Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1503 ATGATTCCAAATGATGTTAATCAAATTTTTGAAGCTCAGTATGTATCAGAGACACAGAATGAGTGTGGTCTAAAGCACTTGGAATTCATAACCGTCACGAGCAGTGCTTTTTCCTCCATATCTTCTTCTGATGTGGTGCCACCGAAAAAATATGATGTTTTTCTTAGCTTTCGAGGTGAGGATATTCGCAGAAACTTCAGAAGCCATCTTTATGATGCTCTGATCCGAAAGAAAATTGAAACCTTTATGGACAACAATGAGCTTCAAAAAGGAGATGAGATCTCGGCAGCACTCATCAAAGCCATTGAGGAGTCACATGCATCTATTGTCATCTTCTCAGAAAACTATGCTTCCTCAAAATGGTGCTTAAATGAGCTCAAAAAGATTCTTGAATGCAAGAAATATATGGAACAGATTGTGATACCTGTTTTTTACAACATAGATCCAGCAAATGTGAGGAAGCAGACTGGAAGTTACCAGCAAGCCTTTGCAAAACATAAGCGAGATTTGAAGCACAATAACGATAAGTTGGAGAAATGGAAAGCTGCTCTCACTGATGCAGCTAATTTAGTTGGTTGGGACTCTCGAAATTATAGACTTATCAAACCTTCTTCCCCTCTTTCGTATGCTAGGACTGAATCACGCTTCATTAAGGATATTGTTGAAGATGTTTTGCGGAAACTGAATCTTAAATACCCATATGAAATTAAGGCCGGGCTTGTTGGAGTTGAGAAAAATTATGACCAAATTGAATCAAAGTTTAAAATTGGGTCAAATGATGTTAGAGTCCTTGGAATATGGGGCATGGGTGGCATACGAAAAACCACCCTTGCGAGTACTTTATATGCAAAACTTTATTCCCAATTTGAAGGCGGTTGTTTCCTTAATGTAAGGGATGAATCAAACAAGTATGGACTCAATGTTATACACAGTAAACTTTTTTCTTCATTGTTAGAGGAAGAAAATCTTCATCCTGATGCATCCTACGTAGAATCCTCTTTCTCCATGAGAAGGATTGCACGTAAGAAAGTTTTCATTGTGTTGGATGGCGTGGAAACCATACATCAAATAGCAGATCTTATCCTAAAAATTGAAGGGCTGGGACCGGGTAGTAGGGTCATTATTACAACTAGAGATAAACATATATTTAGTCAGTTCAGTAAATGTGACATATATGAAGTCAAGGAATTGAACAACCATGATTCTCTTCAGTTATTCAGTTTGAATGCCTTCGGAGAAAAACAGCCTAAAATTGGATATGAAGATCTATCAGAAAGTGTAATTTCCTATTGCAAAGGCAATCCTCTAGCTTTAAAAGTTATAGGGGCAAATCTCCGTTCAAGAGGCAAAGAGGCATGGGAAAATGAATTGAAAAAGCTCAAAAAGATTCCAAATGGGGAAATTTACAATGTGTTAAAATTGAGTTATGATGACTTAGATTTTACTGAAAAGGCCATATTTCTGGATATCGCATGCTTTTATAGAGGAAAGCATGAAATTTATGTAACACATATGTTGGAAGCTTGTGAGTTCTATGCAATAAGTGGGGTAAAAGTCCTTCTAGATAAAGCTCTCATACAACTAAAACCAATTTGGCACTGGCGTGCAGGATCGGAAGTTGATAGTTTTGAAATGCATGATTTGTTAATAGAAATGGGACAGGAGATTGTCAATCAAGAATCTAAAGACCCTGGAAAACGAAGTCGGCTGTGGAAAGCTGAAGAAATATCTGATATGTTAAAAGAAAACAAGGGAACTGATGTTGTGGAAGGTATAAAATTCCATAGTACGGAAGTTGAGGATCTATACTTGAAGCCAGATTCCTTTAAAAGGATGACAAACTTAAGATATCTTGAGATTAATAATACATCCTACAGGAGCATATGCAATGTACTGCACTTCCCTGACGGTCTCGAGTGGCTTTCTGATAAATTGAGGTACCTTCATTGGGAAAGATACTCTCTTGAGTCTTTGCCATCAACCTTTTCTGCTAAAATGCTCGTAGAGCTTCAATTGCGTCATAGCAAGCTTAAAAAGCTCTGGGAAGGAGTTCAGGATCTTGTGAATCTAACAGTTCTTTCGCTTCCAAACTCTAAAGATCTCATTGAGCTCTCAGACTTATCCAGGGCTACAAATCTTCAAAGTCTATATCTCACTCAATGTAAAAGCCTGCGTCAGCTCCATACATCCATCCTTTCTCTCCCTCGACTTGATTATCTAGATTTACGAGGTTGCATAAATATTGAAAGCCTTAAAGCCGAGATTCATTCAAAATCTCTCCGTGTACTTTTACTCAATGGTTGTTCATCTCTCACAGAATTTTCGGTGACATCGGAAGAAATGACAGAGTTATTCTTAGATGGCACTGCTATACGTGAATTGTCTTCATCGTTTTGGTGTAATACCAAACTTACTGTTCTTGACCTAATTGGATGTAACAAGCTTAACATTGTTGGGAAAAAGTTATCAGATGATCATGGATTTTTATCGGTTACACAACTAGACCTTTCAGGGTGTACAGAAATCAATGCATTAAGTCTGTGGTCCATCCTTGATGGCATACATTCTTTAAAACGGCTAACATTGAATAGGTGTTGCAACTTAGAATGTCTCCCTGTGAACATACAAAACCATTCAATGCTTGAATGGCTTGAATTAGATGATTGCAGGAAACTTGTGTCTGTAACAGACATTCCGCCATCCCTGTTATATTTAAAAGCCGTCAATTGCACTTATCTGGACACAGACGTTACACAATGGTCAATGCATAAGGACAGGGCACAAAATTTGGTTAAAGGTGTTATCAATGCTTTGCTGCCAGGAGCACAAGTTCCATTATATTTTGATTTTCAGACAATCGGGGCTTCAATATCTATTCTTCCTATTACAAAATCTGACTTGTGTGGTTTCATATTTTGCATCATTCTTTCTGAGGGCTTCACAATTCACCACCATGACCTTCATTGTATTATCTTTGAACGCGGAAAAGAAGTCGACAGACAGCGCATTAGTCACAATTATCATGGGACATTAATTTCAGATCATGTATTGATATGCTGGCATGGTTACAATAGACAAGAAAATGGAAGTTATGATTGTAACTTATCATTTAAATTCATACTTCAAGGTCCCAATGAAGAATTGTGGTGGTCAACAGAGGGGATAAAAGGGTGTGGGGTCATACCTGTATATGCCTTAGAACGTGAGTTGGAAGGTGGTGGTAGCAGTATCATTAGTAAGGAAATTGGTAAATTAAAATCCATTGCTCAAGACTCTGACAATGAAAATGAAGATGAGCAGGAACAACCTTCTGCTAGTAGACCACCTATTAAACATGTCTACGTTAGACGCAGGCGCAAATCAATTAGACCTAAGCTTGTGTAA 3384 0.3783 MIPNDVNQIFEAQYVSETQNECGLKHLEFITVTSSAFSSISSSDVVPPKKYDVFLSFRGEDIRRNFRSHLYDALIRKKIETFMDNNELQKGDEISAALIKAIEESHASIVIFSENYASSKWCLNELKKILECKKYMEQIVIPVFYNIDPANVRKQTGSYQQAFAKHKRDLKHNNDKLEKWKAALTDAANLVGWDSRNYRLIKPSSPLSYARTESRFIKDIVEDVLRKLNLKYPYEIKAGLVGVEKNYDQIESKFKIGSNDVRVLGIWGMGGIRKTTLASTLYAKLYSQFEGGCFLNVRDESNKYGLNVIHSKLFSSLLEEENLHPDASYVESSFSMRRIARKKVFIVLDGVETIHQIADLILKIEGLGPGSRVIITTRDKHIFSQFSKCDIYEVKELNNHDSLQLFSLNAFGEKQPKIGYEDLSESVISYCKGNPLALKVIGANLRSRGKEAWENELKKLKKIPNGEIYNVLKLSYDDLDFTEKAIFLDIACFYRGKHEIYVTHMLEACEFYAISGVKVLLDKALIQLKPIWHWRAGSEVDSFEMHDLLIEMGQEIVNQESKDPGKRSRLWKAEEISDMLKENKGTDVVEGIKFHSTEVEDLYLKPDSFKRMTNLRYLEINNTSYRSICNVLHFPDGLEWLSDKLRYLHWERYSLESLPSTFSAKMLVELQLRHSKLKKLWEGVQDLVNLTVLSLPNSKDLIELSDLSRATNLQSLYLTQCKSLRQLHTSILSLPRLDYLDLRGCINIESLKAEIHSKSLRVLLLNGCSSLTEFSVTSEEMTELFLDGTAIRELSSSFWCNTKLTVLDLIGCNKLNIVGKKLSDDHGFLSVTQLDLSGCTEINALSLWSILDGIHSLKRLTLNRCCNLECLPVNIQNHSMLEWLELDDCRKLVSVTDIPPSLLYLKAVNCTYLDTDVTQWSMHKDRAQNLVKGVINALLPGAQVPLYFDFQTIGASISILPITKSDLCGFIFCIILSEGFTIHHHDLHCIIFERGKEVDRQRISHNYHGTLISDHVLICWHGYNRQENGSYDCNLSFKFILQGPNEELWWSTEGIKGCGVIPVYALERELEGGGSSIISKEIGKLKSIAQDSDNENEDEQEQPSASRPPIKHVYVRRRRKSIRPKLV* 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1503 1127 Gene3D - 47 227 IPR035897 -
Mtr3g1503 1127 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 43 1101 - -
Mtr3g1503 1127 Gene3D - 228 393 IPR027417 -
Mtr3g1503 1127 Pfam NB-ARC domain 245 466 IPR002182 GO:0043531
Mtr3g1503 1127 SUPERFAMILY L domain-like 603 917 - -
Mtr3g1503 1127 PRINTS Disease resistance protein signature 263 278 - -
Mtr3g1503 1127 PRINTS Disease resistance protein signature 338 352 - -
Mtr3g1503 1127 PRINTS Disease resistance protein signature 431 445 - -
Mtr3g1503 1127 PRINTS Disease resistance protein signature 755 771 - -
Mtr3g1503 1127 ProSiteProfiles TIR domain profile. 49 228 IPR000157 GO:0007165
Mtr3g1503 1127 Pfam TIR domain 50 235 IPR000157 GO:0007165
Mtr3g1503 1127 Pfam Leucine Rich Repeat 667 685 IPR011713 -
Mtr3g1503 1127 MobiDBLite consensus disorder prediction 1088 1112 - -
Mtr3g1503 1127 SUPERFAMILY "Winged helix" DNA-binding domain 467 581 IPR036390 -
Mtr3g1503 1127 Gene3D Ribonuclease Inhibitor 579 774 IPR032675 -
Mtr3g1503 1127 Gene3D Ribonuclease Inhibitor 775 936 IPR032675 -
Mtr3g1503 1127 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 43 1101 IPR044974 GO:0006952
Mtr3g1503 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 490 IPR027417 -
Mtr3g1503 1127 Gene3D - 396 480 IPR042197 -
Mtr3g1503 1127 SMART till_3 50 190 IPR000157 GO:0007165
Mtr3g1503 1127 SUPERFAMILY Toll/Interleukin receptor TIR domain 40 193 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1503 Mtr-Chr3 26703789 26708419 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1503 32 899 WRKY Transcription Factor Family AT4G12020 30.385 2.04e-91 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1503 - - mtr:MTR_3g058740 1483