Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1403 ATGAAAAAGGGACAAAACATTGAAAAACCGAAGATCACAGAAAGAAGTGAAAGATATGGCTTCCAACGTTCTTTTGAACAAGGAACAAGCAATTCTAGAGGAAGCAGGAATGCCAAATGGAACGACCCTCGAGTGGCTGCTCTTTACATCGAGGAAGCTGAGGTTGTGGGATTTGAAGCGCCAAGAAAAAGATTGACTGATTGGTTGGTACAGGGAAGGGAAGAGCGCACTGTGGTGTCTGTGGTAGGAATGGGAGGGCAAGGAAAAACAACTCTAGCCAAGAAAGTTTTTGACAGCAAGGATATCATGGGACACTTTGATTGTCGTGTATGGATTACAGTGTCTCAATCATATAATTCTGAAGGATTGTTGAGAGACATGTTGCTAAAGGTTTGCAAACAAAAAGGAGTGACACTTCCCGAGGGTATTTCTCAAATGAATCGGGAGTCATTGACTGATGAAGTGAGAAATCACTTGCGGAAATCGAGGTACCTTGTCGTCTTTGATGATGTTTGGAATGAATTTTTTTGGAATGATATTAAATATGTTGCAATTGATTGTAAAAATGGAAGTAGGATATTTATAACAACAAGGAAAAAGAATGTTGTGGTGTCTTGTAAAGAGTCTTCTTTTATTGAGGTGCATGAACTGCAACCTTTAACTCTAGAACAATCTTTGGAGTTGTTCAATAAGAAAACATTCAAAATTGATTGTGATGGGTGTTGTCCAAACGAGCTCATTGGTATAGCTGATGAAATTGTTAAAAAATGCAGTGGTTTACCGCTAGCAATTGTTGCCATCGGTGGCCTTTTATCTACAAGAGAGAAAAATGTGTTTGAGTGGCAGAAATTTAGAGAACATCTGAATTCAGAGCTAAACACAAATGCACATCTAATTGGGATAGAAAAAATTTTAAGTTTAAGTTATGATGATTTGCCTTACTATCTCAAGCCATGCTTGTTGTATTTTGGAGTATATCCAGAAGATTATGAAGTTAAATCAAAGAGAGTGATTCGACAATGGATAGCTGAAGGGTTTGTAAGGGAGGAAAAGGAGAAGACTTTGCAAGAAGTGGCAGAGGGATATCTCATAGAGTTGATCAATAGAAGCCGGGTGCAAGTATCTTCACTTAAAATTGATGGCAAAGCTAAAGGATGTCGTGTTCATGATCTAATACGCAATATGATCCTTGAAAAAAGTGAGGATTTTAATTTTTGCAAGCATGTTAGTGATGATGGGCAAACATCCTTAAGTGGAATAGTTCGGCGCCTGTCAATAACAACCATTGACGATGTTTTCAAGGAGTGTATTGACAAATCTCATGTTCGGTCCCTATTTTGTTTTGGTATTAAACGAATGTCCCCGTCCTTTGATAGAGGAATCCCCACAAAGTACAGGTTACTGAAGGTTTTTGATTTTGAAGATTTTGTTATGAATAATATTCCTATGAATTTGGGAAATTTCATCCACTTGAAGTATTTAAGCATAATGATGTCAATTAATGCAGTTGAAGTAGTCCCAAAATCCATTGGCATGCTCCAGAACCTAGAGACCTTGGTTCTAAGGGGTCGATATTATTTTGAGTTGCCAAAGGAGATTAGGAAGCTTAGAAAGCTAAGACATCTTATCGGCACTGAACTGTCATTGATTCATTTAAAGGATGGTATTGGAGAGATGAAGTCCCTACAAACTCTGCGTTATGTTTCTTTAAACATGGATGGAGCAGCAGAGGTAATTAAAGCGCTAGGAAAGCTGAAGCTGATAAGGGATTTGGGGTTGCTTAATGTTCCTAAGGAAAATGAAAGCATTTTCTCTTCCTCAATCAATGAAATGCTGCACTTGGAGAAACTAAGTGAATAA 1860 0.3796 MKKGQNIEKPKITERSERYGFQRSFEQGTSNSRGSRNAKWNDPRVAALYIEEAEVVGFEAPRKRLTDWLVQGREERTVVSVVGMGGQGKTTLAKKVFDSKDIMGHFDCRVWITVSQSYNSEGLLRDMLLKVCKQKGVTLPEGISQMNRESLTDEVRNHLRKSRYLVVFDDVWNEFFWNDIKYVAIDCKNGSRIFITTRKKNVVVSCKESSFIEVHELQPLTLEQSLELFNKKTFKIDCDGCCPNELIGIADEIVKKCSGLPLAIVAIGGLLSTREKNVFEWQKFREHLNSELNTNAHLIGIEKILSLSYDDLPYYLKPCLLYFGVYPEDYEVKSKRVIRQWIAEGFVREEKEKTLQEVAEGYLIELINRSRVQVSSLKIDGKAKGCRVHDLIRNMILEKSEDFNFCKHVSDDGQTSLSGIVRRLSITTIDDVFKECIDKSHVRSLFCFGIKRMSPSFDRGIPTKYRLLKVFDFEDFVMNNIPMNLGNFIHLKYLSIMMSINAVEVVPKSIGMLQNLETLVLRGRYYFELPKEIRKLRKLRHLIGTELSLIHLKDGIGEMKSLQTLRYVSLNMDGAAEVIKALGKLKLIRDLGLLNVPKENESIFSSSINEMLHLEKLSE* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1403 619 PRINTS Disease resistance protein signature 78 93 - -
Mtr3g1403 619 PRINTS Disease resistance protein signature 158 172 - -
Mtr3g1403 619 PRINTS Disease resistance protein signature 257 271 - -
Mtr3g1403 619 PRINTS Disease resistance protein signature 511 527 - -
Mtr3g1403 619 Gene3D Ribonuclease Inhibitor 428 618 IPR032675 -
Mtr3g1403 619 PANTHER - 26 616 - -
Mtr3g1403 619 MobiDBLite consensus disorder prediction 1 38 - -
Mtr3g1403 619 Pfam NB-ARC domain 62 311 IPR002182 GO:0043531
Mtr3g1403 619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 323 IPR027417 -
Mtr3g1403 619 SUPERFAMILY L domain-like 387 617 - -
Mtr3g1403 619 Gene3D - 309 400 IPR036388 -
Mtr3g1403 619 Gene3D - 42 214 IPR027417 -
Mtr3g1403 619 MobiDBLite consensus disorder prediction 22 38 - -
Mtr3g1403 619 Gene3D - 220 308 IPR042197 -
Mtr3g1403 619 PANTHER DISEASE RESISTANCE PROTEIN RP 26 616 IPR044974 GO:0006952
Mtr3g1403 619 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1403 Mtr-Chr3 25223978 25227466 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1403 79 268 WRKY Transcription Factor Family AT5G45050 29.293 6.09e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1403 K13457 - gmx:100819372 662.144