Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1499 ATGAGCAGTGCTTTTTCCTCTATATCTTCTTCTGATGTGGTCCCTAAGAAAAAATATGAAGTTTTTCTTAGCTTTCGAGGTGAGGATACTCGCAGAAACTTCACTAGCCATCTTTATGACGCTCTGAGCCGAAAGAAAATTAAAATCTTTATAGACAACAATGAGCTTCAAAAAGGAGATGAGATCTCGGCAGCACTCATCAAAGCCATTGAGGAGTCACATGCATCTATTGTCATCTTCTCAGAAAACTATGCTTCCTCAAAATGGTGCTTGAATGAGCTCAAAAAGATTCTTGAATGCAAGAAATATATGGAACAGATTGTGATACCTGTTTTTTACAACATAGATCCATCAAATGTGAGGAAGCAGACCGGGAGTTACAAGCAAGCCTTTGCAAAACATAAGCGAGATTTAAAGCACAATAATGACAAGTTGAAGAAATGGAAAGATTCTCTCACTGAGGCAGCTAATTTGGTTGGTTGGGACTCTCAAAATTATAGGAGTGACTCAGACTTCATTAAAGCCATTGTTGAAGATGTTTTGCGGAAACTGAATCCTAGATACCCATATGACATTAAAGGGCTTGTTGGAATTGAGAAAAATTACGAACAAATTGAATCAATGATGGAAATTGGGTCAAATGATGTTAAAATCATTGGAATATGGGGCATGGGTGGCATAGGAAAGACCACCATTGCTAGGACTTTATGTGGTAAACTTTATTCCCAATTTGAAGTTCTTTGCTTCCACGATGTAATGGATGAATCAAACAAGTATGGAGTCAATGGTCTACACAATAAACTTTTGTCTTCATTGTTAGAGGAAGAAAAAATTCATCCCGATGCATCCTACATTGAATCCTCTTTCTCCGTGAGAAGGATTGCACATAAAAAAGTTCTCATTGTGTTGGATGGCATGGAAACCTTAGAGAAAATAGAAGATCTTATCCAAATAATTGATGGGGTGGGACCGGGTAGTAGGGTCATCATTACAACTAGAGATAAGCACATACTAAGTCAGTTCAGTAATTGTGAAATATATGAGTTTAATGAATTGAACAAACATGATTCTCTTCAACTATTCAGTTTGTTTGCCTTCGGAGAAAAACAGCCTAAAATTGGATATGAAGATCTATCAGAAAGTGTAATTGCCTATTGCAGAGGCAACCCTTTGGCTTTAAAAGTTTTAGGTAAAAATCTCCGTTCAAGAGGCAAAATAGTATGGGAAGATGAATTGAAAAAGCTCGAAAAGATTCCAAATGGGGAAATTAACAATATGTTAAAATTGAGTTATGATAACTTAGATATTTTTCAAAAGGACATATTTCTAGATATTGCATGCTTGTTGAGAGGAGATAATAAAATGGCTGTGATACATTTGTTGGAAGCTTGTGAGTTCTTTGCAGAAAGTGGGATAGAAGTCCTTCTAGATAAAGCTCTCATACAAATAAAATCAAATTGGCTCTCGTTGGCCAAATTGCAAATTGATGGTTTAGATATGCATGATTTGTTACAAGAAATGGGATGGGAGATTGTTAATCAAGAGTCTAAAGAACCTGGAAAACGAAGTCGGTTATGGAGAGCTGAAGAAATATCTGATATATTAAAAGAAAACAAGGGAACTGAAGTTGTGGAAGGTATAATATTCGATAGTACGGATGTTGGGGATATTTACTTGAAGTCTGATTCCTTTAGAAGGATGACAAACTTAAGATATCTTAATATCTATAATGAATCTGATGGGAGCACAGGCAATGTGTACTTTCCTGACGGTCTTGAGTGGATTTCTGATAAATTGAGGTATCTTCGATGGAAAAGATATTGTCTTGAGTCTTTGCCATCAACTTTTTGTGCTGAAATGCTTGTAGAGCTTTGCATGGCTCAAAGCAAGCTTAAAAAGCTCTGGGATGGAGTTCAGAATCTTGTGAATCTAAGAACACTTTGGCTTGAATCCTCCAAAGATCTGATTGAGATCCCAGACTTATCTAGGGCTACAAATCTTGCTATTGTACTTCTCTCGGAATGTGAAAGCTTGCGTCAACTCCATCCATCCATCTTTTCTCTCCCTCAACTTCAATATCTAGACTTAAGAGAATTTTCAATGACATCGGAGGAAATGACAAAATTATCCTTATGTGACACTTCTATACATGAATTGACTTCATCGATTTGGCATAATACCAAACTTACTGTTCTTGACCTAGCTGGATGTAACAAGCTTACTATTGTTGGGAATAAGTTAACAGATGATCATGGACTGGGGTCTGTTACAGAGCTAGACCTTTCAGGGTGCACAGAAATCAATGCATCAAGTCTGTGGTCCATACTTGATGGTATACAGTCTTTAAAACGGCTAAAATTGAATGAGTGTGTCAACTTAGAGTGTCTCCCAGAGAACATGGGAAAGCATTCATTGCTTGAATGGCTTGAATTGGATGATTGCAGGAAACTTGTGTCTCTGACAGAGCTTCCGCCATCCTTGTTAGATTTTAAAGCCGTTAATTGCACTTATCTGGACACATACACTACACAGCGGTCATTCTTTGACAACATGACACCAAATTTCTTGGAAAATGAAGGTGATATCGATTTTTTCTTTTTCCTGCCAGGAGCACAAGTTCCATTAGACATTGATTTGCAGACAATCGAGGCTTCAATAACTATTCTTCCTATTACTAAATCTGTCTTGCGTGGTTTCATATTTTGCATCCTTTTTTCTGAGGGCTTCACTATTAACCGCCATGTCCTTTATTGTATCATCTTTGAATGTGGAAAAGAAGTCGACAGACGTCGCATTAGTCTCAATTATCTCGGGACATTAATTTCAGATCATGTATTGATGTGTTGGCATGGTTACAACATACAAGAAAGTGGAAGTTATGATTGTAACTTATCATTTCAATTCATACTTCAAGGTCCCAATGAAGAACTGTGGTGGTCAACAGAGGGGATAAAGGGGTGTGGGGTCTTCCCTGTAAGGAAGGTATATATGAGTAGTTGCATTAGTAAGGAAATTGGTAAATTAAAATCCATTGCTCAAGACTCTGATGTGTCTATAGCAATTGGAGGTGAAGGAAGAAGCTCAAACAATGAAAATGAATATGACCAGGAACAACCTTCTTATTCTCACAAAGAAGAGGAACAACCTTCTATTCGTAGACCTCCTATTAAACATGTATATGTTAGACGCAGGCGCAAAGTAATTAGACCCAAGTTTGTGTAA 3222 0.3724 MSSAFSSISSSDVVPKKKYEVFLSFRGEDTRRNFTSHLYDALSRKKIKIFIDNNELQKGDEISAALIKAIEESHASIVIFSENYASSKWCLNELKKILECKKYMEQIVIPVFYNIDPSNVRKQTGSYKQAFAKHKRDLKHNNDKLKKWKDSLTEAANLVGWDSQNYRSDSDFIKAIVEDVLRKLNPRYPYDIKGLVGIEKNYEQIESMMEIGSNDVKIIGIWGMGGIGKTTIARTLCGKLYSQFEVLCFHDVMDESNKYGVNGLHNKLLSSLLEEEKIHPDASYIESSFSVRRIAHKKVLIVLDGMETLEKIEDLIQIIDGVGPGSRVIITTRDKHILSQFSNCEIYEFNELNKHDSLQLFSLFAFGEKQPKIGYEDLSESVIAYCRGNPLALKVLGKNLRSRGKIVWEDELKKLEKIPNGEINNMLKLSYDNLDIFQKDIFLDIACLLRGDNKMAVIHLLEACEFFAESGIEVLLDKALIQIKSNWLSLAKLQIDGLDMHDLLQEMGWEIVNQESKEPGKRSRLWRAEEISDILKENKGTEVVEGIIFDSTDVGDIYLKSDSFRRMTNLRYLNIYNESDGSTGNVYFPDGLEWISDKLRYLRWKRYCLESLPSTFCAEMLVELCMAQSKLKKLWDGVQNLVNLRTLWLESSKDLIEIPDLSRATNLAIVLLSECESLRQLHPSIFSLPQLQYLDLREFSMTSEEMTKLSLCDTSIHELTSSIWHNTKLTVLDLAGCNKLTIVGNKLTDDHGLGSVTELDLSGCTEINASSLWSILDGIQSLKRLKLNECVNLECLPENMGKHSLLEWLELDDCRKLVSLTELPPSLLDFKAVNCTYLDTYTTQRSFFDNMTPNFLENEGDIDFFFFLPGAQVPLDIDLQTIEASITILPITKSVLRGFIFCILFSEGFTINRHVLYCIIFECGKEVDRRRISLNYLGTLISDHVLMCWHGYNIQESGSYDCNLSFQFILQGPNEELWWSTEGIKGCGVFPVRKVYMSSCISKEIGKLKSIAQDSDVSIAIGGEGRSSNNENEYDQEQPSYSHKEEEQPSIRRPPIKHVYVRRRRKVIRPKFV* 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1499 1073 MobiDBLite consensus disorder prediction 1022 1036 - -
Mtr3g1499 1073 Gene3D - 351 435 IPR042197 -
Mtr3g1499 1073 MobiDBLite consensus disorder prediction 1037 1053 - -
Mtr3g1499 1073 PRINTS Disease resistance protein signature 218 233 - -
Mtr3g1499 1073 PRINTS Disease resistance protein signature 293 307 - -
Mtr3g1499 1073 PRINTS Disease resistance protein signature 386 400 - -
Mtr3g1499 1073 PRINTS Disease resistance protein signature 724 740 - -
Mtr3g1499 1073 SMART till_3 18 158 IPR000157 GO:0007165
Mtr3g1499 1073 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 1031 IPR044974 GO:0006952
Mtr3g1499 1073 MobiDBLite consensus disorder prediction 1022 1055 - -
Mtr3g1499 1073 ProSiteProfiles TIR domain profile. 17 184 IPR000157 GO:0007165
Mtr3g1499 1073 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 1031 - -
Mtr3g1499 1073 Pfam NB-ARC domain 206 431 IPR002182 GO:0043531
Mtr3g1499 1073 Gene3D - 182 347 IPR027417 -
Mtr3g1499 1073 SUPERFAMILY L domain-like 500 827 - -
Mtr3g1499 1073 Gene3D - 13 181 IPR035897 -
Mtr3g1499 1073 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 445 IPR027417 -
Mtr3g1499 1073 Pfam TIR domain 18 194 IPR000157 GO:0007165
Mtr3g1499 1073 Pfam Leucine Rich Repeat 621 639 IPR011713 -
Mtr3g1499 1073 Gene3D Ribonuclease Inhibitor 556 703 IPR032675 -
Mtr3g1499 1073 Gene3D Ribonuclease Inhibitor 704 840 IPR032675 -
Mtr3g1499 1073 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 161 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1499 Mtr-Chr3 26632097 26636746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1499 17 834 WRKY Transcription Factor Family AT4G12020 30.118 3.50e-83 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1499 - - mtr:MTR_3g058740 2066.97