Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1443 ATGTGTGACTGTAAAGATGCACTTGCCTGCGCTCGTGATCATTTGCTTCCACTAGCCCGTGATCATTTGCTTCCATTCTTGAAGGAAGCATTCAACATGATTAGGGGTGTCCCAAAAGAAATTGCAGAATTGAAAGATGAACTTGAAAGAATTGAAGTCTTCATCAACGATGCGGATAGAAGGGCTGATGATGTAGAAGACAAGAAAATCAAAGACATGATCAAGCAGCTGATAGAAGCATCTTTTCACATGGAAGATGTCATTGATGATTATATCTTTCTTGAGGAACAACATGCTCCTGATCCTGGTTGTGCTGCTGTTGCTACAAACTGTGTCAAAACTATGGCTTTCCGTCTCCAAATAGCTTACAAGATTCAGAACATCAAATCCCGAATAAGTGAAATAAATGATACAAGAACTGAAAAAGATCATGGCTTCTATATCCAATCTTCATCGGATAAAGCATCAACTAGTTCTGCAACAAACAGAAACGCCTCACTATTTCAGAACCTTCGAGACGCTCCACTTTACATGGTTGAAGCTGATGTTGTAGGATTTGATAAGCCAAGAGACGAATTGATTGATCTTTTGGTAGCGGGAAGAGCAGACCGGACAATTGTCTCCATCTTTGGAATGGGAGGACAAGGAAAAACCACTCTAGCGAAGAAAGTTTTTGACAACCCAAAGGTCGTAAAATACTTTGATTGTCGTGTATGGATTACGGTGTCTCGACCATACAATACAGAAAAAGTGTTGCGAGACATTATGCTCGAGTTTTACAAACAACAAGGGGAAGTTCCTCCTGAGAGTCTCCATCAAATGGATCGAAAGTCATTAGTTGATGAAGTGAGAAACCACTTTCAAGGAAAAAGTTGTAGGATATTAATCACAACAAGAAAAAAGGATGTTGCAAATGCTTGTAATAAATCTTTTGGTAAAGTGCATAATCTGGAACGTTTATCTGAAAAACAATCTTTGGAATTGTTTCTAAAGAAGGCGCTCCATGGCTTGGACGGCATTTTTCCTGAATATCTTATTGATATATCTTCCAAAATTGTCGAAAAATGCAAAGGATTACCTCTAGCAATTGTAGTCATTGGTGATATTCTATCTCGCACGGATAGAAATTCAATAGAATGGTCGAAGTTTAGTGAAAATATAAATGCAGAGTTAGAGGAATATTCCATGATAAGAAAAATTTTAGGACTTAGTTACCATGATTTGCCATGCTACCTCAAGTCATGTTTCTTGTATTTTGGATTATATCCTGAAGACTATATAGTTCGTTCAAAAACATTGACTCGCCAATGGATTGCTGAAGGGTTCGTGAAAGAAGACAGGGGAAGGACATTTGAAGAGGTTGCAGAAGGATATTTAGTAGAGTTGATCCATAGAAGTTTGGTGCAAGTAGTTTCAACTAGTATTGATGGAAGAGTAAAAAGTTGCCGCGTTCATGATCTAGTGCATGAAATGATCCTTGACAAATTTAAGGATTTAAGTTTTTGCAAGAATATTTTTAAGGGCAAAAATTGGTCTGCTGGAATGATTCGACGTCTATCAATAGCATCCAATTCTGATAATCTAAGGGAAGATATTGAAAGCTCAAGTATTCGATCATTGCTTATTCTCGAACCTCAAACATCAGTTGAATCCTTTGTGAGTAGAATCCCTAGAGCATATAGGCGGTTGAAGGTGCTTGCTTTGATTCATATGGAATTGCTTAATATTCCTAATGATTTTGGTAGCTTGAACCACTTGAAATATTTTGCATCCGCGGTGATTAAAATTAGAAGTTCTAGACTTCCAAAATCCATTGGCATGCTCGTGAACCTAGAGACTTTGGATTTAAAATCTCCAAATATTCAAAATCGTACTGTGCTGAATCAAATGAATTTAAGAGATGTAGGCTTTGAATATTGTAATATGCCCAAGGAGATTTGCAAGCTTAAAAAGCTACGCCATTTTATAGGCTATCAAATGTCTCTGATTCAGTTGAAGGATGGTATTGGAGGCATGACATCCCTACAAACTCTAAATGAGGTTTATTTAGACGATGATGAAGATGAAGATGATAATAGAGTGGTAGAGTTAATAGAAGAGCTAGGAAAGCTAAAGCAGCTTAGGGAATTAAGCTTGGTCGGTGTTAGGAGTAAATATATGAGTGCTATATCTTCCTCAATCAACAAGATGCAACAATTGGAGAAACTAAATATTAGAGGAATCAGATATAACACATTCATTGATATGGATTTGAATTCACCCCCACCAAAGCTTCAACGTGTTAAACTTATAGGGTATTTATTGAAATTGCCTGAGTGGATTTCAAAACTCCAATATCTCGTTAAGTTGAAGGTGACGATTACGAAGGAAGGGAATGATGCAATGAAATTACTCAAAAGTATGCCAAACTTGTTGTCCCTTGAAATCTCCGGTGATTTTAGTGTTGAAAACACATTGGAGAGGTTACATTTTGAAGATGGATGGTTTATGAATTTGAAGAACCTGGCTATTTTTGATTTCTTTAAGTTGAGTCACATCCTTATTGACGAAGGTGCATTGGGTTCTCTGAGAAAGCTCACTTTGAAAGCCATCCCCGAACTGATGATGTTACCAACTGGCATTCAACACTTACACAAGCTTGAAGTTCTCTGTCTTCATTTGATGAGTTATGAACTTAAACAGAGCATTGCTCCTAATGAAGGAAAAGAGCATTGGATATTCAAGCAAGTGCCCTTTGTAGAAATAATATTTTGA 2754 0.3715 MCDCKDALACARDHLLPLARDHLLPFLKEAFNMIRGVPKEIAELKDELERIEVFINDADRRADDVEDKKIKDMIKQLIEASFHMEDVIDDYIFLEEQHAPDPGCAAVATNCVKTMAFRLQIAYKIQNIKSRISEINDTRTEKDHGFYIQSSSDKASTSSATNRNASLFQNLRDAPLYMVEADVVGFDKPRDELIDLLVAGRADRTIVSIFGMGGQGKTTLAKKVFDNPKVVKYFDCRVWITVSRPYNTEKVLRDIMLEFYKQQGEVPPESLHQMDRKSLVDEVRNHFQGKSCRILITTRKKDVANACNKSFGKVHNLERLSEKQSLELFLKKALHGLDGIFPEYLIDISSKIVEKCKGLPLAIVVIGDILSRTDRNSIEWSKFSENINAELEEYSMIRKILGLSYHDLPCYLKSCFLYFGLYPEDYIVRSKTLTRQWIAEGFVKEDRGRTFEEVAEGYLVELIHRSLVQVVSTSIDGRVKSCRVHDLVHEMILDKFKDLSFCKNIFKGKNWSAGMIRRLSIASNSDNLREDIESSSIRSLLILEPQTSVESFVSRIPRAYRRLKVLALIHMELLNIPNDFGSLNHLKYFASAVIKIRSSRLPKSIGMLVNLETLDLKSPNIQNRTVLNQMNLRDVGFEYCNMPKEICKLKKLRHFIGYQMSLIQLKDGIGGMTSLQTLNEVYLDDDEDEDDNRVVELIEELGKLKQLRELSLVGVRSKYMSAISSSINKMQQLEKLNIRGIRYNTFIDMDLNSPPPKLQRVKLIGYLLKLPEWISKLQYLVKLKVTITKEGNDAMKLLKSMPNLLSLEISGDFSVENTLERLHFEDGWFMNLKNLAIFDFFKLSHILIDEGALGSLRKLTLKAIPELMMLPTGIQHLHKLEVLCLHLMSYELKQSIAPNEGKEHWIFKQVPFVEIIF* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1443 917 Gene3D - 18 125 - -
Mtr3g1443 917 Coils Coil 41 61 - -
Mtr3g1443 917 CDD RX-CC_like 21 135 IPR038005 -
Mtr3g1443 917 Gene3D - 319 404 IPR042197 -
Mtr3g1443 917 Pfam NB-ARC domain 190 406 IPR002182 GO:0043531
Mtr3g1443 917 Gene3D Ribonuclease Inhibitor 519 679 IPR032675 -
Mtr3g1443 917 Gene3D Ribonuclease Inhibitor 688 898 IPR032675 -
Mtr3g1443 917 PANTHER DISEASE RESISTANCE PROTEIN RP 42 888 IPR044974 GO:0006952
Mtr3g1443 917 PRINTS Disease resistance protein signature 206 221 - -
Mtr3g1443 917 PRINTS Disease resistance protein signature 356 370 - -
Mtr3g1443 917 PRINTS Disease resistance protein signature 606 622 - -
Mtr3g1443 917 Gene3D - 405 495 IPR036388 -
Mtr3g1443 917 SUPERFAMILY L domain-like 483 886 - -
Mtr3g1443 917 Pfam Rx N-terminal domain 22 99 IPR041118 -
Mtr3g1443 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 419 IPR027417 -
Mtr3g1443 917 PANTHER - 42 888 - -
Mtr3g1443 917 Gene3D - 176 315 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1443 Mtr-Chr3 25822367 25825860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1443 203 367 WRKY Transcription Factor Family AT5G45050 29.570 5.57e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1443 K13457 - gmx:100819372 707.983