Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1448 ATGTCATTTTTTTTCTCATTCCATTTTCTTGCACACACTGCAACTAGTTTTCTAACTTTTTTCCTGAATGTGAAACCAGTTTTCTTGCATGGTTTTTCTGGTTTCCTCCATCTACTACTGTTAGTGGCATTTTTCATGTCATGGTTGAGGGAAAAACTCACTTTCATTGAATCCAGAGACAGTTGCAAAGAGAGAATCAAAAACACCCTCTTCACAAGGACTGTTTTTTGTTTTCTTAGTATTTCTGTTTTCAATTTTCTTCTCTTTTCGTTTGATTATTTCAGTTGGTACAGAAATGATTTTTCAAAAGAAAAACTCGTGACCCTTTTGGATTTAGCGTTCAAAACAGTTTCTTGGGGGGTTGTTTATGTCTTCCTTGAAAGGAAACTCTTATGTTCATGTGAAACAAGATTTCCAATGCAATTGTTCTTCAAACCTTGGTGTGTCTTTTACCTCTTTGTTTCATGTTATTGCTTTACAGTAGAGATTGTTCTCTATGAAAAGCGAGTTTTATTTCCGATTCAATGCTTGGTTTCTGATGTTTTCTCTGTTTGTGTGGGTTTATTCATTTGTTACCTGTGTTTTCTTATGAAAAATGAGGATGAAATAGAAGATAGCTCTCTTCATGAACCTCTTTTGAATGGTAATAATACAAAAGAAACCAGAGGGTTTGACACCGTTACTCCTTACTCTAATGCTGGAATTTTCAGCATTCTTACATTCTATTGGGTCGGTCCACTAATTTCTGTTGGAAAAAGGAAAACTTTAGACCTTGAAGATGTTCCACACCTCGACAGAAAAGACAGTTTATTTGGAGCTTTTCCATATTTTAAGGATAAGCTTGAGGCATATTGTGGCGACGACATCAACAAAGTGACCACATTTAAGCTAGTGAAGACATTAGCATTCTCAGCGCGGAAAGAGATTCTTTTAACAGCTATTTTGGCATTTGTCAACACATTGGCTTCTTATGTGGGTCCTTATCTTATAGATAATTTTGTTCAATATCTTAATGGACAAAGGAAATTGGAAAATGAAGGACTTATTTTGGTGTCTGCATTTTTTGTAGCAAAGGTTGTGGAGTGTCTAACAAAGAGGCAATGGGTTTTCAGGTTACAGACAATTGGAATAAGAATCCAAGCACTTCTGGTAACAATTATCTATGATAAAACTTTGACACTTTCTTGTCAATCCAAACAAGGCCACACTAGCGGCGAGATAATCAATTTCATGACTGTTGATGCTGAAAGAGTTGGCGATTTCAGTTATCACTTGCATGATCTTTGGTTGGTAGTTTTTCAGGTTTTAGTTGCTATGTTTGTTTTGTATAAAAATCTTGGCATCGCTTCAATTTCCGGTCTTGTTGCAACTATCATTGTAATGTTGGCAAATGTTCCTTTAGTGTCAATCCTAGAGAAGTTTCAAAACAAGTTGATGGCATCAAGAGATAAAAGAATGAAGGCCACATCTGAGATTTTAAGGAACATGAGGATTCTCAAACTTCAAGGATGGGAAATGAAGTTTCTGTCTAAGATAACTGAACTCAGAAAGAGTGAGCAATTTTGGTTAAAGAGATTTTTACACACTATAGCTGTGATCATATTTGTATTTTGGAGTGCACCAGCATTTGTGTCTGTGGTTACTTTTGGTTCTTGTATTGTTATAGGGGTCCCACTTGAATCAGGGAAGATCTTATCTTCACTTGCAACATTTCAGATTCTGCAAGAACCTATTTATAATCTTCCAGACACAATTTCAATGATGTCACAATGTAAGGTTTCTCTTGATAGGATTGCATCTTTTCTTTGTAACGATGAAATGCGATCTGATACTGTTGAGAAGCTTCCAAAGGAAAGTTCTCATATAGCTATTGAAGTAGTTGATGGAAACTTCTCTTGGGATTTATCTTCTCCGAACGCAGTATTGAAAAACATAAATCTTAAAGTTTTTCATGGAATGAAAGTTGCTATTTGTGGTACAGTTGGATCGGGAAAATCTACGTTACTTTCATGTGTATTAGGAGAAGTACCAAAGATATCAGGGATTTTAAAAGTGTGTGGTACAAAGGCTTATGTAGCACAGTCGCCATGGATACAAAGTAGCAAGATAGAAAATAACATATTGTTTGGGAAGGATATGGAAAGGCAAAGATATGAGAAGGTTCTTGAAGCATGTTCACTAAAGAAGGATCTCGAGATTTTATCATTTGGCGATCAAACAATTATAGGGGAGAGGGGAATAAATTTGAGCGGCGGACAGAAACAAAGAGTACAAATTGCTCGTGCTTTATATCAAGATGCTGATATATATCTATTTGATGATCCGTTTAGTGCTCTTGATGCTCATACAGGATCTCATCTATTTAAGGAATGCTTGCTGAAACTTTTAAGTTCAAAGACAGTGATCTATGTCACACATCAAGTAGAGTTCTTACCTGCTGCTGACCTTATCTTGGTTATGAAAGATGGAGAAATTACTCAGTGTGGAAAGTATAATGATCTACTCAACTCAGGCACGGATTTTATGGAACTTATCGGTGCTCATAGAGAAGCATTGTCTGCACTTGATTCATCGGATGGAGAAGGTACAGTGTCTCATAAGATAAGTACATCACAACAGGATCTCTGTGTCTCTCTTCCTCTCGGTGTTGACAAAATAGAAGAGAAGAAAGAAGTACAGAATGGTGGAACAAATGACGAGTTTGAGCCAAAAGGACAACTTGTTCAAGAAGAAGAAAGAGAGCAAGGTAAAGTTGGGTTTTCGGTGTACTGGAAATATATAACGACGGCATATGGAGGTGCTCTTGTGCCGCTCGTATTGATAGCTGAAATCATGTTTCAACTTCTTCAAATTGGAAGCAACTATTGGATGGCTTCTTCAACTCCCATCTCAAAAGATATGGAGCCACCTGTTGGAGGAACTACACTCCTAGTTGTCTATGTATGTTTGGCCATAGGAAGTTCTTTATGTGTCCTATCTAGAGCAACACTTGTTGTCACCGCTGGTTATAAAACAGCTACTCTACTCTTCAACAAAATGCATCTCTGCATTTTTCGCGCTCCAATGTCTTTTTTTGATGCCACTCCAAGTGGAAGAATCCTTAATAGGGCTTCTACTGACCAAAGTGAAGTGGATACAAGTATTCCTTTTCAAACTGCATTATGTGCTTGCTCCATAATCCATCTCGTTGGAATTATAATGGTGATGTCTCAGGTTGCATGGCAGGTTTTCATTGTCTTTATTCCTATGACAGCAATCAGCATTTGGTATCAGAAATATTATATACCATCAGGCCGTGAACTATCTCGTTTAGTCGGAGTATCCAAAGCTCCTGTCATTCAACACTTTGCCGAAACAATTTCAGGTACATCAACCATCAGGAGCTTTGATCAGGTGTCAAGATTCCAGCAAACAAATATGAATTTGATGGATGGATATTCACGCCCCAAGTTCAATATTGCCGGGGCTATGGAATGGTTGTCTTTTCGCTTAGATATGTTGTCTTCCATTACATTTGCCTTTTGCTTGTTATTCTTGATATCAGTTCCACAAGGAGTCATAAATTCGGGTGTTGCTGGTTTAGCTGTGACATATGGCCTTAATCTGAACATTATACAAGCATGGATGATATGGGAACTTAGCAACTTAGAGACCAAAATTATATCAGTAGAAAGAATTCTTCAGTATACTTCTATTCCTAGCGAGCCTCCTCTCGTTGTAAAGGAAAACCGGCCACATGATTCTTGGCCATCATATGGAACGGTTGATATACACAACTTGCAGGTGCGTTACACTCCACATATGCCACTTGTGTTGCATGGCCTTACATGCACATTTGTTGGAGGAATGAAAACTGGAATTGTTGGAAGAACAGGAAGTGGTAAATCGACTCTCATACAAGCACTTTTCCGAATCGTTGAGCCTACTTTTGGAAGAATTATGATTGACAACATTAACATATCTTCCATTGGACTTCATGATTTGAGGTCAAGATTGAGCATTATTCCTCAGGATCCAACTATGTTTGAAGGTACTGTAAGGAGTAATTTGGATCCACTGGAAGAGTACAGAGATGAACAAATTTGGGAGGCACTAGACAAGTGTCAACTTGGAGATGAAGTTCGAAGGAAAGAAGGAAAGTTAGAGTCGGCAGTGAGTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTCTGTCTTGGTAGAGTGTTGCTTAAGAAAAATAAAGTCTTGGTTCTAGATGAAGCCACTGCATCAGTTGACACGGCTACCGATAATTTGATACAGCAAACTCTTCGACAACATTTCACTGATTGCACAGTCATTACAATTGCACATCGAAAAACTTCTGTTATTGACAGTGATATGGTTCTACTACTTAATGAAGGACTGATTGAGGAATATGATTCCCCAACAAGATTGCTAGAGAACAAGTTATCATCTTTTTCTCAACTTGTTGCTGAGTATACCACAAGGTCGAACTCCAGTTTTCATCCACAAAAATAA 4512 0.3781 MSFFFSFHFLAHTATSFLTFFLNVKPVFLHGFSGFLHLLLLVAFFMSWLREKLTFIESRDSCKERIKNTLFTRTVFCFLSISVFNFLLFSFDYFSWYRNDFSKEKLVTLLDLAFKTVSWGVVYVFLERKLLCSCETRFPMQLFFKPWCVFYLFVSCYCFTVEIVLYEKRVLFPIQCLVSDVFSVCVGLFICYLCFLMKNEDEIEDSSLHEPLLNGNNTKETRGFDTVTPYSNAGIFSILTFYWVGPLISVGKRKTLDLEDVPHLDRKDSLFGAFPYFKDKLEAYCGDDINKVTTFKLVKTLAFSARKEILLTAILAFVNTLASYVGPYLIDNFVQYLNGQRKLENEGLILVSAFFVAKVVECLTKRQWVFRLQTIGIRIQALLVTIIYDKTLTLSCQSKQGHTSGEIINFMTVDAERVGDFSYHLHDLWLVVFQVLVAMFVLYKNLGIASISGLVATIIVMLANVPLVSILEKFQNKLMASRDKRMKATSEILRNMRILKLQGWEMKFLSKITELRKSEQFWLKRFLHTIAVIIFVFWSAPAFVSVVTFGSCIVIGVPLESGKILSSLATFQILQEPIYNLPDTISMMSQCKVSLDRIASFLCNDEMRSDTVEKLPKESSHIAIEVVDGNFSWDLSSPNAVLKNINLKVFHGMKVAICGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVAQSPWIQSSKIENNILFGKDMERQRYEKVLEACSLKKDLEILSFGDQTIIGERGINLSGGQKQRVQIARALYQDADIYLFDDPFSALDAHTGSHLFKECLLKLLSSKTVIYVTHQVEFLPAADLILVMKDGEITQCGKYNDLLNSGTDFMELIGAHREALSALDSSDGEGTVSHKISTSQQDLCVSLPLGVDKIEEKKEVQNGGTNDEFEPKGQLVQEEEREQGKVGFSVYWKYITTAYGGALVPLVLIAEIMFQLLQIGSNYWMASSTPISKDMEPPVGGTTLLVVYVCLAIGSSLCVLSRATLVVTAGYKTATLLFNKMHLCIFRAPMSFFDATPSGRILNRASTDQSEVDTSIPFQTALCACSIIHLVGIIMVMSQVAWQVFIVFIPMTAISIWYQKYYIPSGRELSRLVGVSKAPVIQHFAETISGTSTIRSFDQVSRFQQTNMNLMDGYSRPKFNIAGAMEWLSFRLDMLSSITFAFCLLFLISVPQGVINSGVAGLAVTYGLNLNIIQAWMIWELSNLETKIISVERILQYTSIPSEPPLVVKENRPHDSWPSYGTVDIHNLQVRYTPHMPLVLHGLTCTFVGGMKTGIVGRTGSGKSTLIQALFRIVEPTFGRIMIDNINISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYRDEQIWEALDKCQLGDEVRRKEGKLESAVSENGENWSMGQRQLVCLGRVLLKKNKVLVLDEATASVDTATDNLIQQTLRQHFTDCTVITIAHRKTSVIDSDMVLLLNEGLIEEYDSPTRLLENKLSSFSQLVAEYTTRSNSSFHPQK* 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1448 1503 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 92 1503 - -
Mtr3g1448 1503 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524
Mtr3g1448 1503 CDD ABCC_MRP_domain2 1253 1473 - -
Mtr3g1448 1503 Pfam ABC transporter 1272 1420 IPR003439 GO:0005524
Mtr3g1448 1503 Pfam ABC transporter 642 776 IPR003439 GO:0005524
Mtr3g1448 1503 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 938 1218 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g1448 1503 Pfam ABC transporter transmembrane region 310 577 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g1448 1503 Pfam ABC transporter transmembrane region 940 1181 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g1448 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 846 IPR027417 -
Mtr3g1448 1503 SMART AAA_5 651 824 IPR003593 -
Mtr3g1448 1503 SMART AAA_5 1281 1464 IPR003593 -
Mtr3g1448 1503 Gene3D ABC transporter type 1, transmembrane domain 900 1236 IPR036640 GO:0005524|GO:0016021
Mtr3g1448 1503 Gene3D ABC transporter type 1, transmembrane domain 288 607 IPR036640 GO:0005524|GO:0016021
Mtr3g1448 1503 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 624 847 IPR003439 GO:0005524
Mtr3g1448 1503 CDD ABCC_MRP_domain1 624 824 - -
Mtr3g1448 1503 CDD ABC_6TM_ABCC_D1 311 598 IPR044746 GO:0140359
Mtr3g1448 1503 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1257 1489 IPR003439 GO:0005524
Mtr3g1448 1503 SUPERFAMILY ABC transporter transmembrane region 938 1237 IPR036640 GO:0005524|GO:0016021
Mtr3g1448 1503 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 310 590 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g1448 1503 Gene3D - 1238 1491 IPR027417 -
Mtr3g1448 1503 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 92 1503 - -
Mtr3g1448 1503 SUPERFAMILY ABC transporter transmembrane region 302 602 IPR036640 GO:0005524|GO:0016021
Mtr3g1448 1503 CDD ABC_6TM_ABCC_D2 936 1230 IPR044726 GO:0140359
Mtr3g1448 1503 Coils Coil 471 491 - -
Mtr3g1448 1503 Gene3D - 619 852 IPR027417 -
Mtr3g1448 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1246 1480 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1448 Mtr-Chr3 25914849 25922008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1448 624 870 Calmodulin-binding Proteins AT2G36910 29.478 2.47e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1448 - K05666 gmx:100775358 2286.15