Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1436 ATGTGTGATTTTTTGGGAGCAGCCAAAATGATTAGGGGTGTCCCAAAAGAAATTTCAGACATGAAAGAAGAACTTGAAAGCATTGAAAACTTCATCAACAATGCAGATAGAATAGCTGATGCTGAAGATGACAATGCAAGTGAAGGAATCAAAGCAAGGATCAAGCAGCTCATAGAAGCATCTTTTGGCATTCAAGATGTCATTGATGAATATATGATTTGTCAGGAACAACCTTCTGGATTTGCTAACTTTGTCAAAACTATAATTCTTCGTCGCCAAATAGCATACAAGATTCAGAAAATCAAATCCCAAATTAGTGAAATGAATGATACAAGTGGAAAAGAACATAGCTTGCATATCCAATCATCTTTGGAACAAGGGTCAAGCAGTACTGCAACAAACTTCAACATGGAGAACCTTCGAAAGGCTCAATTTTGTATCGATGAAGATGATGTTGTAGGCTTTGAAGTTCCAAGAGACATACTAATTGATTGGTTGATAGAGGAGAGAGAAGTGCACACAATTGTCACCATTGTTGGAAAGGGAGGACAAGGAAAAACAACTCTTGCAAAGAAGGTTTTTGACGACAACAAGATCGTTAAACACTTTGATTGTCATGTATGGATCAGAGTGTCTCAATCATACAATATAGAAGGCTTGCTGAGGGACATGCTGCACAAGTTTTACGAACAACAAGGAGCAAATCTCCCCCAAAGTATTCATCAAATGAATCGAGAGTCATTGGTTGATGAAGTGAGGAACTACTTGCAGGAAAAAAGGTATGTTATAGTTTTTGATGATGTATGGAGCTTACATTTTTGGGATGATATCAAATTTGCTATGATTGATAATAAAAAGGGTTGTAAGATATTAATCACAACAAGAAACATGGATGTTGCAAATGCATGTAAGAAATCTTCTTTTGTTGAAGTGTATGAAATGAAAGGTTTGGCTGAACAACAATCTTTGGAGTTGTTCAATAAGAAGACATTCCACGACTTAAACGGACGTTGTCCAGAAAATCTTATTGATATATCTTTTAAAATTGTTGAAAAATGCAATGGATTGCCACTAGCAATTGTACTCATTGGTGGTATTTTATCTTGCAAAGATAGAAATACATCAGAATGGTATAAGTTTAGTGAAAATCTAAATATAGAGTTAAAAGAAGATTTGAAGATAAAAAAAATTGTAGGTCTCGGTTACCATGATCTGTCTTACAATCTCAAGTCATGTTTGTTGTATTTTGGATTATATCCTGAAGGTTGTATAGTTCCTACAAATATACTGATTCGGCAATGGATGGCTGAAGGATTTGTGAAAGATGATATGGTAAAAACATTGGAAGATGTTGCAGATGGATATTTAACAGATTTGATCAGTAGAGGTTTGGTGCAAGTAGTTTCAATTAGTATTGATGGAAGAGCAAAAAGTTGTTGTGTTCATGATCTGGTGCATGCATTGATCCTTGAAAAATGTGAAGAATTAAGTTTTTGCAAGAATATTAGCGAGGATGACCAATCATCTTTAAGTGGGATGGTTCGACGCCTATCAATAGCAATCAGATTTGACAATTTGATGGAAAATATTGAAAACTCACAGGTTCGATCACTGCTTGTTAAAACATTAAATGAATCCCTTGCAAGAAGAATCCCTACAAAATACAGGCGATTAAACGTGCTTGATTTAGAGCATGTTGGATTGCTTGATGTTCCTAAAGATTTTGGAAGTTTGACCCACCTAAAGTATTTTAGGTTTAGAGAGAACTTTCGAGGAGATCGTTGTGTACTTCCAAAAGCCATTGGTATGCTCAAGAACCTTGAGACATTGGATTTAACACGTACAAGTTTCCAAGCCATGCCGAAAGAGATATGCAAGCTTAGAAAGTTACGCCATTTCCTAGGCTACAATATGTCTTTGATTCAATTAAAAGATGGTATCGGAGGCATGACATCCCTACAAACTCTACGTGATGTTTATTTAGATGGCGGCGAAAATGAAGTGGTAAAGCTAATCCAAGAGCTAGGAAAACTAAAGCACCTAAGGGAATTGGTCTTGATCGGTGTTAGGAGCGGATACATGAGTGCTATATCTTCCTCAATCAATGAGATGCAAAAAGTGGAGAAACTACAAATTCGCGCAAACGGATATGACACAGTTATTGACATGCATTTGAATTCACCACCACCTATGCTTCGACATCTTACTCTTGATGGGAAGTTAGAGATGTTGCCTCTGTGGATTCCAAAACTTCAAAATCTTGTTAAGCTGAAACTCAAGTATTCCCAACTAACAGATGATAAAATGAAATTACTCAAAAGTATGCCAAACTTGTTGACCCTCTCTCTTAGCAACAATGCTTATGAAGCTGAAAGGTTACATTTTCAAGATGGATGGTTTGAGAATTTGAAGCAACTATATCTTGAAGATTTGGAAAACTTGAATTACATCATTATCGACGAAGGAGCGTTGCGTTCTCTAAAAAAGCTATCACTAACCTTCCTCCGCCATCTCAAGACTTTACCAACTGGCATTCAACACTTGAAAAAGCTTGAAGTTCTCAGTATTAAGCAAATGAGCCATTTATTTAGTCAAGCATTTTTTTTCGATGAAGGAAAAGTGCATTGGAGCTTCAAGCATGTGCCCGTGGTAGAAATCATTCACCATCCAATTAATTAA 2679 0.3628 MCDFLGAAKMIRGVPKEISDMKEELESIENFINNADRIADAEDDNASEGIKARIKQLIEASFGIQDVIDEYMICQEQPSGFANFVKTIILRRQIAYKIQKIKSQISEMNDTSGKEHSLHIQSSLEQGSSSTATNFNMENLRKAQFCIDEDDVVGFEVPRDILIDWLIEEREVHTIVTIVGKGGQGKTTLAKKVFDDNKIVKHFDCHVWIRVSQSYNIEGLLRDMLHKFYEQQGANLPQSIHQMNRESLVDEVRNYLQEKRYVIVFDDVWSLHFWDDIKFAMIDNKKGCKILITTRNMDVANACKKSSFVEVYEMKGLAEQQSLELFNKKTFHDLNGRCPENLIDISFKIVEKCNGLPLAIVLIGGILSCKDRNTSEWYKFSENLNIELKEDLKIKKIVGLGYHDLSYNLKSCLLYFGLYPEGCIVPTNILIRQWMAEGFVKDDMVKTLEDVADGYLTDLISRGLVQVVSISIDGRAKSCCVHDLVHALILEKCEELSFCKNISEDDQSSLSGMVRRLSIAIRFDNLMENIENSQVRSLLVKTLNESLARRIPTKYRRLNVLDLEHVGLLDVPKDFGSLTHLKYFRFRENFRGDRCVLPKAIGMLKNLETLDLTRTSFQAMPKEICKLRKLRHFLGYNMSLIQLKDGIGGMTSLQTLRDVYLDGGENEVVKLIQELGKLKHLRELVLIGVRSGYMSAISSSINEMQKVEKLQIRANGYDTVIDMHLNSPPPMLRHLTLDGKLEMLPLWIPKLQNLVKLKLKYSQLTDDKMKLLKSMPNLLTLSLSNNAYEAERLHFQDGWFENLKQLYLEDLENLNYIIIDEGALRSLKKLSLTFLRHLKTLPTGIQHLKKLEVLSIKQMSHLFSQAFFFDEGKVHWSFKHVPVVEIIHHPIN* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1436 892 Gene3D Ribonuclease Inhibitor 660 867 IPR032675 -
Mtr3g1436 892 Gene3D - 130 311 IPR027417 -
Mtr3g1436 892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 416 IPR027417 -
Mtr3g1436 892 Gene3D Ribonuclease Inhibitor 516 659 IPR032675 -
Mtr3g1436 892 PANTHER - 19 858 - -
Mtr3g1436 892 PRINTS Disease resistance protein signature 175 190 - -
Mtr3g1436 892 PRINTS Disease resistance protein signature 255 269 - -
Mtr3g1436 892 PRINTS Disease resistance protein signature 353 367 - -
Mtr3g1436 892 PRINTS Disease resistance protein signature 602 618 - -
Mtr3g1436 892 CDD RX-CC_like 8 108 IPR038005 -
Mtr3g1436 892 Pfam Rx N-terminal domain 8 79 IPR041118 -
Mtr3g1436 892 PANTHER DISEASE RESISTANCE PROTEIN RP 19 858 IPR044974 GO:0006952
Mtr3g1436 892 SUPERFAMILY L domain-like 482 863 - -
Mtr3g1436 892 Gene3D - 316 402 IPR042197 -
Mtr3g1436 892 Gene3D - 403 493 IPR036388 -
Mtr3g1436 892 Gene3D - 5 110 - -
Mtr3g1436 892 Pfam NB-ARC domain 161 390 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1436 Mtr-Chr3 25696363 25699372 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1436 176 372 WRKY Transcription Factor Family AT5G45050 31.343 2.09e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1436 K13457 - gmx:100819372 796.193