Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1498 ATGAGCAGTGCTTTTTCCTCTGTATCCTCTTCCTCTGTGGCGCCTCAGAAAAAATATGACGTTTTTCTTAGCTTTCGAGGTGATGATACTCGCAGAAACTTCACGAGCCATCTTTATGATACTCTGAGCCGAAAAAAAGTTGAAACCTTTATAGACAACAATGAGCTTGAAAAAGGAGATGAGATCTCACCAGCACTCATCAAAGCCATTGAGGAGTCACACGTGTCAATTATCATCTTCTCAGAAAATTATGCTTCCTCAAAATGGTGCTTGAATGAGCTCAAGAAGATTCTTCAATGCAAGAAATATATGCAACAGATTGTGATACCTGTTTTTTACAACATAGATCCCTCACATGTGAGGAAGCAGACTGGGAGTTACGAGCAAGCCTTCACAAAACATATGCGAGATTTGAAGCTCAATAATGACAAGTTACAGGAATGGAAAGCCGCTCTTGCCGAGGCAGCTAGTTTAGTTGGTTGGGACTTTCAGAATTACAGCACTGAATCAGACTTCATTAAGGACATTGTCAAAGATGTCTTGCAGAAGCTGAATCTTAGATACCCATATGAAATTAAGGGGATTGTTGGAATTGAGAAAACTTATGAGCAGATTGATTCAATGCTGAAAATTTGGTCAAATGATGTCAGAGTCCTTGGAATATGGGGCATGGGTGGCATAGGAAAGACCACCCTTGCTAAGACTTTATATGGTAAACTTTATTCCCAATTTGAAGGTCGTTGCTTCCTCAATGTAATGGATGAATCAAAAAAGCATGGACTCGATGTTTTATACAATAAACTTCTGTCTTCATTGTTAGAGGAAGAAAATCTTCATCCTTATGCATCCTACATAGAATCCCCTTTCTCCGTGAGAAGGATTGCACGTAAAAAAGTTTTCATTGTGTTGGATAGTGTGGACACCTTAGAGAAAATAGAAGATCTTATCCTAAATATTGATGGGTTGGGAGCAGGTAGTAGGGTCATTATTACAACTAGAGATAAGCACATACTAAGTCAGTTCAGTAATTGTGAAATATATGAAGTCAAGGAATTGAACAACCATGATTCTCTTCAGTTATTCAGTTTGAATGCCTTCGGAGAAAAACAGCCTAAAATTGGATATGAAGATATATCAGAAAGTGTAATTGCCTATTGCAGAGGCAACCCTTTGGCTTTAAAAGTTTTAGGTAAAAATCTCCGTTCAAGAGGCAAAAAAGTATGGGAAGATGAATTGAAAAAGCTTGAAAAGATTCCAAATGGGGAAATTAACAATATGTTAAAATTGAGTTATGATAACTTAGATATTTTTCAAAAGGACATATTTCTAGATATCGCATGCTTGTTGAGAGGAGATAATAAAATATTTGTGATACATTTCTTGGAAGCTTGTGAGTTCTTTGCAGAAAGTGGGATAGAAGTCCTTCTAGATAAAGCTTTCATACAAATAAAACCATATTGGCACTCGTTTGCCAAATTGGAAATTGATGGTTTAGATATGCATGATTTGTTACAAGAAATGGGACGGGAGATTGTTAATCAAGAGTCTAAAGAACCTGGAAAACGAAGTCGGTTATGGAGAGCTGAAGAAATATCTGATATATTAAAAGAAAACAAGGGAACTGAAGTTGTGGAAGGTATAATATTGGATAGTACGGAAGTTGGGGATCTATACTTGAAGTCTGATTCCTTTAGAAGGATGACAAATTTAAGATATCTTAATATCTATGAATCTGATGGGAGCACAGGCAATGTGTACTTTCCTGACGGTCTTGAGTGGATTTCGGATAAATTGAGGTATCTTCGATGGAAAAGATACTGTCTTGAGTCTTTGCCATCAACCTTTTGTGCTGAAATGCTTGTAGAGCTTTGCATGAATCAAAGCAAGCTTAAAAAGCTCTGGGATGGAGTTCAGAATCTTGTGAATCTAAGAGTACTTTGGCTTGAATCCTCCAAAGATCTGATTGAGATCCCAGACTTATCTAGGGCTATAAATCTTGACAGAATACATCTCTCGGAATGTGAAAGCCTGCGTCAGCTCCATCCATCCATCTTTTCTCTCCCTCGAATTATATATCTAGATTTAAGAGAATTTTCGGTGACATCGGAAGAAATGACAGAGTTATTCTTAGATGGCACTGCTATACGTGAATTGTCTTCATCGTTTTGGTGTAATACCAAACTTACTGTTCTTGACCTAATTGGATGTAACAAGCTTAACATTGTTGGGAAAAAGTTATCAGATGATCATGGACTTTTGTCGGTTACAGAACTAGACCTTTCAGGGTGCACAGAAATCAATGCATTAAGTCTGTGGTCCATCCTTGATGGTATACAGTCTTTAAAACGGCTAAAATTGAATGAGTGTGTCAACTTAGAATGTCTCCCAGAGAACATGCGAAACCATTCAATGCTAGAATGGCTTGAATTGGATGATTGCAGGAAACTTGTGTCTCTGACAGAGCTTCCGCCATCCCTGTTTTCTTTAACAGCCGTTAATTGCACATATCTGGACACATACTTCACACAATTTTCATTGATTAAGAACAGGGCAGAAAAGTTCTTTGAAGACGGTTCTATTGAAGATGAAGGTGTTATCGATGCTTTCTCTTTCCTGCCAGGTGCACAAATTCCATTAAATTTTGATTTTCAGACAATCAAGGCTTCAATAAGTATTCTTCCTATTGCTAAATCTGACTTGTGTGGTTTCATATTTTGCATCCTTTTTTCTGAGGGCTTCACTGTTAACAACCATGTCCTTCATTGTATTATCTTTGAATGCGGAAAAGAAGTCGACAGACGTCGCATTAGTCTCAATTATCTCGGGACATTAATTTCAGATCATGTATTGATATGGTGGCATGGTTACAACATACAAGAAAGTGGAAGTTATGATTGTAACTTATCATTTCAATTCATACTTCAAGGTCCCAATGAAGAATTACAGTGGTCAACGGAGGGTATAAAGGGGTGTGGGGTCGAACCGGTATATATGAGTAGTAGCATTAGTAAGGAAATTGGTAAATTAAAATCCATTGCTCAAGACTCTGATGTGTCTATAGCAATTGGAGGTGAAGGTAGAAGCTCCAACAATGAAAATGAAGATGACAAGGAACAACCTTTCTATTAG 3129 0.3749 MSSAFSSVSSSSVAPQKKYDVFLSFRGDDTRRNFTSHLYDTLSRKKVETFIDNNELEKGDEISPALIKAIEESHVSIIIFSENYASSKWCLNELKKILQCKKYMQQIVIPVFYNIDPSHVRKQTGSYEQAFTKHMRDLKLNNDKLQEWKAALAEAASLVGWDFQNYSTESDFIKDIVKDVLQKLNLRYPYEIKGIVGIEKTYEQIDSMLKIWSNDVRVLGIWGMGGIGKTTLAKTLYGKLYSQFEGRCFLNVMDESKKHGLDVLYNKLLSSLLEEENLHPYASYIESPFSVRRIARKKVFIVLDSVDTLEKIEDLILNIDGLGAGSRVIITTRDKHILSQFSNCEIYEVKELNNHDSLQLFSLNAFGEKQPKIGYEDISESVIAYCRGNPLALKVLGKNLRSRGKKVWEDELKKLEKIPNGEINNMLKLSYDNLDIFQKDIFLDIACLLRGDNKIFVIHFLEACEFFAESGIEVLLDKAFIQIKPYWHSFAKLEIDGLDMHDLLQEMGREIVNQESKEPGKRSRLWRAEEISDILKENKGTEVVEGIILDSTEVGDLYLKSDSFRRMTNLRYLNIYESDGSTGNVYFPDGLEWISDKLRYLRWKRYCLESLPSTFCAEMLVELCMNQSKLKKLWDGVQNLVNLRVLWLESSKDLIEIPDLSRAINLDRIHLSECESLRQLHPSIFSLPRIIYLDLREFSVTSEEMTELFLDGTAIRELSSSFWCNTKLTVLDLIGCNKLNIVGKKLSDDHGLLSVTELDLSGCTEINALSLWSILDGIQSLKRLKLNECVNLECLPENMRNHSMLEWLELDDCRKLVSLTELPPSLFSLTAVNCTYLDTYFTQFSLIKNRAEKFFEDGSIEDEGVIDAFSFLPGAQIPLNFDFQTIKASISILPIAKSDLCGFIFCILFSEGFTVNNHVLHCIIFECGKEVDRRRISLNYLGTLISDHVLIWWHGYNIQESGSYDCNLSFQFILQGPNEELQWSTEGIKGCGVEPVYMSSSISKEIGKLKSIAQDSDVSIAIGGEGRSSNNENEDDKEQPFY* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1498 1042 Gene3D Ribonuclease Inhibitor 545 701 IPR032675 -
Mtr3g1498 1042 Gene3D Ribonuclease Inhibitor 702 839 IPR032675 -
Mtr3g1498 1042 SMART till_3 18 158 IPR000157 GO:0007165
Mtr3g1498 1042 Gene3D - 351 435 IPR042197 -
Mtr3g1498 1042 Pfam Leucine Rich Repeat 620 638 IPR011713 -
Mtr3g1498 1042 Pfam NB-ARC domain 199 431 IPR002182 GO:0043531
Mtr3g1498 1042 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 695 1036 IPR044974 GO:0006952
Mtr3g1498 1042 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 696 IPR044974 GO:0006952
Mtr3g1498 1042 PRINTS Disease resistance protein signature 218 233 - -
Mtr3g1498 1042 PRINTS Disease resistance protein signature 293 307 - -
Mtr3g1498 1042 PRINTS Disease resistance protein signature 386 400 - -
Mtr3g1498 1042 PRINTS Disease resistance protein signature 750 766 - -
Mtr3g1498 1042 MobiDBLite consensus disorder prediction 1020 1042 - -
Mtr3g1498 1042 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 695 1036 - -
Mtr3g1498 1042 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 696 - -
Mtr3g1498 1042 Gene3D - 12 181 IPR035897 -
Mtr3g1498 1042 Gene3D - 182 347 IPR027417 -
Mtr3g1498 1042 Pfam TIR domain 18 189 IPR000157 GO:0007165
Mtr3g1498 1042 ProSiteProfiles TIR domain profile. 17 184 IPR000157 GO:0007165
Mtr3g1498 1042 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 161 IPR035897 -
Mtr3g1498 1042 SUPERFAMILY L domain-like 500 832 - -
Mtr3g1498 1042 SMART AAA_5 215 352 IPR003593 -
Mtr3g1498 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 445 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1498 Mtr-Chr3 26590682 26595720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1498 17 833 WRKY Transcription Factor Family AT4G12020 30.941 6.59e-87 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1498 - - mtr:MTR_3g058740 1694.48