Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1417 ATGCCAAGTGTTCAACAAAATCCATCCGACAAAGACACAGAAACATTTGTTGAAACTGATCCAACTGGAAGATATGGAAGATACGATGAATTACTTGGAGCTGGTGCTTGTAAAAAAGTCTATAAAGCATTTGATAATGAAGAAGGAATAGAAGTAGCATGGAATCAAGTTAAGCTCAGAAATTTCAGCAATGACCCTGCAATGATTGAAAGACTTTACTCTGAAGTGAGACTTCTTAAAAACATGACAAACAAAAACATCATTGCACTTTACAATGTTTGGAGGGATAAGGAGCATAACACACTGAATTTCATCACTGAGGTTTGTACAAGTGGGAATTTGAGGGAGTATAGGAAGAAACATAAACATGTTTCTCTTAAGGCTTTGAAGAAGTGGTCTAAACAAATATTGGAAGGGTTGAATTATTTGCATGTTCATGATCCTTGTATCATCCATAGAGACCTCAATTGCAGTAATGTGTTTGTCAATGGAAATACTGGCCAGGTTAAGATTGGTGACTTAGGTTTGGCAGCAATTGTGGGAAAGAACCACTCAGCACATTCAATTCTAGGCACACCGGAATTTATGGCACCAGAGCTATATGAAGAGAATTACACAGAAATGGTAGACATATACTCATTTGGAATGTTAGTATTAGAGATGGTGACACTTGAAATTCCATATAGTGAATGTGACAATGTTGCAAAGATATACAAGAAGGTGACTTCAGGTGTGAGACCACAATCCTTGAACAAGATAAAAGATGCTGAAGTCAAGACTTTCATCGAAAAGTGTCTTGCTCAATCAAGGGCTAGACCTTCTGCTGAGGAATTGCTAAAGGATCCTTTTTTTGATGATGTAGAGTACGATGAAAACGACGATGTTGATTACTAA 894 0.3714 MPSVQQNPSDKDTETFVETDPTGRYGRYDELLGAGACKKVYKAFDNEEGIEVAWNQVKLRNFSNDPAMIERLYSEVRLLKNMTNKNIIALYNVWRDKEHNTLNFITEVCTSGNLREYRKKHKHVSLKALKKWSKQILEGLNYLHVHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHSAHSILGTPEFMAPELYEENYTEMVDIYSFGMLVLEMVTLEIPYSECDNVAKIYKKVTSGVRPQSLNKIKDAEVKTFIEKCLAQSRARPSAEELLKDPFFDDVEYDENDDVDY* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1417 297 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1417 297 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1417 297 CDD STKc_WNK 24 284 - -
Mtr3g1417 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 295 - -
Mtr3g1417 297 MobiDBLite consensus disorder prediction 1 20 - -
Mtr3g1417 297 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
Mtr3g1417 297 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 1 295 - -
Mtr3g1417 297 SUPERFAMILY Protein kinase-like (PK-like) 21 285 IPR011009 -
Mtr3g1417 297 PIRSF TyrPK_CSF1-R 27 131 - -
Mtr3g1417 297 PIRSF TyrPK_CSF1-R 80 280 - -
Mtr3g1417 297 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1417 Mtr-Chr3 25472151 25473153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1417 6 287 MAP Kinase Kinase Kinase AT5G55560 80.142 8.75e-179 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mtr3g1417 Pkinase 3.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1417 K08867 - gmx:100782039 509.605