Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1472 ATGGCTCTACTAATCCTCTACTTGCCATATATTTTCTCCTTTATCCTCTTAACCCTTGTAGTACAAAAGATAGGAAACAAGAAAAGTTACTCGACTTATAACATACCACCAGGGCCTATAAAGTTACCTATTATAGGAAATATACACAATCTGTTAACCTCTCAACCCCATCGAAAACTAAGAGACTTGGCCAAAAAATATGGACCCCTGATGCATCTTCAACTTGGAGAGGTTTCTGCTATGGTCATTTCATCGCCCGAGTGTGCTGGCGAGGTAATGAAAACCCATGATATTCACTTTGCATCAAGGCCTCAAATCCTGGCTACAGAAATAATGTCTTACAATTCTACAAATATAGCTTTTGCTCCGTATGGTAATTATTGGAGACAGCTACGGAAAATTTGCACATTGGAGCTTTTGAGCCTAAAAAGGGTTAACTCATATCAACCAATTAGAGAAGAAGTGTTTTCCAATCTTGTCAAATGGATTGCTTCACGGGACGGAATTCCAATCAACATTACTGAAGCTGTACGTTCTTCAATATACACAATTGTTTCAAGGGCTGCCTTTGGCAATGAATGCAAGGACCAAGACAAATTTATATCAGTGGTAAAACAATCAATAAAGGTTGCCGGGGGTTTTGACTTGGGAGATTTGTTTCCCTCAGCTAAATGGTTACAGCTTGTTACTGGTATGAGGCCTAAGCTTGAGAGGTTTCATCGACAAACTGATCAGATATTAGAAAACATCATCAATGAGCATAAAGAGGAAAAGTACACAAAAGCCAAAGATGATCAAGGTAAAGTAGAAGAAGATCTCGTAGACGTTCTCTTAAAATATGAGGACGGTAGCAACCAGGAGTTTACCTTAACAAAAAACAATATCAAGGCCATAATCCTGGACGTTTTTGGTGCTGGAGGTGAGACATCAGCAAGCACCATAGACTGGGCAATGGTAGAAATGATAAGGGATCCAAGAATAATGAAGAAAGCGCAAGATGAGGTGAGAGAGGTTTTCAAAATGAAAGGAAGGGTTGATGAAAATTGCATCAATGAACTCAATTATTTGAAGTCAGTTGTCAAAGAAACCCTGAGGTTACACCCTCCAACACCTCTTTTGCTGCCAAGAGAATGTCGTCAAACATGTGAGATAAATGGTTATCACATACCTATTAAGAGTAAGGTGATAGTCAATGCTTGGGCAATTGCAAGAGATCCAAATTACTGGACTGAGCCGGAGAGATTTTATCCAGAGAGATTCCTTGACAGCGCCATTGACTATAAAGGAAGTAATTATGAGTACATTCCTTTTGGTGCCGGAAGAAGAATATGCCCAGGGAGCACATTTGGTTTGAGAAGTATTGAGCTGGCCCTTGCAATGTTGTTGTATCATTTTGACTGGAAGCTTCCAAGTGGAATCAGAAGTGAAGACTTGGATATGACTGATGAATTCGGAGCCACAATGAGAAGAAAAGATGATCTTTTATTGTTTTCTTTTGTTTATCATCCTTTGTAA 1515 0.3927 MALLILYLPYIFSFILLTLVVQKIGNKKSYSTYNIPPGPIKLPIIGNIHNLLTSQPHRKLRDLAKKYGPLMHLQLGEVSAMVISSPECAGEVMKTHDIHFASRPQILATEIMSYNSTNIAFAPYGNYWRQLRKICTLELLSLKRVNSYQPIREEVFSNLVKWIASRDGIPINITEAVRSSIYTIVSRAAFGNECKDQDKFISVVKQSIKVAGGFDLGDLFPSAKWLQLVTGMRPKLERFHRQTDQILENIINEHKEEKYTKAKDDQGKVEEDLVDVLLKYEDGSNQEFTLTKNNIKAIILDVFGAGGETSASTIDWAMVEMIRDPRIMKKAQDEVREVFKMKGRVDENCINELNYLKSVVKETLRLHPPTPLLLPRECRQTCEINGYHIPIKSKVIVNAWAIARDPNYWTEPERFYPERFLDSAIDYKGSNYEYIPFGAGRRICPGSTFGLRSIELALAMLLYHFDWKLPSGIRSEDLDMTDEFGATMRRKDDLLLFSFVYHPL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1472 504 Gene3D Cytochrome P450 29 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 Pfam Cytochrome P450 36 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 PANTHER CYTOCHROME P450 71B11-RELATED 8 502 - -
Mtr3g1472 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Mtr3g1472 504 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1472 504 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1472 Mtr-Chr3 26265851 26267727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1472 10 496 Cytochrome P450 AT3G26310 41.483 2.62e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1472 - - gmx:100778572 769.615