Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1457 ATGGATCTTCAAATCATATGCTTCACGTCCATTTTCTCCCTTCTCATGTTTGTGTTTATAGCAAACAAAATACTAACCAAGAAATCTGAGTCATCAGCTCAAAATTTGCCACCAGGTCCATTGAAGTTACCTATCATAGGAAACATACACAACCTTATTGGTTCACTTCCTCATCATAGGCTAAGAGATTTATCAACAAAATATGGACCATTAATGCATCTAAAGCTTGGAGAAGTTTCTACTATTGTGGTTTCATCAGCTGAATATGCAAAAGAAGTGATGAAAAACCATGATCTTGTCTTTGCATCAAGGCCTCCAATCCAAGCTTCAAAGATCATGAGTTATGATTCTCTTGGTTTAGCTTTTGCACCTTATGGTGATTATTGGAGAAACCTTAGAAAAATTTGTACACTTGAGCTATTAAGTTCAAAACGTGTCCAATCTTTTCAACCAATTAGAAGTGAAGAGGTAACTAATCTAATCAAGTGGATATCTTCTAAAGAAGGATCACAAATCAATTTTACCAAAGAAGTTTTTTCAACAATTTCTACAATCACTTCAAGGACAGCCTTTGGGAAAAAGTGTAAAGAAAATCAGAAATTCATATCTATTGTAAGGGATGCTATTAAGATTGCTGGTGGTTTTGATTTGGGAGATTTGTACCCTTCTTGTAGATTGCTTCAAAATATATCTGGATTGAAGCCTAAGCTTGAAAAGTTACACAAACAAGCTGATTTGATTATGCAAAATATTATTGATGAACATAGGGAGGTTAATAAATCAAGGGTTAATGAAAATCAGGGTGAAGAAGTGGAGGAAGATCTTGTAGATGTGCTCTTGAAGCAGGACGGTTTGAATGATAATAGTGTCAAGGCTGTGATCTTGGATATGTATGGAGGTGGAAGTGAGACATCAGCTACAACCATAACATGGGCAATGGCAGAGATGATTAAAAATCCCAAAATAATGGAGAAAGTACAAGCTGAAGTAAGAGAGGTATTTGATAAAGAAAGAAACCCTAATGAAAGTGACATGGAGAAATTAACATACTTAAAATATGTTGTGAAAGAGACATTGAGATTGCACCCTCCTGCTGCATTTTTGCTTCCAAGAGAATGTGGACAAGCATGTGAAATAAATGGGTATGATATACCTTTTAAAAGCAAAGTGATAGTGAATGCTTGGGCCATTGGAAGAGATCCAAATCATTGGGATGACCCAGAGAGATTTTATCCTGAAAGGTTTATTGAAAGTTGTGTAGATTATAAGGGAAATAATTTTGAGTTCATTCCATTTGGTGCTGGAAGAAGAATGTGTCCGGGAGTAACATTTGGTTTGGTCAATGTTGAGTACCCACTTGCATTGTTGATGTATCACTTTGATTGGAAACTTCCCAATGAGATGAAAAATGAAGATTTGGACATGAGTGAAACTTTTGGATCAGCGGTTACTCGAAAAGACGATTTATACCTTATTCCAGTCATGTATCATCCTTAG 1497 0.3574 MDLQIICFTSIFSLLMFVFIANKILTKKSESSAQNLPPGPLKLPIIGNIHNLIGSLPHHRLRDLSTKYGPLMHLKLGEVSTIVVSSAEYAKEVMKNHDLVFASRPPIQASKIMSYDSLGLAFAPYGDYWRNLRKICTLELLSSKRVQSFQPIRSEEVTNLIKWISSKEGSQINFTKEVFSTISTITSRTAFGKKCKENQKFISIVRDAIKIAGGFDLGDLYPSCRLLQNISGLKPKLEKLHKQADLIMQNIIDEHREVNKSRVNENQGEEVEEDLVDVLLKQDGLNDNSVKAVILDMYGGGSETSATTITWAMAEMIKNPKIMEKVQAEVREVFDKERNPNESDMEKLTYLKYVVKETLRLHPPAAFLLPRECGQACEINGYDIPFKSKVIVNAWAIGRDPNHWDDPERFYPERFIESCVDYKGNNFEFIPFGAGRRMCPGVTFGLVNVEYPLALLMYHFDWKLPNEMKNEDLDMSETFGSAVTRKDDLYLIPVMYHP* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1457 498 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1457 498 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1457 498 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1457 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Mtr3g1457 498 PANTHER CYTOCHROME P450 71B11-RELATED 8 497 - -
Mtr3g1457 498 PANTHER CYTOCHROME P450 71D9 8 497 - -
Mtr3g1457 498 Gene3D Cytochrome P450 29 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1457 498 Pfam Cytochrome P450 37 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1457 498 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1457 498 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1457 498 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1457 498 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1457 498 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1457 498 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1457 498 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1457 498 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1457 498 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1457 498 SUPERFAMILY Cytochrome P450 37 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1457 Mtr-Chr3 26114856 26117716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1457 11 496 Cytochrome P450 AT3G26300 43.227 2.63e-145 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1457 - K13267 gmx:100813216 748.043