Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1505 ATGACAAATTTAAGATATCTTAAAATCTATAATAAATCTAGAGGAAACACGTGCAATGTGTACTTTCCCGATGGTCTTGAGTGGATTTCTGATAAATTGAGGTATCTTCGATGGGAAGGATACTGTCTTGAGTATTTGCCATCAACCTTTTGTGCTGAAATGCTCATAGAGCTTCACTTGAGTCATAGCAAGCTTAAAAAGCTATGGGATGGAGTTCAGAATCTTGTGAATCTAAACATACTTTGGCTTGAATCCTCCAAAAATCTGATTGAGATCCCAGACTTATCTAAGGCTACAAATCTTCATAGAGTATATCTTTTTCAATGTGAAAGCCTGGGTCAGCTCCATCCTTCCATCTTTTCTCTCCCTGATCTTAGATATCTAGATTTACGAGACTGCAAAAAGATTGAAAGCCTTAAAACCAACATTCATTCAAAATCTCTTCGTGAACTCTTACTCGATGGTTGTGCATCTCTCACAGAATTTTCGGTGACATCAGATGAAATGACAGAGTTGACCTTAGGTGGCACTGCTATACGTGAATTGTCTTCATCGATTTGGCGTAACAGAAAACTTACTTCGCTTGGCCTATCCGAGTGTAACAAGCTTAACATTGTTGGGAATAAGTTAACAAATGATCATGGACTTGGGTCTGTTACCGAGCTAGACCTTTTAGGGTGCACAGAAATCAATGCATTAAGTCTGTGGTCTATCCTTGATGGCATACAGTCTTTAAAATGGCTCTCATTGCATGAGTGTTGCAACATGGAATGTCTCCCCGAGAACATACAAAACCATTCAATGCTAAAAAGTCTAGCTTTAGATGATTGCAGGAAACTTGTGTCTGTAACAGAGCTTCCGCCATCCCTATTATCTTTGAGTGCCATTAATTGCACTTATCTGGACACAGACTCCACTCAACGGTCATTTCTTGAGAACATGGTACAAATCTTCTCTAAATACCCTTTTCATGCAAATGAACATGATGATTTTTATTTCTCTATCTTGCCAGGAGCACAAGTTCCTCGCAAGTTTGATTTTCAAACAATAAAGGCTTCAATAACCATTCCTCCTATTCCAAAATATAACCTGTCTGGTTTCATATTCTGCACCATTCTTTCTAAGGGCTTCCATATTTGCAATCACCCCCTGCATTGTGTCATCTTTGAAAACGGCAAAGAAGTTGAAACGTGTTTTACTTTTGCTTGCAATTATATTGGGACATTAATTTCAGATCATGTATTAATTTCAGATCATGATGTCAATGAAGAATTGTGGTGGTCAACGGAGGGGATAAAGGGGTGTGGGGTCTTACCTGTATATAACTTAGAACATAAGTCAGATCTGGATGGTAGGGAAATTGGTAAATTAAAATTCAGTGCTCAATATTCTGGTGGGCAGGAAAATTATAATGAGTTACAGCCTTCAGCAATTGGAGGTGAAGTCATAAGCTCCAACAATGAAAAAGAAGGTTTGACATCTCAACTATGTTGA 1494 0.3822 MTNLRYLKIYNKSRGNTCNVYFPDGLEWISDKLRYLRWEGYCLEYLPSTFCAEMLIELHLSHSKLKKLWDGVQNLVNLNILWLESSKNLIEIPDLSKATNLHRVYLFQCESLGQLHPSIFSLPDLRYLDLRDCKKIESLKTNIHSKSLRELLLDGCASLTEFSVTSDEMTELTLGGTAIRELSSSIWRNRKLTSLGLSECNKLNIVGNKLTNDHGLGSVTELDLLGCTEINALSLWSILDGIQSLKWLSLHECCNMECLPENIQNHSMLKSLALDDCRKLVSVTELPPSLLSLSAINCTYLDTDSTQRSFLENMVQIFSKYPFHANEHDDFYFSILPGAQVPRKFDFQTIKASITIPPIPKYNLSGFIFCTILSKGFHICNHPLHCVIFENGKEVETCFTFACNYIGTLISDHVLISDHDVNEELWWSTEGIKGCGVLPVYNLEHKSDLDGREIGKLKFSAQYSGGQENYNELQPSAIGGEVISSNNEKEGLTSQLC* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1505 497 Gene3D Ribonuclease Inhibitor 1 144 IPR032675 -
Mtr3g1505 497 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 435 IPR044974 GO:0006952
Mtr3g1505 497 Pfam Leucine Rich Repeat 55 73 IPR011713 -
Mtr3g1505 497 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 435 - -
Mtr3g1505 497 Gene3D Ribonuclease Inhibitor 145 310 IPR032675 -
Mtr3g1505 497 SUPERFAMILY L domain-like 2 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1505 Mtr-Chr3 26750959 26752752 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1505 1 287 WRKY Transcription Factor Family AT4G12020 35.690 3.20e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1505 - - mtr:MTR_3g058670 650.588