Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1444 ATGGCAGAAATAGCGGTGTCTTTTGCTATTGACCAATTGCTTCCACTGTTAACAGGAGAAATCAATCTGCTCAAAGGTGTTCACAAGAAATTTTCAGATATTAAAGATGAACTGGAGAGTATCCGAGCCTTCCTTAAGGACGCTGACAGAAGAGCTACAGCTGAGGGAGACGGCACAAGTGAAGGAGCCAAAATGTGGGTGAAGCAGGTTAGGGAAATAGCTTTTCGCATAGAAGATGTCATTGATGATTATATGATCCATGTGGGGCAGCAACCTCGTGATTCCCGATGCGTTTCTCTACTCCATGATATTCCTCACTTGCTCAAAACTATGAATTCTCGCCGTCAAATAGCGTTCAAGATTCAAGAGATTAAGTCATTTGTTTGTGGGATCAAAGAAAGAAGTGAAAGATATGGTTTCCAAATCCAACCTTCTTCTCAACAAGGATCTACAAGCTTTAGAGGAAGCCAAACTGCCAAATGGCATGACCCTCGAATGGCTGCTTTATACATTGATGAAGCGGAAATTATAGGCTTTCAAGCACCCAAAAAAAGATTAGTAGATTGGTTGGTAAAGGGAAGATCAGAGCGCACTGTCATATCTGTCGTGGGAATGGGAGGGCAAGGAAAAACTACTCTTGCTAAAAAAGTTTTTGACAGCAAAGAGGTTGTTGGACACTTTGAATGTCGTGTTTGGATCACAGTGTCACAATCTTACAATATAGAAGTGTTGTTGAGACGCATGTTGAAGGAGCTTTACAAACAAAAAGGAGACAATCCTCCTCAAGATATCACTGAAATGGATCGAGGCGCATTGATTTCTGAGCTGAGAAAATACTTGCAGAAAAAGAGGTATGTTTTTGTGTTTGATGATGTATGGAACAAAAGTTTTTGGGATGAGATTGAATATGCTGTTGGTGATCATAAAAATGGGAGTAAGATATTTATTACAACAAGAAATATGGATGTTGCGGTGTATTGTAAGAAATCTTCTTTTATTGAAGTGCATGAACTACATCCTTTAACAGTAGAACAATCTTTTGAGTTGTTTAATAAGAAGGCCTTTCAATTTGACTTTAATGGATGTTGTCCAAAAGAGCTCATTGATATATCTTCCGAAATTGCTAGAAAATGCAAAGGTTTACCGCTGGCAATTGTGGCTATTGGCGGCCTTTTATCTACAAAGGAGAAAAATGCATTTGAATGGCAAAGATTTAATGAAAATATAACTTTAGAGTTAAATAATGATTCCCATTTAACCGGGATAAAAAAAATACTTGGTTTCAGCTACGATGATTTGCCTTTTTATCTTAAGTCATGTTTGTTGTATTTTGGAATATATCCAGAAGATTATGAAGTTGAATCAAAGAGAGTGATACGGCAATGGATAGCTGAAGGTTTTGTGAAAGAAGAAAGGGGGAAAACTTTGGAAGAAGTTGCAGAAGGATATTTAACAGAGTTGATTCGCCGATGTTTGGTACAAGTATCCTCAGTTAGAATTGACGGAAAAACTAAAAGTTGTTGTGTCCATGATTTAATACATATGATGATCCTTGAAAAGTGTGAGGATTTAAGTTTCTGCAAGCATATTAGTGCAGATGGCCATTCATCTATAAGTGGAATTATTCGACGCCTATCAATATCAGCTAATTCCAATGATTTAGCAACATGTATTGAAAACTCATATGTTCGGTCACTATTTCTTTTCACAAATAAATCAAATTTTTTAGATGAAAACATTATAAGTAGAATCTTGACAAAACACAGGCCACTGAAGGTGCTTGATTTTCAAGATGCCATATTACTTATTGATTATAAAAATTTGGGAAGTCTGGTCCACTTAAAATATTTAAGCTTCAGGAATTCTACTAAGAATTGTGGTTGGCTTCTAGCTAGTGTTATGGAGATTCAGATTTCTCCAAGTGGACTTATGCCTCAACTTGCTCTTAAAAAGTATTCCTTTCACGGTATAAGGTCATATAAACATAAGTCTCAAGGAATATGTACATTTTTCATATCAAATAAACACAAATCAGAAATGGCAGAAATGGCAGTGTCTTTTGCGGTTGACCAACTACTTCATTTGTTAAGGGAAGAAGCTGGTCTGTTGAAAGGCATTCACAACGAATTTGCAAACATTAAAGATGAACTGGAGATCATCCAAGCCTCCCTTAAGGATGCTGATAGAAGAGCTGCCGCTGAAGAAGACAGCAATAATGAAGGAGTCAAATCGTGGGTGAAGCAACTTAGAGAAGCAGCTTTCCGCATAGAAGATATCATTGATGATTATATGATCTATATGGAACAGCAGCCTCGTGATCTCGGATGTCTAGCTTTACTCCATAAGATTGCTTACTTACTCAAAACAATGAAAGATCGCCATCAAATTGCATCCGAGATTCAAGACATTAAGTTATTTATTCGTGGAATCAAGGAAAAAAGCCACAGATATGAGTTCCAAATCTTGCCTTCTAATGAACAAGAATCAAGAAGCTTCAGAAAAAGCCAAAATGTTAAATGGCATGACCCTCGAACGGCTGCTTTATACATTGGTGAAGCAGAAATGGTAGGCCTTCAAGCACCAAGAAAACAAATGATTGGTTGGTTGGTAGAGGGAAGATCAGAGCGCACTGTCATCTCTGTGGTAGGTATGGGAGGGCTAGGAAAAACCACTCTTGCCAGAAAAGTGTTTGACAGCAAAGAGGTAGCGGGACACTTTGAATTTCGTGTATGGATCAAAGTGTTGCAATCATACTATACAGAAGGGTTGCTGAGAGGCATGTTGAATGAGCTTTACAAACAAAAAGGAGAAGAGCCTCCTAAAGGTATCTCGAAAATGGATGGGTCGTTGATTTCTGAGCTGAGAAACTACTTGCAACAAAAGAGGTATGTTTTCGTTTGGGATGAGATTGAAAATGCATTGATTGATAATAAAAATGGGAGTAAGATATTTATTACAACAAGAAATATGGATGTTGCCATATATTGTAAGAAATCTTCTTTCATTGAAGTGTATGAATTGCAACCTTTAACAAATGAACAATCTTTTGAGTTGTTCAACAAGAAGACATTTCAGTTTGACAACAATGGATGTTGTCCAAAAGAACTCATTGATATATCTTTTGAAATTTCTAGAAAATGCAAGGGTTTACCGCTGGCAATTGTTGCCATTGGTGGTCTATTGTCTACAAAAGAGAAAAATGTATTTGAGTGGCAGAAATTTTGTAAAAATATGACTTTAGAGCTAAAGAAAGATTCTCTTTTGGCCGGGATAAGCAAAATTTTAGGATTCAGCTACAATGATTTGCCTTTCTATCTTAAACCATGTTTCTTATATTTTGGAATGTATCCCGAAGATTATGAAGTTGGATCGAGGAGACTGTTTCGACAGTGGGTAGCTGAAGGATTTGTGAAAGAAGAAAGGGGGTATACCTTGGAAGAAGTTGCAGAACGATATTTAACTGAGTTGATCCATAGAAGTTTGGTTCAAGTATCTTCAGTTAGAATTGATGGAAAAACTAAAAGTTGCTGTGTTCATGATCTGATACATATGATGATCCTTGAAAAGAGTGAGGATATAAGTTTCTGCAAGCATATTAGTGAAGATGATCTTTCATCTTTATTTGAAATCATTCGACGCCATTCATTAACAACCTATTCCAAAGATTTTCCGGCATGTAGTGAAAATTCACATGTTCGGTCACTATTTCTTTTCAAGAATGGATCACAACAAATGGAGGACGACCACTTCATGAGGAGAATCTTAACAGAATACAGACGGTTGAAGGTGCTTAATATTGAAGGTGCTATGTTTCTTAATCTTAATGGGAATATGGGAAGTTTGATCCACCTGAAGTATTTAAGCTTCTATGGTTCTTATATTGAAGTAGCATACCCTGAAATTCTGGAATCGATTGGCATGCTCCAAAACATGGAGACCCTGGATCTAAGGGTTAGTTCTTATTTCCATAAGCTGCCAAAGGAGATTAGCAATTTTAGAAAGCTACGACATCTTCTGGGAAGAGGTATGTCTTTGTTACAGTTGAAGGGCGGTATCGGAGGCATGAAATATTTAGAAACATTGAGTAAAGTGCGGATAGATGAGGATGGAATAGAGTTATTGAGAGAGCTCGAAAATCTGAAGAAGTTAAGGAAATTGGGTTTGGATAATATTCAGAGAGAGCATGGGAGCGCGTTATCTTCCTTATTGAAGGAGTTGCGGCACTTGGAGAAACTACACATCGTGGCAAAAAGTTACAGATATTTTTTAAATGAGGTTATTGATATCCATTTGGAATCACCCCCGCCAGTGCTTCAAAATCTAAAACTGAATGGAGTGTTGAATAAGTTCCCAAGGTGGATTCTTCGGCTTCAAAATCTTCTTAAGTTGAAGTTAGTAGGCTCCAGGTTAACTGATAATCCAATAGAACATTTAGATAAAATGTCAAACTTATTGTCTCTCTCAATCATTAACAAAGCTTATAAAGGTGAAATTTTACATTTTCATGATGGAGGGTTTCAAAATCTAAAGGAACTATACATTACAGACTTGCCTGACTTGAATTCGATCGTCATTGATGAAGGAGCATTACCTTCTCTAAAAAAGTTCCAGTTATCTCGTATCCCCAACCTTGAGACGGTTCCTGCTGGCATCCGGTACTTAAAAAAGCTTGAAGTTCTCAATGTTTTTGGAGTGCCCCATGTAGAAATGTATCCTAAACTTTAA 4725 0.3708 MAEIAVSFAIDQLLPLLTGEINLLKGVHKKFSDIKDELESIRAFLKDADRRATAEGDGTSEGAKMWVKQVREIAFRIEDVIDDYMIHVGQQPRDSRCVSLLHDIPHLLKTMNSRRQIAFKIQEIKSFVCGIKERSERYGFQIQPSSQQGSTSFRGSQTAKWHDPRMAALYIDEAEIIGFQAPKKRLVDWLVKGRSERTVISVVGMGGQGKTTLAKKVFDSKEVVGHFECRVWITVSQSYNIEVLLRRMLKELYKQKGDNPPQDITEMDRGALISELRKYLQKKRYVFVFDDVWNKSFWDEIEYAVGDHKNGSKIFITTRNMDVAVYCKKSSFIEVHELHPLTVEQSFELFNKKAFQFDFNGCCPKELIDISSEIARKCKGLPLAIVAIGGLLSTKEKNAFEWQRFNENITLELNNDSHLTGIKKILGFSYDDLPFYLKSCLLYFGIYPEDYEVESKRVIRQWIAEGFVKEERGKTLEEVAEGYLTELIRRCLVQVSSVRIDGKTKSCCVHDLIHMMILEKCEDLSFCKHISADGHSSISGIIRRLSISANSNDLATCIENSYVRSLFLFTNKSNFLDENIISRILTKHRPLKVLDFQDAILLIDYKNLGSLVHLKYLSFRNSTKNCGWLLASVMEIQISPSGLMPQLALKKYSFHGIRSYKHKSQGICTFFISNKHKSEMAEMAVSFAVDQLLHLLREEAGLLKGIHNEFANIKDELEIIQASLKDADRRAAAEEDSNNEGVKSWVKQLREAAFRIEDIIDDYMIYMEQQPRDLGCLALLHKIAYLLKTMKDRHQIASEIQDIKLFIRGIKEKSHRYEFQILPSNEQESRSFRKSQNVKWHDPRTAALYIGEAEMVGLQAPRKQMIGWLVEGRSERTVISVVGMGGLGKTTLARKVFDSKEVAGHFEFRVWIKVLQSYYTEGLLRGMLNELYKQKGEEPPKGISKMDGSLISELRNYLQQKRYVFVWDEIENALIDNKNGSKIFITTRNMDVAIYCKKSSFIEVYELQPLTNEQSFELFNKKTFQFDNNGCCPKELIDISFEISRKCKGLPLAIVAIGGLLSTKEKNVFEWQKFCKNMTLELKKDSLLAGISKILGFSYNDLPFYLKPCFLYFGMYPEDYEVGSRRLFRQWVAEGFVKEERGYTLEEVAERYLTELIHRSLVQVSSVRIDGKTKSCCVHDLIHMMILEKSEDISFCKHISEDDLSSLFEIIRRHSLTTYSKDFPACSENSHVRSLFLFKNGSQQMEDDHFMRRILTEYRRLKVLNIEGAMFLNLNGNMGSLIHLKYLSFYGSYIEVAYPEILESIGMLQNMETLDLRVSSYFHKLPKEISNFRKLRHLLGRGMSLLQLKGGIGGMKYLETLSKVRIDEDGIELLRELENLKKLRKLGLDNIQREHGSALSSLLKELRHLEKLHIVAKSYRYFLNEVIDIHLESPPPVLQNLKLNGVLNKFPRWILRLQNLLKLKLVGSRLTDNPIEHLDKMSNLLSLSIINKAYKGEILHFHDGGFQNLKELYITDLPDLNSIVIDEGALPSLKKFQLSRIPNLETVPAGIRYLKKLEVLNVFGVPHVEMYPKL* 1575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1444 1574 Gene3D - 166 335 IPR027417 -
Mtr3g1444 1574 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 444 IPR027417 -
Mtr3g1444 1574 CDD RX-CC_like 681 812 IPR038005 -
Mtr3g1444 1574 Gene3D - 4 118 - -
Mtr3g1444 1574 Gene3D - 683 797 - -
Mtr3g1444 1574 PANTHER DISEASE RESISTANCE PROTEIN RP 702 1561 IPR044974 GO:0006952
Mtr3g1444 1574 PANTHER DISEASE RESISTANCE PROTEIN RP 26 623 IPR044974 GO:0006952
Mtr3g1444 1574 Gene3D - 341 429 IPR042197 -
Mtr3g1444 1574 Gene3D - 1009 1098 IPR042197 -
Mtr3g1444 1574 Gene3D Ribonuclease Inhibitor 1219 1569 IPR032675 -
Mtr3g1444 1574 CDD RX-CC_like 2 133 IPR038005 -
Mtr3g1444 1574 Pfam NB-ARC domain 181 432 IPR002182 GO:0043531
Mtr3g1444 1574 Pfam NB-ARC domain 863 1100 IPR002182 GO:0043531
Mtr3g1444 1574 PRINTS Disease resistance protein signature 957 971 - -
Mtr3g1444 1574 PRINTS Disease resistance protein signature 878 893 - -
Mtr3g1444 1574 PRINTS Disease resistance protein signature 1047 1061 - -
Mtr3g1444 1574 PRINTS Disease resistance protein signature 1306 1322 - -
Mtr3g1444 1574 Pfam Rx N-terminal domain 684 771 IPR041118 -
Mtr3g1444 1574 Pfam Rx N-terminal domain 5 95 IPR041118 -
Mtr3g1444 1574 Gene3D - 843 1004 IPR027417 -
Mtr3g1444 1574 PANTHER - 26 623 - -
Mtr3g1444 1574 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 841 1113 IPR027417 -
Mtr3g1444 1574 SUPERFAMILY L domain-like 1178 1568 - -
Mtr3g1444 1574 PANTHER - 702 1561 - -
Mtr3g1444 1574 Gene3D - 430 521 IPR036388 -
Mtr3g1444 1574 Gene3D - 1099 1190 IPR036388 -
Mtr3g1444 1574 Coils Coil 710 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1444 Mtr-Chr3 25864244 25876595 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1444 200 397 WRKY Transcription Factor Family AT5G45050 25.253 3.21e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1444 K13457 - gmx:100819372 849.351