Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1446 ATGACCAAACTTGCCTCTCTTGAAGAGTCCCTTTTGAATGGTGAAGGTACTGTAAGCAACAACAATTTTGATTCCAAAAAGACACTAAGAAATGAAATTTCAACCAGTTATTTGAATGCTGGATTTTTCAGCATTGTTACATTCTCATGGATGACTCCACTAATAACTTTAGGAAGTAAAAAGACTTTAGACCATGAAGACCTTCCACTGCTTTCTACCAATGACAGTGCCAATGGAACTTTTTCAACTTTTAAAAACGAGCTTGACTTGAAGTGTGGTAATGTTAGGAATGTGACCACTATTAACCTCGCCAAGGTCTTGTTCTTCTCTACATGGCAAGGGATTTTTCTATCTGGCTTTTTTGCATTGGTGTACACATGTGCTACTTATGTAGGACCCTACCTCATAGACAATCTTGTTCAATACCTAAATGATGAAAACAAAGCTAAAAGTGAAGGCTATATTTTGGCTATGATGTTTGTTGCGGCAAAGCTTGTCGAGTGTTTTTCGCAGAGGCACTGGATGTTTAAGTTCCAACAGGTTGGTGTTAGGATGCAATCAATGTTGGTATCAATGATCTATGCTAAAGGTTTGACCCTTTCGTGTCAATCAAAAACGAAAGAGGGACACAGCAGCGGCGAAATCATTAACTTAATGACTGTTGATGCTGAAAGGATAGGTGAATTTTGTTGGTACATGCATGATCCATGGACGGCTGTTCTGCAAGTTGCTTTGGCTTTGTTTATTTTACATAGAAGTGTAGGGGTTGCTTCAGTAGCTGCTTTTGCCGCCACCGTAGTTGTGATGTTGCTAAACCATCCTTTGGCATCACTGCAAGAGAAGTTTCAAGCGAAGTTAATGGAGTTCAAAGATAAAAGAATGAAGGCGACGTCTGAGATTCTAATGAACATGAGGATTCTTAAACTTCAAGCATGGGAGATGAAATTCTTATCGAAAATTATTCATATTAGGAAGTTAGAGGAGACATGGCTAAAGAAATTTCTTGGTAGTACAGCAATTATTAGATTTCTGTTCTTTAATGCCCCAATGTTTGTTGCTGTGGTTACTTTTGGTGCTTGTGTTCTTATAGGCATTCCGCTTGAATCAGGAAAGATTTTATCTGCTCTTGCAACATTCAGAATTCTTCAAACTCCTATCCATAGTCTTCCTGATACAATTTCAATGATTGCACAAACCAAGGTTTCTCTAGATAGGATTGTCGCATTTCTTCGTTTGGATGATTTGCAGACAGATGTAGTGGAGAAGCTTCCGCGAGGTAGTTCGGATATAGCGATTGAAATTGTAGAGGGAAATTTCTCTTGGGATTTTTCTTCTGTCATTATAACATTGAAAAACATAAATCTAAGAGTTTTTAATGGCATGAGGGTTGCTGTTTGTGGTACAGTTGGATCAGGCAAGTCGAGTTTAATTTCTTGTATAATTGGGGAAATACCGAAGATATCTGGGAACTTGAAGGTTTGTGGAACAAAGGCTTATGTTGCTCAATCACCGTGGATACAGAGTGGCAAGATAGAAGATAATATACTATTTGGTAGAGAGATGGATAGGGAAAAGTATGAGAAGGTTCTAGAAGCATGTTCATTGAAGAAAGACCTCGAGGTTTTACCATTTGGTGATCAGACCATTATTGGAGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTACAAATCGCTCGTGCTCTTTACCAAGATGCTGATATATATCTGCTCGACGATCCCTTTAGTGCAGTTGATGCTCATACAGGATCCCATCTCTTTAAGGAGTGTTTGCTTGGCCTTTTGAAAACAAAAACAGTGATCTATATAACACATCAAGTAGAGTTTTTACCTGATGCTGATCTGATACTTGTCATGAAAGAAGGAAGGATAACACAATCAGGAAAATTCAATGACATTCTTACATCGGGAACAGACTTTATGGAACTTGTAGGCGCACATAGAGCAGCATTGTCTTCAGTTAAGTCCTTAGAGAGAAGGAATACATTTAAAAAATCGAGTATTATGGAGGAAGACACAGTTTTATTAAGTGATTCTGAACTTGAGCAAGAAGTGGAAAATATAGATGATCAAAAAGGAAAATTACACGGCACATCTGACGGAAAAGGACAACTTGTTCAAGACGAAGAACGAGAAAAGGGCAGAGTTGGGTTTAAAGTGTTCTTGAAATACATCACAACAGCTTATGGAGGAGCTCTTGTACCTTTTTTATTGCTTTCACAGATACTCACTGTGGGTTTACAGATTGCAAGCAATTTTTGGATGGTTTTGGCAACTCCTGTTTCGGCAACTGCAGAACCTGATATTGGAAGCCTTACTCTTATGGCTGTCTATGTTTCTTTGGCAATTGGAAGTTCGTTTGCCACCCTTGCCAGATCAGTTCTTGCTGTCATAGCTGGATACAAGACCTCCACAATGCTCTTCAATCAAATGCATTTGAGCTTTATTCGAGCACCAATGTCGTTTTTCGATGCCACACCAAGTGGAAGAATTCTTAACAGAGCTTCGACAGACCAAAGTGCAGTAGATATGAGCATTCCAAATGTAGCATGGGGACTTACCTTCAATGTTGTTAAGGTCTTGGGAACTGTTGCTGTGATGTCTCAAGTTGCGTGGCAGGTCTTTATAGTATTGATTCCTGTCATGGCAACTTGCATATGGTACCAGCGATACTACTCTGCATCAGCACGTGAATTGGCACGATTAACTGGTATATGCCAAGCTCCAGTTATACAACATTTTTCTGAAACGATTTCTGGATCAACTACCATAAGAAGTTTTGAGCAAGAATCAAGATTTCATGAAATGAATATGCAGTTGATAGACAAATATTCGCAACCTAAATTATACAGTGCCAGTGCAATGGAATGGCTGACATTCAGATTGGATCTTTTATCCTCAATAGTATTTGCTTTCTGTTTGGTTTTCTTGGTATCTTTTCCAAGTTCAATAGCTGATCCTAGTATTGCGGGATTGGCTGTGACATATGGGATTAACCTAAATGCTGTACAAAATAATTTTATTTGGTTTGTTTGCAATTTGGAGAACAAAATTATATCTGTAGAAAGAATACTTCAGTACACCTCCATCCCAAGTGAGGCACCACTTATGATAAAAGACAACCAACCCGATCATTCTTGGCCATCATTCGGAGAGGTTCATATTCAGGATTTACAGGTTCATTATGCTCCTCACTTGCCTCTTGTTTTACGTGGACTTACTTGCACTTTTACTGCTGGAGCGAAAACTGGGATCGTGGGAAGAACAGGAAGTGGAAAATCAACACTGGTGCAAGCACTTTTCAGACTTGTTGAACCTGTTGCAGGACAAATATTGATAGATAACATCAACACCTCATTGATTGGACTTCATGATTTGCGATCCAGACTTAGCATAATTCCTCAAGATCCAACGATGTTTGAAGGGACTGTAAGAAGTAACCTTGACCCGCTTGAAGAGTACGCAGATGAACAGATTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGAAGTGAGGAAGAAAGAAGGAAAGCTTGATTCCACAGTTACTGAGAATGGAGAAAATTGGAGCATGGGGCAAAGACAGTTGGTCTGCCTCGGACGTGTTCTACTTAAGAAAAGCAAGATCTTGGTGCTCGATGAAGCAACTGCATCAGTTGATACGGCAACAGATAATATTATTCAGCAAACAGTTAAGCAACATTTCTCAGATTGCACAGTCATTACCATTGCTCATAGAATCACTTCAATCCTTGACAGCGACATGGTTCTGTTTCTCAGTGAAGGGCTCATTGAGGAATATGATTCACCAAAGAAGTTGCTTAAGGACAAATCTTCATCTCTTGCTCATCTAGTTGCAGAATACACAAGGAGATCAAACACTGGTTTTGGAAGTTAA 3927 0.3934 MTKLASLEESLLNGEGTVSNNNFDSKKTLRNEISTSYLNAGFFSIVTFSWMTPLITLGSKKTLDHEDLPLLSTNDSANGTFSTFKNELDLKCGNVRNVTTINLAKVLFFSTWQGIFLSGFFALVYTCATYVGPYLIDNLVQYLNDENKAKSEGYILAMMFVAAKLVECFSQRHWMFKFQQVGVRMQSMLVSMIYAKGLTLSCQSKTKEGHSSGEIINLMTVDAERIGEFCWYMHDPWTAVLQVALALFILHRSVGVASVAAFAATVVVMLLNHPLASLQEKFQAKLMEFKDKRMKATSEILMNMRILKLQAWEMKFLSKIIHIRKLEETWLKKFLGSTAIIRFLFFNAPMFVAVVTFGACVLIGIPLESGKILSALATFRILQTPIHSLPDTISMIAQTKVSLDRIVAFLRLDDLQTDVVEKLPRGSSDIAIEIVEGNFSWDFSSVIITLKNINLRVFNGMRVAVCGTVGSGKSSLISCIIGEIPKISGNLKVCGTKAYVAQSPWIQSGKIEDNILFGREMDREKYEKVLEACSLKKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLGLLKTKTVIYITHQVEFLPDADLILVMKEGRITQSGKFNDILTSGTDFMELVGAHRAALSSVKSLERRNTFKKSSIMEEDTVLLSDSELEQEVENIDDQKGKLHGTSDGKGQLVQDEEREKGRVGFKVFLKYITTAYGGALVPFLLLSQILTVGLQIASNFWMVLATPVSATAEPDIGSLTLMAVYVSLAIGSSFATLARSVLAVIAGYKTSTMLFNQMHLSFIRAPMSFFDATPSGRILNRASTDQSAVDMSIPNVAWGLTFNVVKVLGTVAVMSQVAWQVFIVLIPVMATCIWYQRYYSASARELARLTGICQAPVIQHFSETISGSTTIRSFEQESRFHEMNMQLIDKYSQPKLYSASAMEWLTFRLDLLSSIVFAFCLVFLVSFPSSIADPSIAGLAVTYGINLNAVQNNFIWFVCNLENKIISVERILQYTSIPSEAPLMIKDNQPDHSWPSFGEVHIQDLQVHYAPHLPLVLRGLTCTFTAGAKTGIVGRTGSGKSTLVQALFRLVEPVAGQILIDNINTSLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYADEQIWEALDMCQLGDEVRKKEGKLDSTVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTVKQHFSDCTVITIAHRITSILDSDMVLFLSEGLIEEYDSPKKLLKDKSSSLAHLVAEYTRRSNTGFGS* 1309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1446 1308 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 116 398 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g1446 1308 Pfam ABC transporter transmembrane region 115 385 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g1446 1308 Pfam ABC transporter transmembrane region 746 988 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g1446 1308 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 745 1025 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g1446 1308 CDD ABCC_MRP_domain2 1060 1280 - -
Mtr3g1446 1308 SMART AAA_5 459 632 IPR003593 -
Mtr3g1446 1308 SMART AAA_5 1088 1280 IPR003593 -
Mtr3g1446 1308 SUPERFAMILY ABC transporter transmembrane region 744 1044 IPR036640 GO:0005524|GO:0016021
Mtr3g1446 1308 CDD ABCC_MRP_domain1 432 632 - -
Mtr3g1446 1308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 432 654 IPR027417 -
Mtr3g1446 1308 CDD ABC_6TM_ABCC_D2 743 1037 IPR044726 GO:0140359
Mtr3g1446 1308 Pfam ABC transporter 450 584 IPR003439 GO:0005524
Mtr3g1446 1308 Pfam ABC transporter 1080 1227 IPR003439 GO:0005524
Mtr3g1446 1308 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 5 1307 - -
Mtr3g1446 1308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1053 1287 IPR027417 -
Mtr3g1446 1308 Gene3D - 414 678 IPR027417 -
Mtr3g1446 1308 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1062 1296 IPR003439 GO:0005524
Mtr3g1446 1308 ProSitePatterns ABC transporters family signature. 557 571 IPR017871 GO:0005524
Mtr3g1446 1308 Gene3D - 1045 1297 IPR027417 -
Mtr3g1446 1308 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 432 655 IPR003439 GO:0005524
Mtr3g1446 1308 CDD ABC_6TM_ABCC_D1 117 406 IPR044746 GO:0140359
Mtr3g1446 1308 Gene3D ABC transporter type 1, transmembrane domain 707 1043 IPR036640 GO:0005524|GO:0016021
Mtr3g1446 1308 MobiDBLite consensus disorder prediction 697 717 - -
Mtr3g1446 1308 Gene3D ABC transporter type 1, transmembrane domain 89 413 IPR036640 GO:0005524|GO:0016021
Mtr3g1446 1308 SUPERFAMILY ABC transporter transmembrane region 112 410 IPR036640 GO:0005524|GO:0016021
Mtr3g1446 1308 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 5 1307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1446 Mtr-Chr3 25892587 25900325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1446 432 676 Calmodulin-binding Proteins AT2G36910 29.502 5.64e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1446 - K05666 gmx:106794105 2045.78