Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1456 ATGGATATTCAAATCCTATACTTCACCTCCATTTTCATTTTCATGTTTATAGTAAACAAAATAGTGACCAAGAAATCCAACTCATCAACTCCAAATTTACCACCAGGTCCATTGAAGTTACCTTTTATAGGAAACATACACAACCTTATTGGTTCACTTCCTCATCATAGGCTAAGAGATTTATCAACAAAATATGGACCTTTAATGCATCTAAAGCTTGGAGAAGTTTCTACTATTGTGGTATCATCAGCAGAATATGCTAAAGAAGTGTTGAAAACACATGATCTTGTCTTTGCATCAAGGCCTCCTATCCAAGCTTCAAAGATAATGAGTTATAATTCTATTGGTTTGTCTTTTTCACCTTATGGTGATTATTGGAGACAACTTAGAAAAATTTGTGCACTAGAACTTTTAAGTTCAAAACGTGTTCAATCTTTTCAACCAATTCGAGCCGAAGAGATGACTAATCTTATCAAATGGATAGCTTCAAAAGAAGGATCAGAAATTAATCTCACCAAAGAAGTTTTTTCAAGAATATTTTTAATCACTTCAAGGGTAGCCTTTGGGAAGGAGTGCAAGGATAACAAGAAATTCATATCATTGGTATGGGAATCCACCAGGAGTGCTGGAGGTTTTAATTTGGGAGATTTGTACCCTTCTTATAAATGGCTTCAAAACCTATCTGGGTTGAAGCCTAAGCTAGAAAAGTTACACAAACAAACCGACGTGATATTGCAAAACATTATTGATGAACATAGGTTGGTTAATAAATCAAGGGCTATTAAAGATCATAGTGAAGAAGATCTTGTAGATGTTCTATTGAAGCAGGATTGTTTAAGTGATAATAGTGTCAAGGCTGTGATCTTGGATATGTATGGAGGTGGAAGTGAGACATCAGCTTCTACCATAATATGGGCAACGGCAGAGATGATTAAAAATCCAAGAATAATGAAAAAGTTACAAGCTGAGGTAAGAGAGGTATTTGAAAAAGAAAGAAAACCCAATGAAAGTGACATGGAGAAATTAAAATATTTAAAGTGTGTTGTGAAAGAGACATTGAGATTACACCCTCCTGGTGCATTTTTATTGCCAAGGGAGTGTGGACAAGCATGTGAAATAAATGGGTATGGTATCCCATTTAAAAGCAAAGTAATAGTGAATGTTTGGGCCATTGGAAGAGATCCAAATAATTGGGATGATCCAGAAAGATTTTATCCTGAAAGGTTCATCGACAATTGTGTAGATTATTACAAAGGTAATAATTTTGAGTTCATTCCGTTTGGCAGTGGCAGAAGAATGTGTCCAGGGGTTACATTTGGATTGGTCAGTGTTGAGTTTTCACTTGCATTGTTGATGTACCACTTTGATTGGAAACTTCCCGGCGCTGTGAAAAAAGAAGATTTAGACATGTGTGAGAGTTTTGGAACGGCTGTTATTAGGAAAAATGATTTGCACCTTATTCCCTACGCATATCATCCATAG 1482 0.357 MDIQILYFTSIFIFMFIVNKIVTKKSNSSTPNLPPGPLKLPFIGNIHNLIGSLPHHRLRDLSTKYGPLMHLKLGEVSTIVVSSAEYAKEVLKTHDLVFASRPPIQASKIMSYNSIGLSFSPYGDYWRQLRKICALELLSSKRVQSFQPIRAEEMTNLIKWIASKEGSEINLTKEVFSRIFLITSRVAFGKECKDNKKFISLVWESTRSAGGFNLGDLYPSYKWLQNLSGLKPKLEKLHKQTDVILQNIIDEHRLVNKSRAIKDHSEEDLVDVLLKQDCLSDNSVKAVILDMYGGGSETSASTIIWATAEMIKNPRIMKKLQAEVREVFEKERKPNESDMEKLKYLKCVVKETLRLHPPGAFLLPRECGQACEINGYGIPFKSKVIVNVWAIGRDPNNWDDPERFYPERFIDNCVDYYKGNNFEFIPFGSGRRMCPGVTFGLVSVEFSLALLMYHFDWKLPGAVKKEDLDMCESFGTAVIRKNDLHLIPYAYHP* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1456 493 Gene3D Cytochrome P450 26 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1456 493 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1456 493 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1456 493 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1456 493 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1456 493 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1456 493 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1456 493 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1456 493 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1456 493 PANTHER CYTOCHROME P450 71B11-RELATED 7 491 - -
Mtr3g1456 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Mtr3g1456 493 Pfam Cytochrome P450 34 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1456 493 PANTHER CYTOCHROME P450 71D9 7 491 - -
Mtr3g1456 493 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1456 493 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1456 493 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1456 493 SUPERFAMILY Cytochrome P450 34 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1456 Mtr-Chr3 26107350 26109892 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1456 6 491 Cytochrome P450 AT3G26300 42.430 4.47e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1456 - K13267 gmx:100813216 717.227