Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1476 ATGGCTCTACTAGTCATCTACTTGTCATATATTTTCTCCTTTGTCCTCTTAGCCCTTATTCTACAAAAAGTAGAAAAGAAGTTCAAGAACACAGACTCAACTTTTAACCTCCCTAAAGGGCCTATAAAGCTACCTATTATAGGAAATTTACACAATCTGTTAAGTTCTCAACCACATAAAAAACTAAGAGATTTGGCTAGAAAATATGGACCCTTGATGCATCTTCAACTTGGAGAGATTTCCATGATTGTAATTTCATCACCTGATTGTGCTAGGGAGGTGATGAAAACTCATGATATTAACTTTGCAATAAGGCCTAAAGTCCTAGCTTCAGATTTAATTTCTTATAATTCCACAGGCATAATTTCATCTCCTTATGGTAATTATTGGAGACAGCTAAGAAAAATTTGTGCCTCGGAGCTTTTGAGCCTAAAACGCGTCAACTCATACCAGCCAATTAGAGAAGAAGAGTTCTCCAATCTTGTCAAATGGATAACTTCAAAGAAAGGATCATCCATCAACCTCACTCAAGCTGTACTTTCTTCAATATACACTATTCTTTCAAAATCTGCATTTGGCAAGAAGTGCAACGACCAAGACAAATTTATATCAGCAGTAAAAGAGTTAATAAAGATTGCAGCAGGTTTTGACTTAGAAGACTTGTTTCCTTCGATTACTTGGCTGCATTATTTCACTGGTTTAAGGCCTACCCTTGAGAGGGTGCATCGACAGGTTGATCAGATAATGGAAAACATCATCAGTGAGCACAAGGAGGCCAAGTCAAAAGCCAACTATGACCAAGGTGAATCAGATGAAGATATAGTAGATGTTCTCATAAAATACGAAGACGGAAACAACAAAGAATTTTTTTTAACTAAAGACAATATCAAGGCCATAATCCTGGACATTTTTGGTGCTGGAGGTGAGACATCAGCAAGCACCATAGATTGGGCAATGGTAGAAATGATAAGGGATCCAAGAATAATGAAGAAAGTGCAAGATGAGGTGAGAGAGGTTTTCAAAATGAAAGGAAGGGTTGATGAAAATTGCATCAACGAGCTCCATTATTTGAAATCAATCGTCAAAGAAACCTTGAGGTTACACACTCCGGTGCCTCTTTTGCTACCAAGAGAGTGTGGTCAAGCATGTGAGATACATGGTTATCACATACCATTTAAGACTAAGGTGGTCGTCAATGCATGGGCAATCGCGAGAGATCCAAACTACTGGACTGAACCAGAGAAATTTTATCCAGAGAGATTCATGGGAAACACTATTGACTATAAAGGGAGTGATTTTGAGTACATTCCTTTTGGTGCGGGACGAAGAATATGCCCAGGAAGCATATTTGGTTTGAGAAATGTTGAGTTGACCCTTGCAACATTGTTGTTTTATTTTGATTGGAAGCTTCCGAGTGGAATTAGAAGTGAAGAATTGGATATGACCGAGGAATTTGGAGTCGCAGTGAGAAGAAAAGATGATCTTTTATTGTTGCCTTTTGTTTGTCATCCTTTGCCTGTCATGTGA 1527 0.3824 MALLVIYLSYIFSFVLLALILQKVEKKFKNTDSTFNLPKGPIKLPIIGNLHNLLSSQPHKKLRDLARKYGPLMHLQLGEISMIVISSPDCAREVMKTHDINFAIRPKVLASDLISYNSTGIISSPYGNYWRQLRKICASELLSLKRVNSYQPIREEEFSNLVKWITSKKGSSINLTQAVLSSIYTILSKSAFGKKCNDQDKFISAVKELIKIAAGFDLEDLFPSITWLHYFTGLRPTLERVHRQVDQIMENIISEHKEAKSKANYDQGESDEDIVDVLIKYEDGNNKEFFLTKDNIKAIILDIFGAGGETSASTIDWAMVEMIRDPRIMKKVQDEVREVFKMKGRVDENCINELHYLKSIVKETLRLHTPVPLLLPRECGQACEIHGYHIPFKTKVVVNAWAIARDPNYWTEPEKFYPERFMGNTIDYKGSDFEYIPFGAGRRICPGSIFGLRNVELTLATLLFYFDWKLPSGIRSEELDMTEEFGVAVRRKDDLLLLPFVCHPLPVM* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1476 508 Pfam Cytochrome P450 38 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Mtr3g1476 508 SUPERFAMILY Cytochrome P450 38 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 PANTHER CYTOCHROME P450 71B11-RELATED 8 504 - -
Mtr3g1476 508 Gene3D Cytochrome P450 31 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1476 508 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1476 Mtr-Chr3 26353563 26355662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1476 15 499 Cytochrome P450 AT3G26310 41.449 5.27e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1476 - - gmx:100778572 781.556