Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1406 ATGGCGGAAATGGTGGTGTCTTTAGTTATTGACCAACTAGTTCCATTGTTAAGGGATGAAGCCAAGCTGTTGAGAGGCGTTCACAAGGAATTTGCAGACCTTAAAGATGAACTTGAAAGCATCCAAGCCTTCCTCAAAGATGCTGATAGAAGAGCTGCAGCTGATGGGGACAACACTAGTGAAGGAGTCAAAACATGGGTGAAGCAACTTAGGGTAGCAGCTTTTCGCATAGAAGATATCATTGATGAGTATATGATCCATGTAGGACAGCAGCCTCGTGATCCTGGATGTGTAGCTATACTTGATAAGATTGCTCACTTACTCAAAACTATGACCCCTCGCCATCGAATAGCAGCTGAGATTCAAGATGTTAAGTCATCTGTTCGTGGGATCAAGGAAAGAAGTGAACGATATGGCTTCCAACCTTCTTTTGAACAAGGATCAAGCAGTTCAAGAGAAAACCGAAATGCCAAATGGCACGACCCTCGAGTTGCTGCTCTTTACATTGAGGAAGCTGATGTTGTGGGATTCAAAGCACCAAGAAAAAGATTGATTGATTGGATGGTAAAGGGAACGGAAGAGCGCACTGTAGTTTCGGTGGTAGGAATGGGAGGGCAAGGAAAAACAACTCTAGCCAAGAGAGTTTTTGACAGCAAGGATGTAATTGGACACTTTGATTGTCATGTTTGGATCACAGTGTCGCAGTCCTATAATGTTGAAGGGATTTTGAGGGACATGTTGCGAAAGCTTCACCAACAAAAAGGGAGCAGTCCTCCTATGAACATTTCTGAAATGGATAGAGATTCATTGACGGATGAAGTGAGAAAATACTTGCGCCAAAAGAGGTACATTGTGGTGTTTGACGATATTTGGAGCAAACATTTTTGGGAATATTTTCAATTTGCTGTATTTGATAATAAAAAAGGAAGTAGGATACTTATAACAACAAGGAACCTGGATGTTGCGGTGTCAAAATCTTCTTCCATTGAGTTGCATGGTTTAACTCCTGAGGAGTCTTTGGAGTTGCTCAATAAGAAGGTATTCAAATTTGATTGTGATGGGTGTTGTCCAAAAGAGCTCATTGGTATAGCTAATGACATTGTTAAAAAATGCAATGGTTTACCGCTAGCAATTGTTGCCATAGGTGGCCTTTTATCTACAATAGAGAATAGTGTGTTTGAGTGGCAGAGATTTAGAGAACATCTGAATTCAGAGCTAAAGACAAATGCACATCTAATTGGGATAGAAAAAATTTTAAGTTTAAGTTATGATGATTTGCCTTACTATCTCAAGTCATGCTTGTTGTACTTTGGAGTATATCCAGAAGATTATGAAGTTAAATCGAAGAGAGTGACTCGACAATGGATAGCTGAAGGGTTTGTGAAGGAGGAAAAGGGGAAGACTTTGGACGAAGTGGCAGAAGGATATTTAACAGAGTTGATCCATAGAAGCCTGGTTCAAGTATCCTCGCTTAGAATTGATGGCAAAACTAAAGGTTGTCGTGTTCATGATCTAATACGTGATATGATCCTTGCAAAGAATGAGGATTTTAATTTTTGCAAGCATATTAGTGATGATGGACAGACATCCTTAGGTGGAATAGTTCGGCGCCTATCAATAACAACCATTGACGATGTTTTGAGGGAGTGCATTGATCAATCTCATGTTCGGTCACTATTTTTTTTTGGAAATAAAGTAATATCCTTGAAATTGTTAGTTTCAGTAGAAATCCCTACAAAGTACAAGTTATTGAAGGTTGTTGATTTGGAAGATGTTTTCAACAATATTCCTAATAACTTGGGAAATTTCACCCACTTAAAGTATTTAAGTATGCATTTGAAGATCACAATTGATGAAGTCCCAAAATCCATTGGCATGCTCCAGAACCTAGAGACATTGGTTCTAAGGGGTTTCGGTGTTTTTGAGTTGCCAAAGGAGATTAGAAAGCTTAGAAAGCTAAGGCACCTTATCGGGTACCGACTATCTTTGATTCAATTAAAGGATGGTATTGGAGAGATGAAGTCCCTACAAACTCTGCGTCGTGTTTCTTTAGATATGGATGGAGCAGCGGAGGTAATTAAAGCGTTAGGAAAGCTGAAGCTGATAAGGGATTTGGGGTTGGTTGATGTTCCTAAGGAAAATGAAAGCATTTTATCTTCCTCAATCAAAGAAATGCAGCAATTGGAGAAACTAAGAGTTCTTAATTTTAAAGATGATAACTTTGTTGATTTGAATTTGATTTCACTGCCAACTATGCTTCAAAAACTTATACTACAAGGGCCGTTAAAGGAGTTTCCAAAATGGATGTTAGATCTACAAAATCTTACTGTGTTGAGGTTGGCGTGGCCGTGTTCAGATAAAGATCCATTGCAATCACTAAAAAGTTTGCAACACTTGTTGAGCTTGTACTTAGACCTGAGTGAGTATGAAGGTTTACAATTGCATTTTCAAGATGGATGGTTTCAGAAATTAAAGGGACTGGTGGTTTTATATTCATCTAGAGTGAGAGAAATTATTATCGATAAAGGATCAATGCCTTCTTTGAAAATTCTTAAGGTAATAAAATTTCCTAATCTGAAGAATATACCCACTGGCATCCAACACTTGGAGAAGCTTGAATTTATCTATATTACCGAGGTGGATGATAAAATTGAGAAGCGCAGTTCTGCTGAGGATTGGAATTGGATCATGGAGCATGTGCCCTCTGTAACAATTTATTCTAATGAACTTCAGGGAGTTAGAAATCTGGCTCTATCATACTCCAGGTGA 2769 0.3868 MAEMVVSLVIDQLVPLLRDEAKLLRGVHKEFADLKDELESIQAFLKDADRRAAADGDNTSEGVKTWVKQLRVAAFRIEDIIDEYMIHVGQQPRDPGCVAILDKIAHLLKTMTPRHRIAAEIQDVKSSVRGIKERSERYGFQPSFEQGSSSSRENRNAKWHDPRVAALYIEEADVVGFKAPRKRLIDWMVKGTEERTVVSVVGMGGQGKTTLAKRVFDSKDVIGHFDCHVWITVSQSYNVEGILRDMLRKLHQQKGSSPPMNISEMDRDSLTDEVRKYLRQKRYIVVFDDIWSKHFWEYFQFAVFDNKKGSRILITTRNLDVAVSKSSSIELHGLTPEESLELLNKKVFKFDCDGCCPKELIGIANDIVKKCNGLPLAIVAIGGLLSTIENSVFEWQRFREHLNSELKTNAHLIGIEKILSLSYDDLPYYLKSCLLYFGVYPEDYEVKSKRVTRQWIAEGFVKEEKGKTLDEVAEGYLTELIHRSLVQVSSLRIDGKTKGCRVHDLIRDMILAKNEDFNFCKHISDDGQTSLGGIVRRLSITTIDDVLRECIDQSHVRSLFFFGNKVISLKLLVSVEIPTKYKLLKVVDLEDVFNNIPNNLGNFTHLKYLSMHLKITIDEVPKSIGMLQNLETLVLRGFGVFELPKEIRKLRKLRHLIGYRLSLIQLKDGIGEMKSLQTLRRVSLDMDGAAEVIKALGKLKLIRDLGLVDVPKENESILSSSIKEMQQLEKLRVLNFKDDNFVDLNLISLPTMLQKLILQGPLKEFPKWMLDLQNLTVLRLAWPCSDKDPLQSLKSLQHLLSLYLDLSEYEGLQLHFQDGWFQKLKGLVVLYSSRVREIIIDKGSMPSLKILKVIKFPNLKNIPTGIQHLEKLEFIYITEVDDKIEKRSSAEDWNWIMEHVPSVTIYSNELQGVRNLALSYSR* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1406 922 Gene3D - 333 422 IPR042197 -
Mtr3g1406 922 Gene3D Ribonuclease Inhibitor 535 911 IPR032675 -
Mtr3g1406 922 Pfam NB-ARC domain 182 425 IPR002182 GO:0043531
Mtr3g1406 922 Gene3D - 423 514 IPR036388 -
Mtr3g1406 922 CDD RX-CC_like 2 133 IPR038005 -
Mtr3g1406 922 SUPERFAMILY L domain-like 501 879 - -
Mtr3g1406 922 Gene3D - 161 331 IPR027417 -
Mtr3g1406 922 PANTHER DISEASE RESISTANCE PROTEIN RP 30 879 IPR044974 GO:0006952
Mtr3g1406 922 Coils Coil 31 51 - -
Mtr3g1406 922 PANTHER - 30 879 - -
Mtr3g1406 922 Gene3D - 5 118 - -
Mtr3g1406 922 PRINTS Disease resistance protein signature 197 212 - -
Mtr3g1406 922 PRINTS Disease resistance protein signature 277 291 - -
Mtr3g1406 922 PRINTS Disease resistance protein signature 371 385 - -
Mtr3g1406 922 PRINTS Disease resistance protein signature 726 742 - -
Mtr3g1406 922 Pfam Rx N-terminal domain 5 94 IPR041118 -
Mtr3g1406 922 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 437 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1406 Mtr-Chr3 25269815 25273226 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1406 197 382 WRKY Transcription Factor Family AT5G45050 31.443 1.75e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1406 K13457 - gmx:100819372 873.233