Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1438 ATGGAAGGGGGTGAAAATAGTAAAACTGACAACCTTAATTGGGAAGTTATACTAAGAAATTATGAGAATGTTATAGCTTCAGGAACCAAATCTATGAAAATTAAAGCAATGTTCATGCTGGCCAAATACTCGAACAAAGCCCCGGAACATGTATTATCTACCACCATTCCAATTCTCACTGAGATTCTTTCTCATAATAACATTGCAAATAATTCTGCTCCTGGTTCACTTCAAGAAGCTGCTGCTTATTGCTTGAAGTGTATTGCTTGCAGAGGTGATGGTAGTTTGGCAATTGAAATGGGCGAACATGGTGTTGCGCGTTCTTTGATAAAGTTGTTACCTCGTGCCGAGGGAAAGATGCAAAAAGTGTTGATAGAATGTTTGTTGGTTGTTTTAAGTTTTTGTGATAATAGTAGGACATTTGTTGCAGCTAATGGTGGTTTAGAGATTATTATTAGTTTGTTGAGTACTTGTAGCGATGATGTTAGATTGTATTTGTTAGAGATTTTGAGTGCGTTGGCGCTTCGGATGGAGGTTCGGAAGGAACTCGTTAGATTAGGAGCACTTCGTTTTATTGTTGAGGCTGCTGGTGTTGGTAACATGATTTCGAGGGAAAGGGCATGTCAATCGATTGGATTGGTTGGTCTTTCAAGGCAAGTTAAGCTTATGCTTTTTGAATTGGGAGTGATACCCGTGCTTGTGGATTTGTTTCGTGATGGAGATAACACTACAAAACTTGTGGCCGGTAATACTCTTGGTGTGCTATTGAACCATGTTGATTACATCAGACCAATTGCTCAAGCTGGGGCTATACCTCTTTATGCGGAGCTTCTTCGAGGAGATGATGTTTCTGGTAAGGAGATAGCTGAGGATGTGTTTTGTATATTGGCTGTTGCAGAGGCGAATGCTGTTGAAATTGTGGGTCACTTGGTGAGACTTCTTAGAGAAGGTGATGACGAAACTAAAGCAGCAGCTGTCAATGTGATATGGGATCTGTTGCGATACAAGCACACACCTTCTGTGTTCCGGAATTCAGGTGCGGCTTTTATCCTTGTTGAGTTGTTGAGCCATGGGACTGAAGAAATAAAGAAAAAGATTTCTGGGGCTTTTTCTCAGATGAGCTACCAGGAATGTGGTAGAATGGTCCTTGGTGATGCAGGAGCAATTCCGCTTCTTATTGATTTACTACACGACGAGACTGGGGAACTAAGGGATAATGTGGTTGAGGCTCTTTCTAATTTTCATGAGGATCCACTGTATCATGATACATTATCGGATGTAGTTAATGCTCCTTCATTCAGAATTTTGCAGAATAGACTAACTCCTCTTCGAGCAACGAGCGAGCATATAACTAGATCGTTACGTAGAACGGGTATCGAGTAG 1383 0.4107 MEGGENSKTDNLNWEVILRNYENVIASGTKSMKIKAMFMLAKYSNKAPEHVLSTTIPILTEILSHNNIANNSAPGSLQEAAAYCLKCIACRGDGSLAIEMGEHGVARSLIKLLPRAEGKMQKVLIECLLVVLSFCDNSRTFVAANGGLEIIISLLSTCSDDVRLYLLEILSALALRMEVRKELVRLGALRFIVEAAGVGNMISRERACQSIGLVGLSRQVKLMLFELGVIPVLVDLFRDGDNTTKLVAGNTLGVLLNHVDYIRPIAQAGAIPLYAELLRGDDVSGKEIAEDVFCILAVAEANAVEIVGHLVRLLREGDDETKAAAVNVIWDLLRYKHTPSVFRNSGAAFILVELLSHGTEEIKKKISGAFSQMSYQECGRMVLGDAGAIPLLIDLLHDETGELRDNVVEALSNFHEDPLYHDTLSDVVNAPSFRILQNRLTPLRATSEHITRSLRRTGIE* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1438 460 Gene3D - 199 438 IPR011989 -
Mtr3g1438 460 Gene3D - 22 198 IPR011989 -
Mtr3g1438 460 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 10-LIKE 3 457 - -
Mtr3g1438 460 SUPERFAMILY ARM repeat 18 416 IPR016024 -
Mtr3g1438 460 SMART arm_5 217 257 IPR000225 GO:0005515
Mtr3g1438 460 SMART arm_5 335 375 IPR000225 GO:0005515
Mtr3g1438 460 SMART arm_5 258 298 IPR000225 GO:0005515
Mtr3g1438 460 SMART arm_5 299 334 IPR000225 GO:0005515
Mtr3g1438 460 SMART arm_5 376 416 IPR000225 GO:0005515
Mtr3g1438 460 SMART arm_5 135 175 IPR000225 GO:0005515
Mtr3g1438 460 PANTHER U BOX DOMAIN-CONTAINING 3 457 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1438 265 418 U-box Gene Family AT2G23140 29.630 3.10e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1438 - - cam:101502901 622.854