAGTTAGATCGTTGTCAAAAGGCCATATTTCTAGACATCGCATGCTTGTTGAGTGGACAGGGTAAAGATTTTGTAAGAGATCTACTGGAAGCTTCTGATTTCTTTGCAATAAGTGGGATAGACGTCCTTCTAGATAAAGCTCTCATTCAACTAGATTCAATTTTGCATGTCAAAAGGGAAGTTTGTACTATAGAAATGCATGATTTGTTACAAGAAATGGGACGGGAGATTGTTAATCAAGAATCTGAAGATCCTGGAAAACGAAGTCGACTGTGGAAAGCTGAAGAGATATCCGATGTATTAAAATATAACAAAGGAACTGAAGCTGTCGAAGGGATAACATTCGATAGTACAGATGTGGGGGATCTTTACTTGAAGTCTAATTCCTTTAGAAGGATGAAAAATTTAAGATATCTTAAAATCTATAATATATCTAGAGGAAACACATGCAATGTGTACTTTCCCGATGGTCTTGAGTGGATTTCTGATAAATTGAGGTATCTTCGATGGGAAGGATACTGTCTTGAGTCTTTGCCATCAACCTTTTGTGCTGAAATGCTCATAGAGCTTCACTTGAGTCATAGCAAGCTTAAAAAGCTATGGGATGGAGTTCAGAATCTTGTGAATCTAAACATACTTTGGCTTGAATCCTCCAAAAATCTGATTGAGATCCCAGACTTATCTAAGGCTACAAATCTTCATAGAGTATATCTTTTTCAATGTGAAAGCCTGGGTCAGCTCCATCCTTCGATCTTTTCTCTCCCTGATCTTAGATATCTAGATTTACGAGGTTGCAAAAAGATTGAAAGCCTTAAAACCAACATTCATTCAAAATCTCTTCGTGAACTCTTACTTGATGGTTGTTATTCTCTCACAGAATTTTCAGTGACATCGGATGAAATGACAGAGTTGACCTTAGGTGGCACTGCTATACGTGAATTGTCTTCATCGATTTGGCGTAATAGAAAACTTACTTCGCTTGGCCTATCCAAGTGTAACAAGCTTAACATTGTTGGGAATAAGTTATCAGATGATCATGGACTTGGGTCTGTTACAGAACTAGACCTTTCAGGGTGCACAGAAATGAATGCATTAAGTCTGTGGTCCATCCTTGATGGCATACAATCTTTAAAAGGGCTAACATTACAAGAGTGTTGCAACTTGGAATGTCTCCCTGAGAATATCCGAAACCATTCAATGCTAAAATGGCTTGATTTAGATGGTTGCAGGAAACTTGTGTCTCTAACAGAACTTCCGCCATCCCTAATAACTTTGAGTGGCATTAATTGCACTTATCTGGACACAGACTCCACTCAACGGTCATTTCTTGAGAACATGGTACAAATATACTCTAAAGACCCTTTTAAAGATGTCAATAACCTTTTCTTGCCAGGAGCACAAGTTCCTTGCAAGTTTGATTTTCAAACAATGAAGGCTTCAATAACCATTCCTCCTATTCCAAAATATAACCTGTCTGGTTTCATATTCTGCACCATTCTTTCTGAGGGCTTCCTTTTTCAGAGTCACCCCCTGCATTGTATCATCTTAGAACACGGCAAAGAAGTCGACAGGTGTATTATGTATTTTGACCTTTATATTGTGAGATTAATTTCAGATCATGTATTGTTAGGTTGGTATTGTTACAAAAGAGAAAAATTTGGAAGTAATGATTGTAAACTATCATTTCAATTCATACATAACGTAGAATTGGGGTGGTCAACGGAGGGGATCAAAGGGTGTGGGATCTTACCTGTATATAACTTAGAACATAAGTCGGATCTGGCTGGTAGGGAAATTGGTAAATTAAAATTCAGTAATCAATATTCTGACAGGTCTGATTGGTCTAACAATGAAAGTGAAGATGGCCAGGAAAATTATAATGATGAGTTACAGCCTTCAGCAATTGGAGGTGAAGTCATAAGCTCCAACATTGAAAATGAAGATGACCAGAAACATCCTTGCTGTTCAATCGGTCTTTTTTTGAGGCACTTGCTAAGAGGGTCAAAAGAATAA 3312 0.3771 MSSAFSSISSSDVVPLKKYDVFLSFRGEDTRRNFTSHLYDALSRKKVETFIDNNKLQKGDEISPALIKAIEKSHASIVIFSENYASSKWCLNELKKILECKKYKEHIVIPVFYKIDPSHVRNQTGSYEQAFAKHKRDLKSNNDKLQEWKAALTEAASLGGWDFQNFETESRFIKDIVEDVLQKLNLKYPYEIKAGLVGIEKNYDQIESKLKIGSHEVRVLGIWGMGGIGKTTLARALYAKMYSQFEGCCLLNVMDESNKYGLNVVPNKLLSSLLEEENIHPDASYIEAPFSERRIGRKKVLIVLDGVETLEQIDDLIPKIDGLGPGSRVIITTRDKHIFSQVSKCEIYELKELNKHDSFQLFSLTAFKEKQPKIGYEDLSESVIAYCKGNPLALKVLGANLSSRGQEAWENELKKLQKIPNRKIHNVLKLSYDELDRCQKAIFLDIACLLSGQGKDFVRDLLEASDFFAISGIDVLLDKALIQLDSILHVKREVCTIEMHDLLQEMGREIVNQESEDPGKRSRLWKAEEISDVLKYNKGTEAVEGITFDSTDVGDLYLKSNSFRRMKNLRYLKIYNISRGNTCNVYFPDGLEWISDKLRYLRWEGYCLESLPSTFCAEMLIELHLSHSKLKKLWDGVQNLVNLNILWLESSKNLIEIPDLSKATNLHRVYLFQCESLGQLHPSIFSLPDLRYLDLRGCKKIESLKTNIHSKSLRELLLDGCYSLTEFSVTSDEMTELTLGGTAIRELSSSIWRNRKLTSLGLSKCNKLNIVGNKLSDDHGLGSVTELDLSGCTEMNALSLWSILDGIQSLKGLTLQECCNLECLPENIRNHSMLKWLDLDGCRKLVSLTELPPSLITLSGINCTYLDTDSTQRSFLENMVQIYSKDPFKDVNNLFLPGAQVPCKFDFQTMKASITIPPIPKYNLSGFIFCTILSEGFLFQSHPLHCIILEHGKEVDRCIMYFDLYIVRLISDHVLLGWYCYKREKFGSNDCKLSFQFIHNVELGWSTEGIKGCGILPVYNLEHKSDLAGREIGKLKFSNQYSDRSDWSNNESEDGQENYNDELQPSAIGGEVISSNIENEDDQKHPCCSIGLFLRHLLRGSKE* 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1510 1103 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 1071 IPR044974 GO:0006952
Mtr3g1510 1103 Pfam TIR domain 18 197 IPR000157 GO:0007165
Mtr3g1510 1103 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 161 IPR035897 -
Mtr3g1510 1103 Pfam NB-ARC domain 200 436 IPR002182 GO:0043531
Mtr3g1510 1103 SMART till_3 18 158 IPR000157 GO:0007165
Mtr3g1510 1103 SUPERFAMILY L domain-like 499 866 - -
Mtr3g1510 1103 Gene3D - 352 436 IPR042197 -
Mtr3g1510 1103 MobiDBLite consensus disorder prediction 1041 1063 - -
Mtr3g1510 1103 Gene3D - 186 348 IPR027417 -
Mtr3g1510 1103 Gene3D - 16 185 IPR035897 -
Mtr3g1510 1103 PRINTS Disease resistance protein signature 219 234 - -
Mtr3g1510 1103 PRINTS Disease resistance protein signature 294 308 - -
Mtr3g1510 1103 PRINTS Disease resistance protein signature 387 401 - -
Mtr3g1510 1103 PRINTS Disease resistance protein signature 685 701 - -
Mtr3g1510 1103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 446 IPR027417 -
Mtr3g1510 1103 Pfam Leucine Rich Repeat 620 638 IPR011713 -
Mtr3g1510 1103 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 1071 - -
Mtr3g1510 1103 Gene3D Ribonuclease Inhibitor 550 709 IPR032675 -
Mtr3g1510 1103 Gene3D Ribonuclease Inhibitor 710 872 IPR032675 -
Mtr3g1510 1103 ProSiteProfiles TIR domain profile. 17 184 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1510 Mtr-Chr3 26781692 26787243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1510 17 862 WRKY Transcription Factor Family AT4G12020 31.739 2.76e-100 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1510 - - mtr:MTR_3g058790 1521.91