Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1401 ATGGCAGAAATGGCTGTGTCTTTTGCTATTGACCAACTTCTTCCGTTGTTGACAGAAGAAGTCAATCTTCTCAAAGGTGTTCACAAGGAATTTGGAGACATTAAAGATGAACTTGAAAGCATCCAAGCCTTCCTTAAGGATGCTGATAGAAGAGCTGCAGCTGATGGAGAGAACAATAGTGAAGGAGTTAAAACTTGGGTGAAGCAGCTTAGGGAAGCAGCTTTTTGCATAGAAGATATCATTGATGAATATATGATCCATGTAGGACAGAAGCCTCATGGTCATGGATGTGTAGCTTTACTTCATAATATTTCTCACTTACTCAGAACCATGACCTCTCGCCATCGAATAGCAGCTGAGATTCAAGACATTAAGTCATCTGTTCGTGGGATCAAGGAAAGAAGTGATAGATATAGTTTCCAACGTTCTTTTGAACAAGGATCAAGCAGATCCAGGGGAAGCTGGAATGACAAATGGCACGACCCTCGACTGGCTTCTCTTTACATTGAAGAAGCTGACGTTGTGGGCTTTGACAAACAAAGGGACATTTTGATTGATTGGATGATAAAGGGAAGGGCAGAGCGCACTGTTGTTTCTGTGGTAGGAATGGGAGGGCAAGGAAAAACCACTCTAGCTAAGAAAGCTTTTGACAGCAAGGATGTCGTTGGACACTTTGATTGTCGTGTATGGATCACAGTGTCTCAAGCATATGATGTTGAAGGGTTGTTGAAGGACATGTTGCTCAAGTTTTACAAACAAAAAGGAGAGGATCCTCCTATGGGTATTTTTCAAATGGATCGAGGGTCATTGATGGATGAAATTAGAAACTACTTGCGAAGAAAGAGGTACGTTATCGTGTTTGATGATGTTTGGAGTCTACATTTTTGGGATGATATCGAATTTGCTGGAATTGATAGTAAAAATGGAAGTAGGATATTTATAACAACAAGGATAATTGATGTTGTGGTGTCTTGTAAAAAATCTTCTTTCATTGAAGTTCTTGAGTTGCAATGTTTAACTCATGAACAATCTTTGGAGTTGTTCAATAAGAAGGCATTCAAATTTGACTATGATGGGTGTTGTCCAAAAGAGCTAAATGGTATATCTAATGAAATTGTAAAAAAATGCAATGGTTTACCGCTAGCAATTGTTGCCATCGGTGGCCTTTTATCTACAAGAGAGAAAAATGTGTTTGAGTGGAAGAGATTTAGAGAAAATCTAAATTTAGAGTTAAAGAGAAATACACATCTAATTGGGATAAATGAAATTTTAAGTTTAAGTTATGATGATTTGCCTTACTATCTCAAGTCATGCTTGTTGTATTTTGGAGTATATCCAGAAGATTTTGAAATTAGACCAAAGAGAGTCATTCGACAATGGATAGCTGAAGGATTTGTGAAGGAGGAAAAGGGAAAGACTATGGAAGAAGTGGCAGAGGGATATCTAACAGAGTTGATACATAGAAGCCTGGTTCAAGTATCCTCACTTAGAATTGATGGCAAAGCTAAAGGTTGTCGTGTTCATGATCTAATACGTGATATGATCCTTGAAAAAGATGAGGATTTTAATTTTTGCAAGCATATCAGTGATGATGGACAAAGATCCTTAAGTGGAATAGTTCGGCGCCTATCATTAACAGCCATTGACAATGTTTTCATGGAGTGTATTGATGGATCTCATGTTCGGTCACTATTTTGTTTTGGAAATAAAATATCCTTTCCCTTTTATAGAGGAATCCCTACGAAGTACAGGTTATTGAAGGTTCTTGATTTTGAAGGTTTTGTTATGATTCCTAAGAATTTGGGAAATTTCATCCACTTGAAGTATTTAAGCTTCAGCCTGTCAGATTTGTTAGTCAAATTCCCAAAATCCATTGTTATGCTCCAGAACCTAGAGTCATTGGTTCTAAAAGATGCATATAATCTTGTGTTGCCAAAAGAGATTAGCAAGCTCAGAAAGCTAAGACATCTTATCGGCCAAACATTGTCCTTGATTGAATTAAAGGATGGAATTGGAGAGATGAATTCCCTACAAACTCTGCGTAATGTTTATTTGGATTTGGATGATGGAGCAGCAGAGGTAATTAAAGCATTAGGAAAACTGAAGCAGATAAGGGAATTGGGGTTGCTTAATGTTCCTAAGGAATATGGAAGCATTTTATCTTTCTCAATAAATGAAATGCAACACTTGGAAACATTAAACGTTGGATCAAGTGTTGATTTCATTGATTTGAGTTTGATTTCAAAGCCATCTATGCTTCGAAAACTTACACTTCATGTGTGGTTAGAGAAATTTCCACAGTGGATGTCAGATCTTCAAAATCTTAGTGTGTTGAAGTTGTTTTACCCTGATTCTACTAAAGATCCATTGCAATCACTAAAAAATTTGCAACACTTATTGATGTTGTCCTTAGACCTTAGTAAGTATGAAGGTTTAGGTTTGCATTTTCATGATGGAGAGTTTCAGAAACTAAAGGAACTGGAAGTTAGAGGTTGCATTGAATTGAAGGAAATTATTATCGACAAAGGATCAATGCCTTCCCTAAAAAAGCTTAAGTTAGTGCAACCCCTCAATCTGAAGAATATACCTACTGGCATTGAACACTTAGAGAAGCTTGAAGATCTCTATATTTGGGGTGTGGAAGTTGAATTTGTGCAGCGCATTCCTACCGAGGATTGGAATTGGATCATGGAGCATGTGGCGCTTGTAAAAATTTATTCCAGAGTCTGGGAAGAAATTCAAAACTCAAGGAGTTAG 2757 0.3729 MAEMAVSFAIDQLLPLLTEEVNLLKGVHKEFGDIKDELESIQAFLKDADRRAAADGENNSEGVKTWVKQLREAAFCIEDIIDEYMIHVGQKPHGHGCVALLHNISHLLRTMTSRHRIAAEIQDIKSSVRGIKERSDRYSFQRSFEQGSSRSRGSWNDKWHDPRLASLYIEEADVVGFDKQRDILIDWMIKGRAERTVVSVVGMGGQGKTTLAKKAFDSKDVVGHFDCRVWITVSQAYDVEGLLKDMLLKFYKQKGEDPPMGIFQMDRGSLMDEIRNYLRRKRYVIVFDDVWSLHFWDDIEFAGIDSKNGSRIFITTRIIDVVVSCKKSSFIEVLELQCLTHEQSLELFNKKAFKFDYDGCCPKELNGISNEIVKKCNGLPLAIVAIGGLLSTREKNVFEWKRFRENLNLELKRNTHLIGINEILSLSYDDLPYYLKSCLLYFGVYPEDFEIRPKRVIRQWIAEGFVKEEKGKTMEEVAEGYLTELIHRSLVQVSSLRIDGKAKGCRVHDLIRDMILEKDEDFNFCKHISDDGQRSLSGIVRRLSLTAIDNVFMECIDGSHVRSLFCFGNKISFPFYRGIPTKYRLLKVLDFEGFVMIPKNLGNFIHLKYLSFSLSDLLVKFPKSIVMLQNLESLVLKDAYNLVLPKEISKLRKLRHLIGQTLSLIELKDGIGEMNSLQTLRNVYLDLDDGAAEVIKALGKLKQIRELGLLNVPKEYGSILSFSINEMQHLETLNVGSSVDFIDLSLISKPSMLRKLTLHVWLEKFPQWMSDLQNLSVLKLFYPDSTKDPLQSLKNLQHLLMLSLDLSKYEGLGLHFHDGEFQKLKELEVRGCIELKEIIIDKGSMPSLKKLKLVQPLNLKNIPTGIEHLEKLEDLYIWGVEVEFVQRIPTEDWNWIMEHVALVKIYSRVWEEIQNSRS* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1401 918 PRINTS Disease resistance protein signature 197 212 - -
Mtr3g1401 918 PRINTS Disease resistance protein signature 277 291 - -
Mtr3g1401 918 PRINTS Disease resistance protein signature 376 390 - -
Mtr3g1401 918 PRINTS Disease resistance protein signature 819 835 - -
Mtr3g1401 918 PANTHER - 30 881 - -
Mtr3g1401 918 Gene3D Ribonuclease Inhibitor 553 898 IPR032675 -
Mtr3g1401 918 CDD RX-CC_like 2 133 IPR038005 -
Mtr3g1401 918 Gene3D - 434 519 IPR036388 -
Mtr3g1401 918 Gene3D - 165 333 IPR027417 -
Mtr3g1401 918 SUPERFAMILY L domain-like 506 886 - -
Mtr3g1401 918 Pfam Rx N-terminal domain 5 92 IPR041118 -
Mtr3g1401 918 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 442 IPR027417 -
Mtr3g1401 918 Pfam NB-ARC domain 182 430 IPR002182 GO:0043531
Mtr3g1401 918 Gene3D - 4 118 - -
Mtr3g1401 918 PANTHER DISEASE RESISTANCE PROTEIN RP 30 881 IPR044974 GO:0006952
Mtr3g1401 918 Gene3D - 338 432 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1401 Mtr-Chr3 25162818 25167087 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1401 197 514 WRKY Transcription Factor Family AT5G45050 26.625 4.23e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1401 K13457 - gmx:100819372 908.286