Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1508 ATGGACTGGCACCGGGTAGTGGGGTCATTATTACAACTAGATATAAACACATATTTAGTCAATTCACAAAATGTGCAAATATGTGAGGTTAAGGAATTGAACAAACATGATTCTCTTCAACTATTGAGTTTGACTATCTTCGGAGAAAAACATCCTAAAATTGGATATGAAGATCTATCAGAGAGTGTAATTGCCTATTGCAAAGGCAATCCTCTGGCTATAAAAGTTTTAGGTGCAAATCCGAGTTCAAGAAGCAAGGAAGCATGGGACAATGAATTGAAAATGCTCCAAAAGATTCCCAATAGGAAAATTTTTAATGTGTTAAAATTGAGTTATGATGACTTAGATTGTTGTCAAAAGGCCATATTTCTAGATATCGCATGCTTGTTGAGAGAAGAGCATAAAGATTTTGTAAAACATGTATTGGAAGCTTGTCGATTCTTTGCAACAATTGGGATAGAAGTCCTTCTAGATAAAGCTCTCATAGAACTAAAACTTATTTGGCATGTAAATCTGGATGTTGATACAATAGAAATGCATGTTTTGTTACAAGAAATGGGTCGGGAGATTGTTAATCAAGAATCTAAAGACCCTGGGAAAAGAAGTAGATTGTGGAGGGCTGAAGAAATATCTGAATTATTGAAAAACAACAAGTCTGATTCCTTTAGAAGGATGAAAAATATAAGATATCTTAAAATCTATAATATATCTGATGGGAGCACATGCAATGTGTACTTTCCCGATGGTCTTGAGTGGATTTCTGATAAATTGAGGTACCTTCGATGGGATGGATACTGTCTTGAATCTTTGCCATCAACCTTTTGTGCTGAAATGCTTGTAGAGATTTGCATGAGTCATAGCCTAAAAACCAATTTTCATTCAAAATCTCTCTTAGTTGATGGTTGTTCATCCCTCATGGAATTTTCGGTGACATCAGAGGAAATGACAGAGTTATCCTTACATGGCACTGCTATACGTGAATTATCTTTATCGATTTGGCGTAATTGCAAACTTACTTCTCTTGGTCTAACTGAGTGTAACAAGCTCAACACTGTTGGGAAGAAGTTATCAGATGATCATGGGCTTGGGTTTGTTACCGAACTAGACCTTTCAGGGTGCACAGAAATCGATGCATTAAGTCTGTGGTCCATCCTCGATGGTATATAG 1167 0.3633 MDWHRVVGSLLQLDINTYLVNSQNVQICEVKELNKHDSLQLLSLTIFGEKHPKIGYEDLSESVIAYCKGNPLAIKVLGANPSSRSKEAWDNELKMLQKIPNRKIFNVLKLSYDDLDCCQKAIFLDIACLLREEHKDFVKHVLEACRFFATIGIEVLLDKALIELKLIWHVNLDVDTIEMHVLLQEMGREIVNQESKDPGKRSRLWRAEEISELLKNNKSDSFRRMKNIRYLKIYNISDGSTCNVYFPDGLEWISDKLRYLRWDGYCLESLPSTFCAEMLVEICMSHSLKTNFHSKSLLVDGCSSLMEFSVTSEEMTELSLHGTAIRELSLSIWRNCKLTSLGLTECNKLNTVGKKLSDDHGLGFVTELDLSGCTEIDALSLWSILDGI* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1508 388 Pfam NB-ARC domain 25 99 IPR002182 GO:0043531
Mtr3g1508 388 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 286 385 IPR044974 GO:0006952
Mtr3g1508 388 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 287 IPR044974 GO:0006952
Mtr3g1508 388 SUPERFAMILY "Winged helix" DNA-binding domain 103 215 IPR036390 -
Mtr3g1508 388 Gene3D - 32 116 IPR042197 -
Mtr3g1508 388 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 286 385 - -
Mtr3g1508 388 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 27 287 - -
Mtr3g1508 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 126 IPR027417 -
Mtr3g1508 388 Gene3D Ribonuclease Inhibitor 209 385 IPR032675 -
Mtr3g1508 388 SUPERFAMILY L domain-like 192 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1508 Mtr-Chr3 26773398 26774736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1508 26 379 WRKY Transcription Factor Family AT5G45050 27.049 1.11e-35 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1508 - - mtr:MTR_3g058740 473.396