Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1469 ATGGCTTTACTAGTCCTCTACTTGTCATATATTTTCTTCTTTATTCTCTTAGCCATTGTTGTACAAAAAGTAGGAAAGAAGCTCAAGAACACAGACCCTTTTAACCTCCCTAATGGACCTAGAAAGCTACCAATTATAGGAAATATACACAATCTGTTAAGCTCTCAACCACATCGAAAACTACGAGACTTGGCAAGAGAATATGGACCCTTGATGCATCTCCAACTTGGAGAGATTTCCTTTATTGTCATTTCATCACCAGACTGTGCTAGGGAGGTGATGAAAACTCATGATATTAACTTTGCAACCAGGCCTCAAGGCCTATCTTCAGATTTAATTGCTTACAATTCCACAGGTATAGTTTCTTCTCCTTATGGTAATTATTGGAGACAGTTAAGAAAAATTTGCACATTGGAGCTTTTGAGCCTAAAACGCGTCAACTCCTACCAGCCGATTAGAGAAGAAGAGTTCTCCAATCTTGTCAAATGGATTGCTTCGAAGGAAGGATCACCCATCAACCTCACTCAAGCTGTACTTTCTTCAATATACACTATTGTTTCAAAATCTGCCTTTGGCAAGAAATTCAAAGACCAAGAAAAATTTATATCAGCAGAAAAAGAGATATTAAAGATTGCAGCAGGTTTTGACTTAGCAGAGTTATTTCCTTCCATTACATGGATGCATTTTTTTACTGGTTTAAGGCCTAAGCTTGAAAGGGTGCATAGGGTGGTGGATCAGATAATGGAAAACATCATCAATGAGCACAAAGAGGCCAAGTCAAAGGGAGAATTTGACCAAGTTGAATCAGACGAAGATCTGGTAGATGTTCTCTTAAAATATCAAGATGGCAATAACAAGGAATTTTTCTTAACTATAGACAATATCAAGGCCATAATCATGGACATTTTTGGTGCTGGAGGTGAGACATCAGCAAGCACCATAGATTGGGCAATGGCAGAAATGGTAAAGAATCCAAGAATAATGAAGAAAGCACAAGCTGAGGTGCGAGAGATTTTCAATATGAAAGGAAGGGTTGAAGAGAATTGTATCAATGAACTTAATTATTTGAAATCAATTGTCAAAGAAACCCTGAGGTTACACCCTCCGGCACCACTTTTAATACCGAGAGAATGTGCTCAATCATGTAAGATAGACGGTTATGACATTCCAACTAAGACTAAGGTGATAGTCAATGCTTGGGCAATTGCAAGAGATCCAAATTACTGGACCGAACCAGAGAGGTTTTATCCAGAGAGATTCATCGATAGTGATATTGACTATAAAGGGAGTAACTTTGAGTATATTCCTTTTGGTGCGGGACGAAGAATATGTCCAGGGAGCATATTTGGTTTGCGAAGTGTTGAGCTAGCCCTTGCAAAGTTGTTGTACCATTTTGATTGGAAGCTTCCTAATGGAATCAAAAGTGAAGAATTGGACATGACTGAGAAATTTGGTATCACAGTGTGTAGAAAAGATGATCTATTATTGTTACCTTCTGTTTATCATCATTTGCCTGTTAAGTGA 1524 0.3812 MALLVLYLSYIFFFILLAIVVQKVGKKLKNTDPFNLPNGPRKLPIIGNIHNLLSSQPHRKLRDLAREYGPLMHLQLGEISFIVISSPDCAREVMKTHDINFATRPQGLSSDLIAYNSTGIVSSPYGNYWRQLRKICTLELLSLKRVNSYQPIREEEFSNLVKWIASKEGSPINLTQAVLSSIYTIVSKSAFGKKFKDQEKFISAEKEILKIAAGFDLAELFPSITWMHFFTGLRPKLERVHRVVDQIMENIINEHKEAKSKGEFDQVESDEDLVDVLLKYQDGNNKEFFLTIDNIKAIIMDIFGAGGETSASTIDWAMAEMVKNPRIMKKAQAEVREIFNMKGRVEENCINELNYLKSIVKETLRLHPPAPLLIPRECAQSCKIDGYDIPTKTKVIVNAWAIARDPNYWTEPERFYPERFIDSDIDYKGSNFEYIPFGAGRRICPGSIFGLRSVELALAKLLYHFDWKLPNGIKSEELDMTEKFGITVCRKDDLLLLPSVYHHLPVK* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1469 507 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1469 507 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1469 507 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1469 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Mtr3g1469 507 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1469 507 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1469 507 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1469 507 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1469 507 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1469 507 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1469 507 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1469 507 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1469 507 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1469 507 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 504 - -
Mtr3g1469 507 Coils Coil 328 348 - -
Mtr3g1469 507 Gene3D Cytochrome P450 31 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1469 507 PANTHER CYTOCHROME P450 71B11-RELATED 8 504 - -
Mtr3g1469 507 Pfam Cytochrome P450 37 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1469 507 SUPERFAMILY Cytochrome P450 37 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1469 Mtr-Chr3 26251011 26253060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1469 5 500 Cytochrome P450 AT3G26310 41.454 3.88e-138 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1469 - - gmx:100778572 763.066