Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1424 ATGTGTGACTGTAAAGATGCACTTGCCTGCGCTCGTGATCATTTGCTTCCACTAGCCCGTGATCATTTGCTTCCATTCTTGAAGGAAGCATTCAACATGATTAGGGGTGTCCCAAAAGAAATTGAAGAATTGCAAGAGGAACTAGAAAGAATAGAAGTCTTCATCAACGATGCGGATAAAAGGGCTGATGATGTAGAAGACAAGAAAATCAAAGACATGATCAAGCAGCTGATAGAAGCATCTTTTCACATAGAAGATGTCATTGATGATTATATCTTTCTTGAGGAACAACATGCTCCTGATCCTGGATGTGCTGCTGGTGTTACAAACTGTGTCAAAACTATGGCTTTCCGTCTCCAAATAGCTTACAAGATTCAGAACATCAAATCCCGAATAAGTGAAATAAATGATACAAGAACTGAAAAAGATCATGGCTTCTATATCCAATCTTCTTCGGATAAAGCATCAACTAGTTATGCAACAAACAGAAACGCCTCATTATTTCAGAACCTTCGAGACGCTCCACTTTACATGGTTGAAGCTGATGTTGTAGGATTTGATAAGACAAGAGACAAATTGATTGATTTTTTGGTAGCAGGAAGAGCAGACCGGACAATTGTCTCCATTGTTGGAATGGGAGGACTGGGAAAAACCACTCTAGCGAAGAAAGTTTTTGACAACCCAAAGGTCGTAAAACACTTTGATCGTCGTGTATGGATTACGGTGTCTCGACCATACAATACAGAAAAAGTGTTGAGGGACATTATGCTCGAGTTTTACAAACAACAAAGGAAAGTTCCTCCTCAGAGTCTCCGTCAAATGGATCGACAGTCATTAGTTGATGAAGTGAGAAACTACTTGCAAGAAAAAAGGTATGTTGTAGTGTTTGATGATGTATGGGAGTCACATTTTTTGCATGATATTGAATTTGCTATGATTGATAACAAAAAGGGTTCTAGGATATTAATCACTACAAGAAACATGGATGTTGCGAATACTTGTAAGAAATCTTCTTTTGTTGAAGTGTATGAACTAAAAGGTTTGACTGTAGAACAATCTTTTGAGTTGTTCAATAAGAAGGCATTCCATGACTTAAATGGACGTTGTCCAGAAAATCTTATTGATATATCTTCCAAAATTGTTAAAAAATGCAAAGGATTACCACTAGCAATTGTAGTCATTGGTGGTATTTTAGCTCCCAAAGATAAAATTCCAATGGAATGGTATAAGTTTAGTGAAAATATAAATGCAGAGTTAGAGGAATATTCCATAATAAGAAAAATTTTAGGATTTAGTTACCATGATTTGCCTTACTACCTCAAGTCATGTTTCTTGTATTTTGGATTATATCCTGAAGACTATAAAGTTCATTCAAAGACATTGACTCGACAATGGATTGCTGAAGGGTTTGTGAAACAATATGGGGAAAGAACGATGGAAGAGGTTGCAGAAGGATATTTAAAAGAGTTAATACATAGAAGTTTGGTGCAAGTAGATTCAATCAGTATTGATGGAAGAGTAAAACGTTGTCGTGTTCATGATCTAGTGCATGAAATGATCCTTGAAAAACATAAGCATTTAAGCTTTTGCGAGAATATTACTGAGGGCAAACAATTGTCTTTAACTGGAATGATTCGACGCCTATCAATAGCACCCAATTATGATAATCGAATGGAAGGTATTGAAAGCTCACATGTTCGATCATTGCTTGTTTTCGAACCTCAAAGATCACTTGAATCCTTTGTAAAGACGATCCCTACAAAATATAGGCGGTTGAAGGTGCTTGCTTTGAGCAACCGTGAACGGCTTGAAGTTCCTAAGGATTTGGGAAGTTTGAACCACTTGAAATATTTTGGGTTCTTTGTGATTGGAGAAACATATCCTATATTTCCAAAAATTCCAAAATCCATTGGCATGCTCGTGAACCTAGAGACTTTGGATTTAAGATCTCCAAAATTTGAACATCCTAATATGCCGAAGGAGATTTGCAAGCTTAGAAAGCTACGCCATTTATTAGGCAACTTTATGTCTTTGATTCAGTTGAAGGATGGTATTGGAGGCATGACATCGCTACAAACTCTAAATAGTGTTTATTTAGATGATTATGAAGATGAAAATGATAATAGAGTTGTAGAGTTAATAGAAGAGCTGGGAAAACTAAAGCAGCTTAGGGAATTGAGCTTGAGCGGTCTTAAGAGTAAATATATGAGTGGTATATCTTCCTCAATCAATGAGATGCAAAAATTGGAGAAACTAAGTATTAAAGGAGTCGGAATCGGAATGGGATATGGCGCATTCATTGATCTTGATTTGAATTCACCCCCACCTATGCTTCAACGTGTTAAACTTCAAGACCTTAAATTAAATAAGTTGCCTGAGTGGATTTCAAAACTCCAAAATCTTGTCAAGCTGAATGTAAGCCTTACGAGGGAAGTGAATGATGCAATGAAATTACTCCAAAGTATGCCAAATTTGTTGTCCCTCGAATTCTTTGAGGAAGGAAATTATGAAGTGGAAAGTTTACATTTCCAAGATGGATGGTTTAAGAACTTGAAGGAACTATATCTTGCTAATTTCTTCAATTTGAGTCACATCCTAATTGACGAAGGTGCATTGGGTTCTCTGAAAAAGCTCACTTTTGACGCCATCTTCCAACTGATGACTTTACCAACTGGCATTCAACACTTACACAAGCTTGAAGTTCTCAGTGTTTTTTATGCGAGTGATGGACTTATACAGAGCATTGATGATGGAGAAGAGCAATTGTTCTCTATAGAAACTATGTAA 2787 0.3667 MCDCKDALACARDHLLPLARDHLLPFLKEAFNMIRGVPKEIEELQEELERIEVFINDADKRADDVEDKKIKDMIKQLIEASFHIEDVIDDYIFLEEQHAPDPGCAAGVTNCVKTMAFRLQIAYKIQNIKSRISEINDTRTEKDHGFYIQSSSDKASTSYATNRNASLFQNLRDAPLYMVEADVVGFDKTRDKLIDFLVAGRADRTIVSIVGMGGLGKTTLAKKVFDNPKVVKHFDRRVWITVSRPYNTEKVLRDIMLEFYKQQRKVPPQSLRQMDRQSLVDEVRNYLQEKRYVVVFDDVWESHFLHDIEFAMIDNKKGSRILITTRNMDVANTCKKSSFVEVYELKGLTVEQSFELFNKKAFHDLNGRCPENLIDISSKIVKKCKGLPLAIVVIGGILAPKDKIPMEWYKFSENINAELEEYSIIRKILGFSYHDLPYYLKSCFLYFGLYPEDYKVHSKTLTRQWIAEGFVKQYGERTMEEVAEGYLKELIHRSLVQVDSISIDGRVKRCRVHDLVHEMILEKHKHLSFCENITEGKQLSLTGMIRRLSIAPNYDNRMEGIESSHVRSLLVFEPQRSLESFVKTIPTKYRRLKVLALSNRERLEVPKDLGSLNHLKYFGFFVIGETYPIFPKIPKSIGMLVNLETLDLRSPKFEHPNMPKEICKLRKLRHLLGNFMSLIQLKDGIGGMTSLQTLNSVYLDDYEDENDNRVVELIEELGKLKQLRELSLSGLKSKYMSGISSSINEMQKLEKLSIKGVGIGMGYGAFIDLDLNSPPPMLQRVKLQDLKLNKLPEWISKLQNLVKLNVSLTREVNDAMKLLQSMPNLLSLEFFEEGNYEVESLHFQDGWFKNLKELYLANFFNLSHILIDEGALGSLKKLTFDAIFQLMTLPTGIQHLHKLEVLSVFYASDGLIQSIDDGEEQLFSIETM* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1424 928 Coils Coil 41 61 - -
Mtr3g1424 928 Pfam Rx N-terminal domain 22 99 IPR041118 -
Mtr3g1424 928 Gene3D Ribonuclease Inhibitor 557 928 IPR032675 -
Mtr3g1424 928 PANTHER DISEASE RESISTANCE PROTEIN RP 41 883 IPR044974 GO:0006952
Mtr3g1424 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 447 IPR027417 -
Mtr3g1424 928 CDD RX-CC_like 54 135 IPR038005 -
Mtr3g1424 928 PANTHER - 41 883 - -
Mtr3g1424 928 Gene3D - 18 125 - -
Mtr3g1424 928 Pfam NB-ARC domain 188 434 IPR002182 GO:0043531
Mtr3g1424 928 Gene3D - 173 342 IPR027417 -
Mtr3g1424 928 Gene3D - 347 432 IPR042197 -
Mtr3g1424 928 Gene3D - 433 524 IPR036388 -
Mtr3g1424 928 PRINTS Disease resistance protein signature 206 221 - -
Mtr3g1424 928 PRINTS Disease resistance protein signature 286 300 - -
Mtr3g1424 928 PRINTS Disease resistance protein signature 384 398 - -
Mtr3g1424 928 PRINTS Disease resistance protein signature 718 734 - -
Mtr3g1424 928 SUPERFAMILY L domain-like 511 905 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1424 Mtr-Chr3 25572295 25577110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1424 203 405 WRKY Transcription Factor Family AT5G45050 28.079 1.06e-11 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1424 K13457 - gmx:100819372 790.03