Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1425 ATGTGTGACTGTAAAGCTGCACTTGCCTGCGCTCGTGATAACTTGCTTCCACTAGCCCGTGATCATTTGCTTCCACTCTTGAAGGAAGCATTCAACATGATTAGGGGTGTCCCAAAAGAAATTGCAGAATTGAAAGATGAACTTGAAAGCATTGAAGACTTCATCAACGATGCGGATAGAAGATCTGATGATGTAGAAGACAAGAAAATCAAAGACATGACGAAGCAGCTGATAGAAACATCTTTTCACATAGAAGATGTCATTGATGATTATATCTTCCTTGAGGAACATCAATCTTCTGAACCTGGATGTGCTGCTGCTGTTGACTTGCTCAAAACTACAAAACTACGTCTCCAAATTGCTTATAAGATTCAGAACATCAATTCCCAAATTAGGGAAATAAAAGAAACAAGTGAAAAGGATCATGACTTCGACATCCAATCTTCTTTGGATAAAGCATCAAGTAGTTCTGCAACAAACAGAAATGCCTCATTATTTCAGAACCTTCGAGATGCTCCACTTTACATGGATGATGCTGATGCGGTAGGATTTGATGTGTCAAGAGACAAATTGATTGATTTGTTGGTAGAGGGAAGAGCACACCGCACAGTTGTCTCCATTGTTGGAATGGGAGGACTGGGAAAAACCACTCTAGCCAAGAAAGTTTTTGACAACCAAAAGGTCGTTAAACACTTTGATTGTCGTTTATGGATCACGGTTTCTCGACCATATAATAAAGAAAAATTGCTGAAGGACATACTGCAACAAGGGAAATGTCCTCCTCAAAGTCTTCATCAAATGGATGGAAAGTTATTAGTTGATGAAGTGAGAAACTACTTGCAAGGAAAAAGGTACGTTGTAGTGTTTGATGATGTATGGGACTCACATTTTTGGAATGATATTGAATTTTCTATGATTGATAACAAAAATGGTTGTAAGATATTAATCACAACAAGAAACGAGGATGTTGCAGATGCTTGTAAGAAATCTTCTTTTGTTGAAGTGCATAAACTTGAAGGTTTAAGTGAAGAAAAATCTTTAGAATTGTTCAATAAGAAGGCGTTCCATGACTTGAGCGGATATTGTCCAGAAAATCTTATTGATATATCTTCCAAAATTGTTGAAAAATGCAATGGATTACCACTCGCAATTGTAGTCATTGGTGGTATTTTAGCTTGCAAAGATAGGAATCCAATTGAATGGTCTAAGTTTAGTGAAAATATAAATGCAGATCAGTCAAAGGAATATTCCATGATAAAAAAAATTCTAGGACTTAGTTACCATGATTTGCCTTGCAACCTCAAGTCATGTTTCTTGTACTTTGGATTATATCCTGAAGACTCAAATGTTCGTTCAAATATATTGACTCGTCAATGGATTGCTGAAGGGTTTGTGAAAGAAGAAAGGGGAATGACATTGGAAGAGGTTGCAGAAGGACATTTAATAGAGTTGATCCGTAGAAGTTTGGTGCGAGTAGATGGGATCACTATTGATGGAAGAGTAGACAGTTGCCGTGTTCATGATCTAGTGCATGCAATGATCCTTAATAAACATGAGGATTTAAGCTTTTGCAAGAGTATTACCGAGGACAGACAATTGCCTTCAACTGGAATGATTCGACGCCTATCAATAGCATCAAGTTCTGATAATCTAATGGAAGGTATTGAAAGCTCACATGTTCGATCGCTGCTAGTTCTCGAACCTAAAACATTACTTAAATCCTTTGTAAGGACGATCCCTACAAAATATAGGTGGTTGAAGGTGCTTACTTTAAGCTCAAACCAACATGAAATTCCTCATGATTTAGGAAGTTTGAACCACTTGAAATATTTTTGGTTCAGGGGGAATGGAGAAAGAAATTCTGAACTTCCAAAATCCATTGGCATGCTTGTGAACCTAGAGACTTTGGATTTAAGAGAAACAGAGTTTAAAAATCGTAATATGCCGAAGGAGATTTGCAAGCTTAGAAAGCTACGCCATTTTTTAGGCTATCGTATGTCTTTGATTGAGTTGAAGGATGGTATTGGAGGCATGACATCCCTACAAACTCTAAATGAGGTTTATTTATATGATCATGAAGATGAAAATGATAATAGAGTCGTAGAGCTAATTGAAGAGCTAGGAAAACTAAAGCAGCTAAGGGAATTGGGCTTGGCCGGTGTTAGGAGTAAATATATGAGTGCTATATCTTCTTCAATCAATAAGATGCAACAACTGGAGAAACTAAATATTAGTGGAGTCGAATATGAGACATTCATTGATCTGGATTTGAATTCACCCCCACCTATGCTTCAACATATTGGACTCTACGGGAATTTAAAGAAGTTTCCTGAGTGGATTCCAAAACTCACAAACCTTGTTGACATGAAGGTGAGACTTACGAAGGAGGAAGGGAACGATGCAATGAAATTACTCCAAAGTATGCCAAACTTGTTGTCCCTCCATATCTCTGGTGGTAATTATGAAGACAAATTGGAAAGGTTACATTTTCAAGTTGGATTTAAGAATTTAAAGGAACTGTCGATTGATCATTTCAATAACTTGAGTCACATCCTTATTGACGAAGGTGCGTTGAGTTCTCTGAAAAAACTCACTTTATACGGCAACCCCCAACTGACGAGTTTACCAACTGGCATTCAACACTTACAAAAGCTTGAAGTTCTCTGGCTTGCTGATATGAGTGTGGAACTTATACAGAGCATTGCTCCTGATAAAGGAAAAGAGCATTGGATCTTCAAGCAAGTGCCCTTTGTAGAAATTGACTAA 2766 0.3753 MCDCKAALACARDNLLPLARDHLLPLLKEAFNMIRGVPKEIAELKDELESIEDFINDADRRSDDVEDKKIKDMTKQLIETSFHIEDVIDDYIFLEEHQSSEPGCAAAVDLLKTTKLRLQIAYKIQNINSQIREIKETSEKDHDFDIQSSLDKASSSSATNRNASLFQNLRDAPLYMDDADAVGFDVSRDKLIDLLVEGRAHRTVVSIVGMGGLGKTTLAKKVFDNQKVVKHFDCRLWITVSRPYNKEKLLKDILQQGKCPPQSLHQMDGKLLVDEVRNYLQGKRYVVVFDDVWDSHFWNDIEFSMIDNKNGCKILITTRNEDVADACKKSSFVEVHKLEGLSEEKSLELFNKKAFHDLSGYCPENLIDISSKIVEKCNGLPLAIVVIGGILACKDRNPIEWSKFSENINADQSKEYSMIKKILGLSYHDLPCNLKSCFLYFGLYPEDSNVRSNILTRQWIAEGFVKEERGMTLEEVAEGHLIELIRRSLVRVDGITIDGRVDSCRVHDLVHAMILNKHEDLSFCKSITEDRQLPSTGMIRRLSIASSSDNLMEGIESSHVRSLLVLEPKTLLKSFVRTIPTKYRWLKVLTLSSNQHEIPHDLGSLNHLKYFWFRGNGERNSELPKSIGMLVNLETLDLRETEFKNRNMPKEICKLRKLRHFLGYRMSLIELKDGIGGMTSLQTLNEVYLYDHEDENDNRVVELIEELGKLKQLRELGLAGVRSKYMSAISSSINKMQQLEKLNISGVEYETFIDLDLNSPPPMLQHIGLYGNLKKFPEWIPKLTNLVDMKVRLTKEEGNDAMKLLQSMPNLLSLHISGGNYEDKLERLHFQVGFKNLKELSIDHFNNLSHILIDEGALSSLKKLTLYGNPQLTSLPTGIQHLQKLEVLWLADMSVELIQSIAPDKGKEHWIFKQVPFVEID* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1425 921 Coils Coil 41 61 - -
Mtr3g1425 921 Gene3D - 427 518 IPR036388 -
Mtr3g1425 921 Gene3D - 340 426 IPR042197 -
Mtr3g1425 921 Pfam Rx N-terminal domain 22 102 IPR041118 -
Mtr3g1425 921 Pfam NB-ARC domain 189 428 IPR002182 GO:0043531
Mtr3g1425 921 Gene3D Ribonuclease Inhibitor 694 901 IPR032675 -
Mtr3g1425 921 PANTHER - 41 894 - -
Mtr3g1425 921 CDD RX-CC_like 21 136 IPR038005 -
Mtr3g1425 921 Gene3D - 18 121 - -
Mtr3g1425 921 SUPERFAMILY L domain-like 505 897 - -
Mtr3g1425 921 PRINTS Disease resistance protein signature 204 219 - -
Mtr3g1425 921 PRINTS Disease resistance protein signature 279 293 - -
Mtr3g1425 921 PRINTS Disease resistance protein signature 377 391 - -
Mtr3g1425 921 PRINTS Disease resistance protein signature 856 872 - -
Mtr3g1425 921 Gene3D - 175 335 IPR027417 -
Mtr3g1425 921 Gene3D Ribonuclease Inhibitor 569 687 IPR032675 -
Mtr3g1425 921 PANTHER DISEASE RESISTANCE PROTEIN RP 41 894 IPR044974 GO:0006952
Mtr3g1425 921 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 441 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1425 Mtr-Chr3 25577657 25586193 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1425 205 398 WRKY Transcription Factor Family AT5G45050 30.500 9.51e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1425 K13457 - gmx:100819372 771.155