Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1435 ATGTGTGAGACTGCACTTTCCTTGCTTCCACTAGCCCGTGATCATTTGCTTCCGCTCTTCAAGGAAGCATTCAACATGATTAGGGGTAACCCGAAAGAAATTGTAGAATTGAAAGATGAACTAGAAAGCATTGAAGACTTCATCAACGATGCGGATAGAAGAGCTGATGATGTAGAAGACAAGAAAATCAAAGACATGATCAAGCAGCTGATAGAAGCATCTTATCACATAGAAGATGTGGTTGATGATTATATCTTACTTGAGGAACAACAATCTTCTGATCCTGGATGTGCTGCTGGTGCTGTTGACTTGGTGAAAACTAAGATCCTTCGTCTCCAAATAACTTACAAGATTCAGAACATCAAGTCCCGAATCAGAGAAATAAAAGAAACAAGTGCAAAAGATCATGGCTTCAACATCCAATCTTCTTCAGATAAACCATCAAGCAGTTCTGCAACAAACAGAAACGCCTCATTTTTGCAGAACCTTCGAGACGCTCCATTTTATATGGATGAAGCTGATCTTGTGGGATTTGAAGAGCCACGAGACAAATTGATTGATTTGTTGGTAGAGGGAAGAGCAGAGCGCACCGTTGTCTCCATAGTTGGAATGGGAGGACTGGGAAAAACCACTATAGCCAAGAAAGTTTTTGACAACCAAAAGGTCGTTAAACATTTTGATTGTCATGTATGGATCACGGTGTCTCGACCATACAATATAGAAAAATTGTTGAGGGAAATTTTGCTCGATATTTACAAACAACAAGGGGAAGATCCTCCTCAGAGTCTCCATCAGATGGATCGAAAGCCATTAGTTGATGAAGTGAGAAACTACTTGCAAGGAAAAAGGTATGTTATAGTGTTTGATGATGTATGGGATTCACATTTTTGGTATGATATTGAATTTGCTATGATTGATAACAAAAATGGTTGTAAGATATTAATCACAACGAGAAACAAGGTTGTTGCAGATGCTTGTAAGAAATCTTTTGGTAAAGTGCATGAGCTGGAACGTTTATCTGAAGAACAGTCCTTGGAATTGTTTAAAAAGAAGGCGTTCCATGACTTGGACGGAGTTTGTCCAGAAAATCTTTTTGACATATCTTCCAAAATTGTTGAAAACTGCAAAGGATTACCTCTAGCAATTGTTGTCACCGGTGATATTTTATCTCGCAAAAATAGAAATCCAATTGAATGGTCTAAATTTAGTGAAAATATAAATGTAGAGTTAGAGGGATATTCCACAATAAGAAAAATTTTAGGATTTAGTTACCATAATTTACCTTACAACCTCAAGTCATGTTTCTTGTATTTTGGATTATATCCTGAAGACTATATAGTTCATTCAAAGACGTTGACTCGCCAATGGATTGCTGAAGGGTTTGTGAAGGAAGACAGGGGGAGGACATTGGAAGAGGTTGCTGAAGGATATTTAATAGAGTTGATCCATAGAAGTTTGGTGCAAGTAGTTTCAATAAGTATTGATGGAAGAGTAAAAAGTTGTCGTGTTCATGATCTAGTGCATGCAATGATCCTTGATAAATATGAGGATTTAAGTTTTTGCAAGAATATTACTGAGGACAAACAATTGTCTTTAACTGGAATGATTCGACGCCTATCAATAGAAACTACCTCTGATAATTTAATGAAAGTTATTGAAAACTCACATGTTCGATCACTGCTTATTTTCACACCAAAGACATCACTTAAATCCTTTGTAAGGACGATCCCTACAAAATATAGGCGGTTGAAGGTGCTTGCTTTGATGCATAAGGAATTAGCTGAAATTCCTAATGATTTGGGAAGTTTGAACCACTTGAAATATCTTGAGTTCGGGATGATTGGAGGAAGATATTCTGGACTTCCAAAATCCATTGGCATGATCGCAAACTTAGAGACTTTGGATTTAAGATATAGCAATTATGAAATTCGTGATATGCCAAAGGAGATTTGCAAGCTTAGAAAGCTACGCCATTTATTAGGCGATTGTATGTCTTTGATTCAGTTGAAGGATGGTATTGGAGGCATGACATCTCTACAAACTCTAAGTGAAGTTTATTTAGATGAGAATGAAGATGAAAATGATAATAGAGTAGTAGAGCTAATTCAAGAGCTAGGAAAGCTAAATAAGATAAGAAAATTGAGCTTGATAGGTGTTAGGAGTAAATATATGAGTGCTATATCTTCCTCAATCAATCAAATGCAACAAATGGAGAAACTACTTATCGGAGGAATCTCATTCATTGGTCTGGATTTGAATTCACCCCCACCTAGGCTTCAACGTGTTAAACTTGACTGGCATTTAAGAAAGTTACCTGAGTGGATTTCAAAACTCAAAAATCTTGTTGAGCTCAAGGTGACAGTTAGGAAGGAAGGGAATGATGCAATGAAATTACTCCAAAGTATGCCAAACTTGTTGCTCCTCTGTTTCACTGGCGATGGTCGCCATTATGAAGACAAATTTGAAAGTATACATTTTCAGGATGGGTGGTTTAAGAATTTGAAGGAACTATATCTTACTAATTTCTATTCCTTGAGTCACATCCTTATAGACGAAGGTGCATTGGGTTCTCTGAAAAAGCTCAACTTATCCTTCAACCCCCAACTCATGACATTACCAACTGGCATTCATCACTTGCACAACCTTGAAGTTCTCTATATGAAAGGAATGAGTGTGGAATTAATGCAGAGTATTGCTCCTGATGACGGAAAAGAGCATCCGATTTTCATGCAAGTTCCCTTTGTAGATATTTCTTGTGAAAAATATTTGATTAAAGCTATCGAATCATTCACATCTGTCTCACTTCGAAAAAGAAACAAAAAAAGGTGA 2829 0.369 MCETALSLLPLARDHLLPLFKEAFNMIRGNPKEIVELKDELESIEDFINDADRRADDVEDKKIKDMIKQLIEASYHIEDVVDDYILLEEQQSSDPGCAAGAVDLVKTKILRLQITYKIQNIKSRIREIKETSAKDHGFNIQSSSDKPSSSSATNRNASFLQNLRDAPFYMDEADLVGFEEPRDKLIDLLVEGRAERTVVSIVGMGGLGKTTIAKKVFDNQKVVKHFDCHVWITVSRPYNIEKLLREILLDIYKQQGEDPPQSLHQMDRKPLVDEVRNYLQGKRYVIVFDDVWDSHFWYDIEFAMIDNKNGCKILITTRNKVVADACKKSFGKVHELERLSEEQSLELFKKKAFHDLDGVCPENLFDISSKIVENCKGLPLAIVVTGDILSRKNRNPIEWSKFSENINVELEGYSTIRKILGFSYHNLPYNLKSCFLYFGLYPEDYIVHSKTLTRQWIAEGFVKEDRGRTLEEVAEGYLIELIHRSLVQVVSISIDGRVKSCRVHDLVHAMILDKYEDLSFCKNITEDKQLSLTGMIRRLSIETTSDNLMKVIENSHVRSLLIFTPKTSLKSFVRTIPTKYRRLKVLALMHKELAEIPNDLGSLNHLKYLEFGMIGGRYSGLPKSIGMIANLETLDLRYSNYEIRDMPKEICKLRKLRHLLGDCMSLIQLKDGIGGMTSLQTLSEVYLDENEDENDNRVVELIQELGKLNKIRKLSLIGVRSKYMSAISSSINQMQQMEKLLIGGISFIGLDLNSPPPRLQRVKLDWHLRKLPEWISKLKNLVELKVTVRKEGNDAMKLLQSMPNLLLLCFTGDGRHYEDKFESIHFQDGWFKNLKELYLTNFYSLSHILIDEGALGSLKKLNLSFNPQLMTLPTGIHHLHNLEVLYMKGMSVELMQSIAPDDGKEHPIFMQVPFVDISCEKYLIKAIESFTSVSLRKRNKKR* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1435 942 PANTHER - 36 891 - -
Mtr3g1435 942 Gene3D - 338 423 IPR042197 -
Mtr3g1435 942 PRINTS Disease resistance protein signature 198 213 - -
Mtr3g1435 942 PRINTS Disease resistance protein signature 278 292 - -
Mtr3g1435 942 PRINTS Disease resistance protein signature 375 389 - -
Mtr3g1435 942 PRINTS Disease resistance protein signature 853 869 - -
Mtr3g1435 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 438 IPR027417 -
Mtr3g1435 942 SUPERFAMILY L domain-like 502 893 - -
Mtr3g1435 942 Pfam Rx N-terminal domain 15 94 IPR041118 -
Mtr3g1435 942 Gene3D - 424 514 IPR036388 -
Mtr3g1435 942 PANTHER DISEASE RESISTANCE PROTEIN RP 36 891 IPR044974 GO:0006952
Mtr3g1435 942 Gene3D - 166 334 IPR027417 -
Mtr3g1435 942 Gene3D Ribonuclease Inhibitor 542 924 IPR032675 -
Mtr3g1435 942 CDD RX-CC_like 14 130 IPR038005 -
Mtr3g1435 942 Coils Coil 34 61 - -
Mtr3g1435 942 Pfam NB-ARC domain 180 425 IPR002182 GO:0043531
Mtr3g1435 942 Gene3D - 11 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1435 Mtr-Chr3 25682471 25686039 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1435 198 396 WRKY Transcription Factor Family AT5G45050 29.851 4.20e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1435 K13457 - gmx:100819372 793.112