Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1509 ATGGCTAGGAAGCAAACAAACAGTGTTTTTTCTTCTTCTGTGGCATCTGTGAAAAAATATGACGTTTTTCTTAGCTTTCGAGGTGAGGATACCCGCAGAAACTTCACATGCCATCTTTATGATGCTCGGAGCCGAAAGAAAGTTGAAACCTTTATAGACAACAATGAGCTTCAAAAAGGAGATAAGATATCGCCAGCACTCATCAGAGCCATTGAGGAGTCACATGTGTCTATTGTCATCTTCTCAGAAAACTATGCTTCCTCAAAATGGTGCTTGAATGAGCTCAAAAAGATTCTTGAATGCAAGAAATATATGGTACAGATTGTGATACCTGTTTTTTACAACATAGATCCATCACATGTGAGGAAGCAGACTGGGAGTTACAAGCAAGCCTTCGCAAAACATAAGCGAGATTTGAAGAGCAATAATGACAAGTTACAGGAATGGAAAGATGCACTCACTGAGGCAGCTAGTTTAGTTGGTTGGGACTCTCAAAATTACAGACTTGTAAAATCTTCTTCCTCTCATTCATATGCTAGGATCGAATCGGACTTCATTAAGGACATTGTTAAAGATGTTTTGCGGAAACTGAATCTTAGCTACCCATGTGAAATTAAGGGGCTTGTTGGAGTTGAGAAAAATTATGACCAAATTGAGTCAATACTGAAAATTGGCTCAAATGATGTTAGAGTCCTTGGAATATGGGGCATGGGTGGCATAGGAAAGACCACTCTTGCTAGGGCTTCATATGCTATAATTTATTCTCAATTTGAAGGTTGTTGCTTTCTCAATGTAATGGATGAATCAAACAGGTATGGACATAATGTTGTATACAATAAACTTTTATCCTCATTGTTAGAGGAGGAAAATATTCATCCTGATGCATCCTACATAGAAGCCACTTTATCCAAGAGAAGGATTTCACGTAAAATTAAAGTTTTAATTGTGTTAGATGGCATAGAAACCTTAGAGCAAATAGAAGATCTTATCCTAAAAATTGATGGGCTGGGACCGGGTAGTAGGGTCATTATGACAACTAGAGATAAGCACATATTTAGTCAGTTCAGTAAATGTGAGATATATGAGGTCATGAAATTGAACAATCATGATTCTCTTCAGCTATTCAGTTTGAATGCCTTCGGAGGAAAACAGCCTAAAATTGGATATGAAGATCTATCAGAAAGTGTAATTGCCTATTGCAAAGGCAATCCTCTGGCTTTAAAAGTTTTAGGGGCAAATCTCCGCTCAAGAGGCAAAGAGGCATGGGAAAATGAATTGAAAAAGCTCGAAAAGATTCCAAATAGGAAAATTTATAACGTGTTAAAATTCAGTTATGATGACTTAGATTTTTTTCAACAGGCCATATTTTTAGATATTGCATGCTTTTTGAGAGGAGAGCATAAAATATTTATAATAGATTTGTTGGAAGCTTGTGAGTTCTTTGCAGAAAGTGGGATAGAAGTCGTTTTAGATAAAGCTCTCATACAAGTAAAACCAAATTGGCACTCGTATGCCAAGTTGGAAGTTGATAGTTTACATATACATGATTTGTTACAAGAAATGGGACAGGAGATTGTTAATCAAGAATCTATAAACCCTGGAAAACGAAGTCGGTTGTGGAGAGCTAAAGAAATATCTGATATATTAAAAGAAAACAAGGGAACTAAAGTTGGGGAAGGTATAATATTCGATAGTACGGAAGTTGGGGATCTATACTTGAAGTCTGATTCCTTTAGAAGGATGACAAACTTAAGATATCTTAAGATTCATAATATATCCAACGGGAGCATATGCAATGTACATTTTCCTGATGGTCTCGAGTGGCTTTCTGATAAATTGAGGTACCTTCAATGGGAGGGATATTGTCCTGAGTCTTTTCCATCAAACTTTTGTGCTGAAATGCTTGTAGAGCTTCACATGACTCATAGCAAGCTTAAAAAGCTCTGGGATGGAGTTCAGAATCTTGTGAATCTAATCACATTTAGCCTTAATTACTCCAAAGATCTGATTGAGATCCCAAACTTATCTAGGGCTACAAATCTTGAAAAAGTACATCTCTATAAATGTGAAAGCCTGCGTCATCTCCATCCATACATCTTTTCTCTCCCTCGACTTATTGTACTAGATTTAGGAGGTTGCATAAAGATCGAAAGCCTTAAAACCAATATTCATTCAAATTCTCTCCGAAACCTTAAACTTGATGGTTGTTCATCTCTCATGGAATTTTCAGTGACATCGGAGGAAATGACAGAGTTATCCTTATGTGGCACTGATATACATCAATTGTCTTCATCAATTTGGCGTAATACCAAAATGACTGTTATTAACCTAACTGGATGTAACAAGCTTAACATTGTCGGGAATAAGTTATCAGATGATCATGGACTTGGGTTTGTTACGGAACTAGACCTTTCAGGGTGCACAGAAATTAATGCATTAAGTTTGTGGTCCATCCTTGATGGCATACAATCTTTAAAACAGCTAAAATTGAAAGAGTGTTGCAACTTAGAAAGTCTCCCAGAGAATATCCAAAACCATTCAATGCTAGAATGGCTTGAATTAGATGATTGCAGGAACCTCGTGACTCTGATAGAGCTTCCGCCATCCCTGTTATATTTTAAAGCTGTTAATTGCACTTATCTGGACACAGATTCCACACAATGGTCATTGCTTGAAAACATGGTACGAAAGATCTTTGAAGACCCTTCTATTGAAGAAGGTGTGATAAATGCTTTCTCTTTCCTGCCAGGAGCACAAGATCCAATAATTTTTGATTTTCAGACAATCGAGGCTTCAATAACTATTCTTCCTATTAAAAAATCTGTCTTATGTGGTTTCATATTTCGCATCCTTTTTTCTGAGGGCTTCACTATTAACCACCATGCCCTTCATTGTATTATTTTTGAACGCGGAAAAGAAGTCAACAGACGTCGCATTAGTCACAATTATTTTGGGACATTAATTTCAGATCATGCATTGATATGTTGGCATGGTTACAACAGACAAGAAAATGGAAGTTATGATATTTGCAACTTATCATTTCAATTCATACTTCAAGGTCCCAATGAAGAATTACGGTGGTCAAAGGAGGGGATAAAGGGGTGTGGGGTCTTACCTGTATGGGAATATTGGGGTAGTAGCATTAGTAAGGAAATTGGTAAGTTAAAATCCATTGCTCAAGACTCTTATGTGTCTATAGCAATTGGAGGTGAAGGCAGAAGCTATAACAATGAAAATGAAGATGATCAGGAACAACCTTCTTATTCTTACAAAGTAGAGGAACAACCTTCTGTTAGACGCAGGCGCCAAGTAATTAGACCCAAGTCTGTGTAA 3333 0.3702 MARKQTNSVFSSSVASVKKYDVFLSFRGEDTRRNFTCHLYDARSRKKVETFIDNNELQKGDKISPALIRAIEESHVSIVIFSENYASSKWCLNELKKILECKKYMVQIVIPVFYNIDPSHVRKQTGSYKQAFAKHKRDLKSNNDKLQEWKDALTEAASLVGWDSQNYRLVKSSSSHSYARIESDFIKDIVKDVLRKLNLSYPCEIKGLVGVEKNYDQIESILKIGSNDVRVLGIWGMGGIGKTTLARASYAIIYSQFEGCCFLNVMDESNRYGHNVVYNKLLSSLLEEENIHPDASYIEATLSKRRISRKIKVLIVLDGIETLEQIEDLILKIDGLGPGSRVIMTTRDKHIFSQFSKCEIYEVMKLNNHDSLQLFSLNAFGGKQPKIGYEDLSESVIAYCKGNPLALKVLGANLRSRGKEAWENELKKLEKIPNRKIYNVLKFSYDDLDFFQQAIFLDIACFLRGEHKIFIIDLLEACEFFAESGIEVVLDKALIQVKPNWHSYAKLEVDSLHIHDLLQEMGQEIVNQESINPGKRSRLWRAKEISDILKENKGTKVGEGIIFDSTEVGDLYLKSDSFRRMTNLRYLKIHNISNGSICNVHFPDGLEWLSDKLRYLQWEGYCPESFPSNFCAEMLVELHMTHSKLKKLWDGVQNLVNLITFSLNYSKDLIEIPNLSRATNLEKVHLYKCESLRHLHPYIFSLPRLIVLDLGGCIKIESLKTNIHSNSLRNLKLDGCSSLMEFSVTSEEMTELSLCGTDIHQLSSSIWRNTKMTVINLTGCNKLNIVGNKLSDDHGLGFVTELDLSGCTEINALSLWSILDGIQSLKQLKLKECCNLESLPENIQNHSMLEWLELDDCRNLVTLIELPPSLLYFKAVNCTYLDTDSTQWSLLENMVRKIFEDPSIEEGVINAFSFLPGAQDPIIFDFQTIEASITILPIKKSVLCGFIFRILFSEGFTINHHALHCIIFERGKEVNRRRISHNYFGTLISDHALICWHGYNRQENGSYDICNLSFQFILQGPNEELRWSKEGIKGCGVLPVWEYWGSSISKEIGKLKSIAQDSYVSIAIGGEGRSYNNENEDDQEQPSYSYKVEEQPSVRRRRQVIRPKSV* 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1509 1110 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 1080 - -
Mtr3g1509 1110 ProSiteProfiles TIR domain profile. 18 197 IPR000157 GO:0007165
Mtr3g1509 1110 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 1080 IPR044974 GO:0006952
Mtr3g1509 1110 Gene3D Ribonuclease Inhibitor 742 900 IPR032675 -
Mtr3g1509 1110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 459 IPR027417 -
Mtr3g1509 1110 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 162 IPR035897 -
Mtr3g1509 1110 Gene3D - 16 194 IPR035897 -
Mtr3g1509 1110 Gene3D Ribonuclease Inhibitor 562 741 IPR032675 -
Mtr3g1509 1110 MobiDBLite consensus disorder prediction 1071 1110 - -
Mtr3g1509 1110 SMART till_3 19 159 IPR000157 GO:0007165
Mtr3g1509 1110 Gene3D - 365 449 IPR042197 -
Mtr3g1509 1110 SUPERFAMILY L domain-like 514 885 - -
Mtr3g1509 1110 MobiDBLite consensus disorder prediction 1075 1101 - -
Mtr3g1509 1110 Pfam NB-ARC domain 213 443 IPR002182 GO:0043531
Mtr3g1509 1110 Pfam Leucine Rich Repeat 635 653 IPR011713 -
Mtr3g1509 1110 PRINTS Disease resistance protein signature 231 246 - -
Mtr3g1509 1110 PRINTS Disease resistance protein signature 307 321 - -
Mtr3g1509 1110 PRINTS Disease resistance protein signature 400 414 - -
Mtr3g1509 1110 PRINTS Disease resistance protein signature 700 716 - -
Mtr3g1509 1110 Pfam TIR domain 19 202 IPR000157 GO:0007165
Mtr3g1509 1110 Gene3D - 195 361 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1509 Mtr-Chr3 26776040 26779952 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1509 15 877 WRKY Transcription Factor Family AT4G12020 30.866 1.28e-90 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1509 - - mtr:MTR_3g058740 1550.8