Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1460 ATGGATCTTCAAACAATTTACACTTTAACCCTGTTTTCCATTTTCGTACTCTCCATTATTGTGACACTAAAATTAAGGAAGAAAATCACGAAAATTGACTCAATTGCAAATATACCACCAGGGCCATGGAAGCTACCAATCATTGGAAACATACATAATCTTATTGGCTCTCCACCACATAGAAAATTAAGAGAATTGTCAACAAAATATGGTGCTTTAATGCATCTTCAACTTGGTGAAGTTTTATTTACTATTGTATCCTCAGCAGAATATGCTAAGGAAATAATGAAAACTCATGATGTTATATTTGCGTCAAGGCCTTTAACACTAACCTCAGAGATAATGTTTTATGGTTCAACAGATATAGCTTTTTCACCATATGGTGATTATTGGAGACAGCTTAGAAAGATTTGTACCGTTGAACTTTTAAGTATAAAACGTGTTCAGTCTCTTTGGCCAATTAGAGAACAAGAGATTAAAAATCTTGTCAGTAGGATTGCTTCCGATGAAGGAAGAGTCGTCAATCTTTCTCAACAAGTTATGTCAATGATGTTTTCTATCACTTCAAGGGCTGCATTCGGCAAAAAGTACAAAGAACAAGATGAGTTTATATCGGCAGTAAGATACATGTTGCAGATAGCAGGAGGTTTCTACATCGGAGACTTGTTTCCTTCAGCGAAATGGCTTCAAAACTTCACTGGAAGGAGGCCTAAGCTTGAGAAGCTGCATCAAAAAGTTGATAGAATACTTGAGATGATCATCAATGACCATAAAGAGAAAAATTCAGGAGATAAAGAAGGTCTAGTAGGAGGGGAAGATTTGACTGATATTCTCTTGAAATTTGAGGATGGTAGCGACAATAATCTGGATTTTTGCTTAACTAAGAACAATATCAAAGCTATAATCTTTGATATCTTCACCGCTGGAAGTGACACTGCAGCAACGACAATAAACTGGGCTATGGCTGAGATGATGAAGGATCAAAGAGTATTGAAGAAAGCACAAGCTGAAGTAAGAGTGTTATTATATAAAAGAGGAAAATTTGATGAAACCTTAATTTCTGAGTTAAAATACTTGAAAGTAATCATCAAAGAGGTCTTAAGAATGCACCCTCCTGGTCCTCTTTTAGTACCAAGGGTGTGTGGACAAGCTTGTGAGATTGATGGTTATCACATACCAATCAAAAGTAGGGTGATAATCAATGCTTGGGCAATTGGAAGGGATCCAAAATATTGGACTGATCCAGATAAGTTTTATCCTGAAAGATTTATTGATAGTTCTCTTGATTTCAAAGGAACAAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATTTGTCCAGGCATTAACTATGGTATGGCAAATGTTGAACTGACACTTGCTTTCTTATTGTCTCACTTTGATTGGAAGCTTCCTGGTGGAATGAAATGTGAGGATTTGGATATGACTGAGCTATTTGGAGCTTCTGTTATAAGAAAAGATGACATGTATTTGATTCCAACCAATTATTTCACTGAAATAGTGTTAAAAAATGAAAGGTTTTTATGGAATTGA 1557 0.3558 MDLQTIYTLTLFSIFVLSIIVTLKLRKKITKIDSIANIPPGPWKLPIIGNIHNLIGSPPHRKLRELSTKYGALMHLQLGEVLFTIVSSAEYAKEIMKTHDVIFASRPLTLTSEIMFYGSTDIAFSPYGDYWRQLRKICTVELLSIKRVQSLWPIREQEIKNLVSRIASDEGRVVNLSQQVMSMMFSITSRAAFGKKYKEQDEFISAVRYMLQIAGGFYIGDLFPSAKWLQNFTGRRPKLEKLHQKVDRILEMIINDHKEKNSGDKEGLVGGEDLTDILLKFEDGSDNNLDFCLTKNNIKAIIFDIFTAGSDTAATTINWAMAEMMKDQRVLKKAQAEVRVLLYKRGKFDETLISELKYLKVIIKEVLRMHPPGPLLVPRVCGQACEIDGYHIPIKSRVIINAWAIGRDPKYWTDPDKFYPERFIDSSLDFKGTNFEYIPFGAGRRICPGINYGMANVELTLAFLLSHFDWKLPGGMKCEDLDMTELFGASVIRKDDMYLIPTNYFTEIVLKNERFLWN* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1460 518 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 12 506 - -
Mtr3g1460 518 SUPERFAMILY Cytochrome P450 39 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 Pfam Cytochrome P450 39 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 Gene3D Cytochrome P450 33 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1460 518 PANTHER CYTOCHROME P450 71B11-RELATED 12 506 - -
Mtr3g1460 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1460 Mtr-Chr3 26147371 26149507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1460 14 501 Cytochrome P450 AT3G26310 41.010 4.19e-132 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1460 - - mtr:MTR_3g058060 1034.25