Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1412 ATGTGTGACACTGTGATCTCCTTTGCTTTCGATCAGTTGCTTCCGTTAGCTCGGGACCATTTGCTTCCACTATTAAAGGAAGTAACCAATATGATAAGAGGTGTCCCAAAAGAAGTTGCAGACATGAAAAATGAACTAGAAAGCATTGAAGACTTCATCAACAATACAGATAGAATGACCGAAGCTGAAGAAGACAATACGCGCGACGGAATCAAAGCAAAGATCAGACAGCTGAGAGAAGCATCTTTTCAGATACAAGATGTCATTGATGAATATATGATATGTGAGGGACAACAGCCTCATGATCCTGGATGTGCAGCTTTGCTTCCTGTGACTAAAGACTTTTTCAAAACCAGGATTCTTCGTCTACAAATAGCTTACAAGATTCAGGACATTAAGTCACTAGTTAGTGCAATGGATGATACTGGTGGAAAAAACCATGGATTCTTCCAAATCAAATCATCTTTGACACGAGGATCAAGTAGTTCTGCAGCAACTGAAAACACCATATTGAACAACCTTAGAGAGGCTCCATTTTACATTGGAGAAGCTCAAGTTGTGGGATTCGAAGCCCCAAGGGATGAATTGGTTAATTTGTTGATAGATGGAAGAAAAGAGCTCACTGTTGTCTCGGTGGTTGGGATGGGAGGGCAAGGTAAAACAACTCTTGCCAAGCAAGTTTTTGACAGCAAAGAGGTTATTGGATACTTTGATTGTCGTGTATGGATCACAGTGTCTCGACACACAGTTGAAGGATTGCTGAGGGACATGTTGCAAAACATTTACAAACAAACAGAAGAAGATCTTCCTTGTAGAATTTCTGAAATGGATCGAAGGTCGTTAATTGATAACGTGAGAAACTTCTTGCAAAACAAAAGGTATATCATCTTCTTTGATGAAGTGTGGAATGAGCAATTTTGGAATGATATTGGATTTTCTTTGATTGATAGTAAAAAAGGAAGTAGGGTATTAATCACAACTAGGAAGATTGATGTTGCCATGTCTTGTAAGAGGTCTTCGTTTTTTCTTGAAGTGCATGAGTTGAAACCTTTGAGTCATGAAAAATCTTTGGAGCTTTTTTATAAGAAGGCATTCTTTGACTTAAATGACTTGAATGGACCATGTCCTAAAAACCTTATGAATGTATCTTCTAAAATTGTTGAAAAATGTGAGGGTCTGCCACTTGCAATTGTGGCTATTGGTGGTCTTTTATCTACCAAAGAAAGATATTCACATCAATGGGAAAGGTTTAGTGAAAATTTGAGTTCAGAGTTGGACAACAATCCCAGTATACATGTTATAACAAAGATTTTAGGGTTTAGTTTTCATGATTTACCTTACAATCTCAAACAATGCTTCTTATACTTTGGAATATTTCCTGGAAACTATGAAGTTAACACCATGAAACTAATTAAACAATGGGTAGCGGAAGGGTTTGTCAAAGAGGAAACAGGAAAAACGGTGGAAGAAATTGCGGAACAATATTTAACAGAGTTGATCCATAGAAGGTTGGTTCTTGTATCTTCTTTTTCAAGTAATAGCAAAGCTAGAAGTTGTCATGTTCGTGGCTTAATACGAGAAATGATCCTTGATAAAATTCAGGACCTAAGCTTTTGCAACTTTACTCAAGATAATGAGGACCAGTCAGTCCTAAGCTTGATGACTCGTCGCCTAACAATATCAACCAGTTCCAACACTTTACTGTCAAGAAATGTTGAATGCTCAAACATTCGGTCACTGCATGTTTTCAAAAATGAAGAGTTACCAGATTCCTTTGTGGCAAGTATCCCTTCAAAGTTCAAATTACTAAAAGTATTTGATTTTGAAGATGTTGCGCTACATCATTATGTTCCAAAAAATTTAGGGGATTTATTCCATTTGAGATATTTAAGCTTTAGAAATACAAAAGTAAGGTATCTCCCAGGATCTATTGGTAAGCTTCATAACCTAGAGACCTTAGATTTAAGGCAAACTATGGTGCGCAAGTTACCAAAAGAGATTAACAAGCTTCAAAAGTTAAGGCACCTTCTAGCTTATGATAAGTCTAAAGGTGTTGGATATGGAATTCAACTGAATGATGGCATTGGCATTGGAGACATAGTGTCCCTACAAACGCTACGCGAAGTGGAAGCAGATGATGGCGGAGTTGAGCTGATTACCGATCTTGAGAGGCTCAAGCAGTTAAAAATGTTGGGGTTGACTAATGTTAAGCAAGAATACACAGAAGCTGTATGTTCTTCCATAAACGAGATGCAACACTTGGAGAAGCTATACATTGCTGCAATAAATAAAGATGAAGTCATTGATTTTTCAAATTTTGATGTATCATTACATAAACTTCAGAAGCTTCGCCTAGTAGGGAAGTTGGAGAGGTTTCCATATTGGATTAGAGAGCTTCAAAACCTTGTTAAATTGTCTTTGTCATATTCCATGTTAACTCATGATCCATTGAAATCATTGACAGATCTTCCGAATTTGTTATGCCTTAGCATCCTCTTTCGTGCATATGAAGGTGAACATTTGCATTTTCAAGATGAAGGGTTTAAGAGTCTCAAGCAACTGGTATTTAGGCGCTTGTATAATTTGAAATCCATCAAAATTGGTAAAGGAGCATTGTCCTCTCTTGAGAAGTTCAAGTTAGTTAATATTCCACAACTGATGGAGGTGCCTTCTGGTGTCTACAACTTGCCCAGGCTAGTTTGTCATATCATAAACATGACTGATGAGTTTGAGCAAAGCATTGATCGTGTTCGAGGACAACATCAATGGATCATAGAGAAGGTTCCATGTGTAGGAATAGTTGACCGAAGTTGGGCACCTGAAAATGTCTAA 2832 0.3754 MCDTVISFAFDQLLPLARDHLLPLLKEVTNMIRGVPKEVADMKNELESIEDFINNTDRMTEAEEDNTRDGIKAKIRQLREASFQIQDVIDEYMICEGQQPHDPGCAALLPVTKDFFKTRILRLQIAYKIQDIKSLVSAMDDTGGKNHGFFQIKSSLTRGSSSSAATENTILNNLREAPFYIGEAQVVGFEAPRDELVNLLIDGRKELTVVSVVGMGGQGKTTLAKQVFDSKEVIGYFDCRVWITVSRHTVEGLLRDMLQNIYKQTEEDLPCRISEMDRRSLIDNVRNFLQNKRYIIFFDEVWNEQFWNDIGFSLIDSKKGSRVLITTRKIDVAMSCKRSSFFLEVHELKPLSHEKSLELFYKKAFFDLNDLNGPCPKNLMNVSSKIVEKCEGLPLAIVAIGGLLSTKERYSHQWERFSENLSSELDNNPSIHVITKILGFSFHDLPYNLKQCFLYFGIFPGNYEVNTMKLIKQWVAEGFVKEETGKTVEEIAEQYLTELIHRRLVLVSSFSSNSKARSCHVRGLIREMILDKIQDLSFCNFTQDNEDQSVLSLMTRRLTISTSSNTLLSRNVECSNIRSLHVFKNEELPDSFVASIPSKFKLLKVFDFEDVALHHYVPKNLGDLFHLRYLSFRNTKVRYLPGSIGKLHNLETLDLRQTMVRKLPKEINKLQKLRHLLAYDKSKGVGYGIQLNDGIGIGDIVSLQTLREVEADDGGVELITDLERLKQLKMLGLTNVKQEYTEAVCSSINEMQHLEKLYIAAINKDEVIDFSNFDVSLHKLQKLRLVGKLERFPYWIRELQNLVKLSLSYSMLTHDPLKSLTDLPNLLCLSILFRAYEGEHLHFQDEGFKSLKQLVFRRLYNLKSIKIGKGALSSLEKFKLVNIPQLMEVPSGVYNLPRLVCHIINMTDEFEQSIDRVRGQHQWIIEKVPCVGIVDRSWAPENV* 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1412 943 CDD RX-CC_like 19 134 IPR038005 -
Mtr3g1412 943 Gene3D Ribonuclease Inhibitor 530 683 IPR032675 -
Mtr3g1412 943 Gene3D - 168 345 IPR027417 -
Mtr3g1412 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 456 IPR027417 -
Mtr3g1412 943 PANTHER - 31 906 - -
Mtr3g1412 943 Pfam NB-ARC domain 193 443 IPR002182 GO:0043531
Mtr3g1412 943 PRINTS Disease resistance protein signature 209 224 - -
Mtr3g1412 943 PRINTS Disease resistance protein signature 288 302 - -
Mtr3g1412 943 PRINTS Disease resistance protein signature 390 404 - -
Mtr3g1412 943 PRINTS Disease resistance protein signature 645 661 - -
Mtr3g1412 943 SUPERFAMILY L domain-like 534 904 - -
Mtr3g1412 943 Gene3D Ribonuclease Inhibitor 698 924 IPR032675 -
Mtr3g1412 943 Gene3D - 350 441 IPR042197 -
Mtr3g1412 943 Gene3D - 16 126 - -
Mtr3g1412 943 Gene3D - 442 529 IPR036388 -
Mtr3g1412 943 Pfam Rx N-terminal domain 20 101 IPR041118 -
Mtr3g1412 943 PANTHER DISEASE RESISTANCE PROTEIN RP 31 906 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1412 Mtr-Chr3 25416099 25419672 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1412 206 409 WRKY Transcription Factor Family AT5G45050 28.708 1.99e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1412 K13457 - gmx:100782760 852.047